RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 CEP41Q9BYV8 373 aa19.62■□□□□ 0.73
PSPC1-203ENST00000471658 SLC2A11Q9BYW1 496 aa19.62■□□□□ 0.73
PSPC1-203ENST00000471658 DRG1Q9Y295 367 aaKnown RBP19.62■□□□□ 0.73
PSPC1-203ENST00000471658 BCLAF3A2AJT9 711 aaKnown RBP19.62■□□□□ 0.73
PSPC1-203ENST00000471658 HACD1B0YJ81 288 aa19.62■□□□□ 0.73
PSPC1-203ENST00000471658 KCNK1O00180 336 aa19.62■□□□□ 0.73
PSPC1-203ENST00000471658 CBX4O00257 560 aa19.62■□□□□ 0.73
PSPC1-203ENST00000471658 NCAM2O15394 837 aa19.62■□□□□ 0.73
PSPC1-203ENST00000471658 KDELR3O43731 214 aa19.62■□□□□ 0.73
PSPC1-203ENST00000471658 PABPC1P11940 636 aaKnown RBP19.62■□□□□ 0.73
PSPC1-203ENST00000471658 BMP1P13497 986 aa19.62■□□□□ 0.73
PSPC1-203ENST00000471658 ETS1P14921 441 aa19.62■□□□□ 0.73
PSPC1-203ENST00000471658 OXCT1P55809 520 aa19.62■□□□□ 0.73
PSPC1-203ENST00000471658 KDSRQ06136 332 aa19.62■□□□□ 0.73
PSPC1-203ENST00000471658 TDGQ13569 410 aa19.62■□□□□ 0.73
PSPC1-203ENST00000471658 CCDC13Q8IYE1 715 aa19.62■□□□□ 0.73
PSPC1-203ENST00000471658 CCDC105Q8IYK2 499 aa19.62■□□□□ 0.73
PSPC1-203ENST00000471658 FAM71DQ8N9W8 422 aa19.62■□□□□ 0.73
PSPC1-203ENST00000471658 GLIS1Q8NBF1 620 aa19.62■□□□□ 0.73
PSPC1-203ENST00000471658 ATL2Q8NHH9 583 aa19.62■□□□□ 0.73
PSPC1-203ENST00000471658 CCDC114Q96M63 670 aa19.62■□□□□ 0.73
PSPC1-203ENST00000471658 FBRSL1Q9HCM7 1045 aaKnown RBP19.62■□□□□ 0.73
PSPC1-203ENST00000471658 SEPT10Q9P0V9 454 aa19.62■□□□□ 0.73
PSPC1-203ENST00000471658 PRKAG3Q9UGI9 489 aa19.62■□□□□ 0.73
PSPC1-203ENST00000471658 KCNN4O15554 427 aa19.61■□□□□ 0.73
PSPC1-203ENST00000471658 PRAMEF11O60813 436 aa19.61■□□□□ 0.73
PSPC1-203ENST00000471658 ZMPSTE24O75844 475 aa19.61■□□□□ 0.73
PSPC1-203ENST00000471658 PEX11BO96011 259 aa19.61■□□□□ 0.73
PSPC1-203ENST00000471658 ZSCAN5DPP0CG00 497 aa19.61■□□□□ 0.73
PSPC1-203ENST00000471658 CCNCP24863 283 aa19.61■□□□□ 0.73
PSPC1-203ENST00000471658 PTGIRP43119 386 aa19.61■□□□□ 0.73
PSPC1-203ENST00000471658 CTSOP43234 321 aaPredicted RBP19.61■□□□□ 0.73
PSPC1-203ENST00000471658 FNTAP49354 379 aa19.61■□□□□ 0.73
PSPC1-203ENST00000471658 PLK1P53350 603 aa19.61■□□□□ 0.73
PSPC1-203ENST00000471658 LINGO4Q6UY18 593 aa19.61■□□□□ 0.73
PSPC1-203ENST00000471658 TICRRQ7Z2Z1 1910 aa19.61■□□□□ 0.73
PSPC1-203ENST00000471658 KIAA0907Q7Z7F0 614 aaPredicted RBP19.61■□□□□ 0.73
PSPC1-203ENST00000471658 ADIPOR2Q86V24 386 aa19.61■□□□□ 0.73
PSPC1-203ENST00000471658 CDKL3Q8IVW4 592 aaPredicted RBP19.61■□□□□ 0.73
PSPC1-203ENST00000471658 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.61■□□□□ 0.73
PSPC1-203ENST00000471658 USP33Q8TEY7 942 aa19.61■□□□□ 0.73
PSPC1-203ENST00000471658 SP110Q9HB58 689 aa19.61■□□□□ 0.73
PSPC1-203ENST00000471658 HEBP1Q9NRV9 189 aa19.61■□□□□ 0.73
PSPC1-203ENST00000471658 DEC1Q9P2X7 70 aa19.61■□□□□ 0.73
PSPC1-203ENST00000471658 VPS51Q9UID3 782 aa19.61■□□□□ 0.73
PSPC1-203ENST00000471658 ANTXRLA6NF34 631 aa19.6■□□□□ 0.73
PSPC1-203ENST00000471658 SGK1O00141 431 aa19.6■□□□□ 0.73
PSPC1-203ENST00000471658 CD160O95971 181 aa19.6■□□□□ 0.73
PSPC1-203ENST00000471658 ITGAVP06756 1048 aa19.6■□□□□ 0.73
PSPC1-203ENST00000471658 CLCN6P51797 869 aa19.6■□□□□ 0.73
PSPC1-203ENST00000471658 ARF5P84085 180 aa19.6■□□□□ 0.73
PSPC1-203ENST00000471658 GRAMD4Q6IC98 578 aa19.6■□□□□ 0.73
PSPC1-203ENST00000471658 LRRC49Q8IUZ0 686 aa19.6■□□□□ 0.73
PSPC1-203ENST00000471658 PHTF2Q8N3S3 785 aa19.6■□□□□ 0.73
PSPC1-203ENST00000471658 MMGT1Q8N4V1 131 aa19.6■□□□□ 0.73
PSPC1-203ENST00000471658 ALLCQ8N6M5 410 aa19.6■□□□□ 0.73
PSPC1-203ENST00000471658 HTR3CQ8WXA8 447 aa19.6■□□□□ 0.73
PSPC1-203ENST00000471658 BRD8Q9H0E9 1235 aa19.6■□□□□ 0.73
PSPC1-203ENST00000471658 PDFQ9HBH1 243 aa19.6■□□□□ 0.73
PSPC1-203ENST00000471658 CHD5Q8TDI0 1954 aa19.6■□□□□ 0.73
PSPC1-203ENST00000471658 C19orf67A6NJJ6 358 aa19.59■□□□□ 0.73
PSPC1-203ENST00000471658 PRRT4C9JH25 899 aa19.59■□□□□ 0.73
PSPC1-203ENST00000471658 MATN3O15232 486 aa19.59■□□□□ 0.73
PSPC1-203ENST00000471658 SLU7O95391 586 aaKnown RBP19.59■□□□□ 0.73
PSPC1-203ENST00000471658 MT-CO1P00395 513 aa19.59■□□□□ 0.73
PSPC1-203ENST00000471658 ETFBP38117 255 aa19.59■□□□□ 0.73
PSPC1-203ENST00000471658 IL10RBQ08334 325 aa19.59■□□□□ 0.73
PSPC1-203ENST00000471658 WASHC5Q12768 1159 aa19.59■□□□□ 0.73
PSPC1-203ENST00000471658 ZBTB17Q13105 803 aa19.59■□□□□ 0.73
PSPC1-203ENST00000471658 SLC12A1Q13621 1099 aa19.59■□□□□ 0.73
PSPC1-203ENST00000471658 TRIP13Q15645 432 aaPredicted RBP19.59■□□□□ 0.73
PSPC1-203ENST00000471658 HEATR6Q6AI08 1181 aaKnown RBP19.59■□□□□ 0.73
PSPC1-203ENST00000471658 TXNDC11Q6PKC3 985 aa19.59■□□□□ 0.73
PSPC1-203ENST00000471658 GSTA5Q7RTV2 222 aa19.59■□□□□ 0.73
PSPC1-203ENST00000471658 ZNF557Q8N988 423 aaPredicted RBP19.59■□□□□ 0.73
PSPC1-203ENST00000471658 DCAF4L2Q8NA75 395 aa19.59■□□□□ 0.73
PSPC1-203ENST00000471658 ATXN2LQ8WWM7 1075 aaKnown RBP19.59■□□□□ 0.73
PSPC1-203ENST00000471658 SORCS1Q8WY21 1168 aa19.59■□□□□ 0.73
PSPC1-203ENST00000471658 ZNF419Q96HQ0 510 aaPredicted RBP19.59■□□□□ 0.73
PSPC1-203ENST00000471658 ASB2Q96Q27 587 aa19.59■□□□□ 0.73
PSPC1-203ENST00000471658 HINFPQ9BQA5 517 aa19.59■□□□□ 0.73
PSPC1-203ENST00000471658 LRRC1Q9BTT6 524 aa19.59■□□□□ 0.73
PSPC1-203ENST00000471658 TRPV5Q9NQA5 729 aa19.59■□□□□ 0.73
PSPC1-203ENST00000471658 PCYOX1Q9UHG3 505 aa19.59■□□□□ 0.73
PSPC1-203ENST00000471658 SLC27A6Q9Y2P4 619 aa19.59■□□□□ 0.73
PSPC1-203ENST00000471658 TTI1O43156 1089 aa19.58■□□□□ 0.73
PSPC1-203ENST00000471658 RAD51CO43502 376 aa19.58■□□□□ 0.73
PSPC1-203ENST00000471658 IFNB1P01574 187 aa19.58■□□□□ 0.73
PSPC1-203ENST00000471658 JCHAINP01591 159 aa19.58■□□□□ 0.73
PSPC1-203ENST00000471658 GALK1P51570 392 aa19.58■□□□□ 0.73
PSPC1-203ENST00000471658 MBLAC2Q68D91 279 aa19.58■□□□□ 0.73
PSPC1-203ENST00000471658 RPL10LQ96L21 214 aaKnown RBP19.58■□□□□ 0.73
PSPC1-203ENST00000471658 HPCAL4Q9UM19 191 aa19.58■□□□□ 0.73
PSPC1-203ENST00000471658 SHROOM3Q8TF72 1996 aa19.58■□□□□ 0.72
PSPC1-203ENST00000471658 SPECC1L-ADORA2AF8WAN1 911 aa19.58■□□□□ 0.72
PSPC1-203ENST00000471658 K7ERQ8 282 aa19.58■□□□□ 0.72
PSPC1-203ENST00000471658 SRFP11831 508 aa19.58■□□□□ 0.72
PSPC1-203ENST00000471658 CCNB1P14635 433 aa19.58■□□□□ 0.72
PSPC1-203ENST00000471658 PTPN3P26045 913 aa19.58■□□□□ 0.72
PSPC1-203ENST00000471658 DR1Q01658 176 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms