RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 GLG1Q92896 1179 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 CIDECQ96AQ7 238 aaPredicted RBP4.96□□□□□ -1.62
SF3B1-207ENST00000468925 CCDC127Q96BQ5 260 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 C12orf43Q96C57 262 aaKnown RBP4.96□□□□□ -1.62
SF3B1-207ENST00000468925 C18orf8Q96DM3 657 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 EDC3Q96F86 508 aaKnown RBP4.96□□□□□ -1.62
SF3B1-207ENST00000468925 CDHR1Q96JP9 859 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 ZNF597Q96LX8 424 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 FBXL18Q96ME1 805 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 RBM15Q96T37 977 aaKnown RBP eCLIP4.96□□□□□ -1.629e-6■□□□□ 8.2
SF3B1-207ENST00000468925 CYTH2Q99418 400 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 COQ7Q99807 217 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 RTKNQ9BST9 563 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 TRAF4Q9BUZ4 470 aaPredicted RBP4.96□□□□□ -1.62
SF3B1-207ENST00000468925 ANKRD60Q9BZ19 345 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 HOXD1Q9GZZ0 328 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 CLPBQ9H078 707 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 NAPBQ9H115 298 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 SYTL2Q9HCH5 934 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 PTPRHQ9HD43 1115 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 PAK6Q9NQU5 681 aaPredicted RBP4.96□□□□□ -1.62
SF3B1-207ENST00000468925 C1GALT1Q9NS00 363 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 FBXO28Q9NVF7 368 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 GPRC5DQ9NZD1 345 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 ZIM2Q9NZV7 527 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 ZSWIM5Q9P217 1185 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 KIF17Q9P2E2 1029 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 STOML2Q9UJZ1 356 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 GRID1Q9ULK0 1009 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 ARHGAP26Q9UNA1 814 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 TESMINQ9Y4I5 508 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 SPEF1Q9Y4P9 236 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 CPQQ9Y646 472 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 KIDINS220Q9ULH0 1771 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 ACEP12821 1306 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 USP54Q70EL1 1684 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 NWD1Q149M9 1564 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 SCN4AP35499 1836 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.95□□□□□ -1.62
SF3B1-207ENST00000468925 CCDC163A0A0D9SF12 145 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 TMEM238LA0A1B0GVL6 79 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 C16orf96A6NNT2 1141 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 B4E1Z4 1266 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 hCG_1984214I3L0E3 225 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 TRAF5O00463 557 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 EPHB6O15197 1021 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 TMPRSS2O15393 492 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 YKT6O15498 198 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 AKAP10O43572 662 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 SPOPO43791 374 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 OR52Z1P0C646 297 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 FAM87AP0C7U9 286 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 MYL2P10916 166 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 ACTN1P12814 892 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 RAG1P15918 1043 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 NAGAP17050 411 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 JUNBP17275 347 aaPredicted RBP4.95□□□□□ -1.62
SF3B1-207ENST00000468925 GAP43P17677 238 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 TNFAIP3P21580 790 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 ITPKAP23677 461 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 PEX2P28328 305 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 CASP1P29466 404 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 CIITAP33076 1130 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 PTGS2P35354 604 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 ADCY8P40145 1251 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 ETV1P50549 477 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 FCGRTP55899 365 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 ARL4CP56559 192 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 JAM2P57087 298 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 HAND2P61296 217 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 KRT17Q04695 432 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 SLC18A2Q05940 514 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 CETN1Q12798 172 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 COASYQ13057 564 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 BAMBIQ13145 260 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 ITGADQ13349 1161 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 COL9A2Q14055 689 aaPredicted RBP4.95□□□□□ -1.62
SF3B1-207ENST00000468925 PSMD6Q15008 389 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 EFTUD2Q15029 972 aaKnown RBP eCLIP4.95□□□□□ -1.62
SF3B1-207ENST00000468925 PLCL1Q15111 1095 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 CCNG2Q16589 344 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 NFIL3Q16649 462 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 PFKFB3Q16875 520 aaPredicted RBP4.95□□□□□ -1.62
SF3B1-207ENST00000468925 TXNRD1Q16881 649 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 ARHGAP44Q17R89 818 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 MEX3CQ5U5Q3 659 aaKnown RBP4.95□□□□□ -1.62
SF3B1-207ENST00000468925 ARHGEF16Q5VV41 709 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 CIAPIN1Q6FI81 312 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 PLEKHA7Q6IQ23 1121 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 NANOGP8Q6NSW7 305 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 RNF207Q6ZRF8 634 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 C15orf52Q6ZUT6 534 aaKnown RBP4.95□□□□□ -1.62
SF3B1-207ENST00000468925 RFPL4BQ6ZWI9 263 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 CYP4V2Q6ZWL3 525 aaPredicted RBP4.95□□□□□ -1.62
SF3B1-207ENST00000468925 FKBP9P1Q75LS8 142 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 HEATR3Q7Z4Q2 680 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 PRPF39Q86UA1 669 aaKnown RBP4.95□□□□□ -1.62
SF3B1-207ENST00000468925 NLRX1Q86UT6 975 aa4.95□□□□□ -1.62
SF3B1-207ENST00000468925 CDR2LQ86X02 465 aaPredicted RBP4.95□□□□□ -1.62
SF3B1-207ENST00000468925 CARM1Q86X55 608 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms