RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 EMC1Q8N766 993 aa19.57■□□□□ 0.72
COL7A1-207ENST00000467985 DCAF4L2Q8NA75 395 aa19.57■□□□□ 0.72
COL7A1-207ENST00000467985 SKA1Q96BD8 255 aa19.57■□□□□ 0.72
COL7A1-207ENST00000467985 CCDC114Q96M63 670 aa19.57■□□□□ 0.72
COL7A1-207ENST00000467985 ZYG11BQ9C0D3 744 aa19.57■□□□□ 0.72
COL7A1-207ENST00000467985 HSD3B7Q9H2F3 369 aa19.57■□□□□ 0.72
COL7A1-207ENST00000467985 KDM4CQ9H3R0 1056 aa19.57■□□□□ 0.72
COL7A1-207ENST00000467985 RETREG1Q9H6L5 497 aa19.57■□□□□ 0.72
COL7A1-207ENST00000467985 ADAM22Q9P0K1 906 aa19.57■□□□□ 0.72
COL7A1-207ENST00000467985 PPARGC1AQ9UBK2 798 aaKnown RBP19.57■□□□□ 0.72
COL7A1-207ENST00000467985 ANKRD6Q9Y2G4 727 aa19.57■□□□□ 0.72
COL7A1-207ENST00000467985 PCDHB9Q9Y5E1 797 aa19.57■□□□□ 0.72
COL7A1-207ENST00000467985 PCDHGB2Q9Y5G2 931 aa19.57■□□□□ 0.72
COL7A1-207ENST00000467985 A0A1W2PPC4 97 aa19.56■□□□□ 0.72
COL7A1-207ENST00000467985 ILVBLA1L0T0 632 aa19.56■□□□□ 0.72
COL7A1-207ENST00000467985 SMTNL1A8MU46 457 aa19.56■□□□□ 0.72
COL7A1-207ENST00000467985 C1QTNF3-AMACRE9PGA6 284 aa19.56■□□□□ 0.72
COL7A1-207ENST00000467985 MCF2LO15068 1137 aa19.56■□□□□ 0.72
COL7A1-207ENST00000467985 SLC7A4O43246 635 aa19.56■□□□□ 0.72
COL7A1-207ENST00000467985 SH3BP5O60239 455 aa19.56■□□□□ 0.72
COL7A1-207ENST00000467985 TRIM16O95361 564 aa19.56■□□□□ 0.72
COL7A1-207ENST00000467985 KRT3P12035 628 aa19.56■□□□□ 0.72
COL7A1-207ENST00000467985 CLCN6P51797 869 aa19.56■□□□□ 0.72
COL7A1-207ENST00000467985 ADPRHP54922 357 aa19.56■□□□□ 0.72
COL7A1-207ENST00000467985 RACK1P63244 317 aaKnown RBP19.56■□□□□ 0.72
COL7A1-207ENST00000467985 CCDC14Q49A88 953 aa19.56■□□□□ 0.72
COL7A1-207ENST00000467985 ANO6Q4KMQ2 910 aa19.56■□□□□ 0.72
COL7A1-207ENST00000467985 TFAP2DQ7Z6R9 452 aa19.56■□□□□ 0.72
COL7A1-207ENST00000467985 ADAT2Q7Z6V5 191 aaKnown RBP19.56■□□□□ 0.72
COL7A1-207ENST00000467985 PHF13Q86YI8 300 aaPredicted RBP19.56■□□□□ 0.72
COL7A1-207ENST00000467985 ATP11CQ8NB49 1132 aa19.56■□□□□ 0.72
COL7A1-207ENST00000467985 OR14C36Q8NHC7 312 aa19.56■□□□□ 0.72
COL7A1-207ENST00000467985 RXFP2Q8WXD0 754 aa19.56■□□□□ 0.72
COL7A1-207ENST00000467985 TMPRSS4Q9NRS4 437 aa19.56■□□□□ 0.72
COL7A1-207ENST00000467985 TM7SF3Q9NS93 570 aa19.56■□□□□ 0.72
COL7A1-207ENST00000467985 MPP6Q9NZW5 540 aa19.56■□□□□ 0.72
COL7A1-207ENST00000467985 VPS51Q9UID3 782 aa19.56■□□□□ 0.72
COL7A1-207ENST00000467985 PPM1HQ9ULR3 514 aa19.56■□□□□ 0.72
COL7A1-207ENST00000467985 SNX10Q9Y5X0 201 aa19.56■□□□□ 0.72
COL7A1-207ENST00000467985 CACNA1BQ00975 2339 aa19.56■□□□□ 0.72
COL7A1-207ENST00000467985 DOCK4Q8N1I0 1966 aa19.55■□□□□ 0.72
COL7A1-207ENST00000467985 SPAARA0A1B0GVQ0 90 aa19.55■□□□□ 0.72
COL7A1-207ENST00000467985 C2CD4BA6NLJ0 364 aa19.55■□□□□ 0.72
COL7A1-207ENST00000467985 DFNA5O60443 496 aa19.55■□□□□ 0.72
COL7A1-207ENST00000467985 SRCP12931 536 aa19.55■□□□□ 0.72
COL7A1-207ENST00000467985 FERP16591 822 aa19.55■□□□□ 0.72
COL7A1-207ENST00000467985 ADRA1BP35368 520 aa19.55■□□□□ 0.72
COL7A1-207ENST00000467985 DRD3P35462 400 aa19.55■□□□□ 0.72
COL7A1-207ENST00000467985 NRG1Q02297 640 aaPredicted RBP19.55■□□□□ 0.72
COL7A1-207ENST00000467985 PTP4A2Q12974 167 aa19.55■□□□□ 0.72
COL7A1-207ENST00000467985 SUZ12Q15022 739 aaKnown RBP19.55■□□□□ 0.72
COL7A1-207ENST00000467985 TRIP6Q15654 476 aaKnown RBP19.55■□□□□ 0.72
COL7A1-207ENST00000467985 ZNF423Q2M1K9 1284 aa19.55■□□□□ 0.72
COL7A1-207ENST00000467985 KIF19Q2TAC6 998 aa19.55■□□□□ 0.72
COL7A1-207ENST00000467985 RETSATQ6NUM9 610 aa19.55■□□□□ 0.72
COL7A1-207ENST00000467985 Q6ZVU0 165 aa19.55■□□□□ 0.72
COL7A1-207ENST00000467985 FAM131CQ96AQ9 280 aa19.55■□□□□ 0.72
COL7A1-207ENST00000467985 PCDHB18PQ96TA0 734 aa19.55■□□□□ 0.72
COL7A1-207ENST00000467985 PSMB7Q99436 277 aa19.55■□□□□ 0.72
COL7A1-207ENST00000467985 AGPAT1Q99943 283 aa19.55■□□□□ 0.72
COL7A1-207ENST00000467985 ORAI3Q9BRQ5 295 aa19.55■□□□□ 0.72
COL7A1-207ENST00000467985 SELENOOQ9BVL4 669 aa19.55■□□□□ 0.72
COL7A1-207ENST00000467985 ACE2Q9BYF1 805 aaPredicted RBP19.55■□□□□ 0.72
COL7A1-207ENST00000467985 SEPT11Q9NVA2 429 aaKnown RBP19.55■□□□□ 0.72
COL7A1-207ENST00000467985 OR12D3Q9UGF7 316 aa19.55■□□□□ 0.72
COL7A1-207ENST00000467985 MYO6Q9UM54 1294 aa19.55■□□□□ 0.72
COL7A1-207ENST00000467985 WASF3Q9UPY6 502 aa19.55■□□□□ 0.72
COL7A1-207ENST00000467985 SLCO1B1Q9Y6L6 691 aa19.55■□□□□ 0.72
COL7A1-207ENST00000467985 ANKRD62A6NC57 917 aa19.54■□□□□ 0.72
COL7A1-207ENST00000467985 C10orf142B7Z368 130 aa19.54■□□□□ 0.72
COL7A1-207ENST00000467985 VILLO15195 856 aa19.54■□□□□ 0.72
COL7A1-207ENST00000467985 ATP1A3P13637 1013 aa19.54■□□□□ 0.72
COL7A1-207ENST00000467985 NUDT1P36639 197 aa19.54■□□□□ 0.72
COL7A1-207ENST00000467985 ETFBP38117 255 aa19.54■□□□□ 0.72
COL7A1-207ENST00000467985 C21orf59P57076 290 aa19.54■□□□□ 0.72
COL7A1-207ENST00000467985 C1QBPQ07021 282 aaKnown RBP19.54■□□□□ 0.72
COL7A1-207ENST00000467985 CCDC15Q0P6D6 951 aa19.54■□□□□ 0.72
COL7A1-207ENST00000467985 CDO1Q16878 200 aa19.54■□□□□ 0.72
COL7A1-207ENST00000467985 PPP1R2P3Q6NXS1 205 aa19.54■□□□□ 0.72
COL7A1-207ENST00000467985 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.54■□□□□ 0.72
COL7A1-207ENST00000467985 C3orf20Q8ND61 904 aa19.54■□□□□ 0.72
COL7A1-207ENST00000467985 CENPIQ92674 756 aaPredicted RBP19.54■□□□□ 0.72
COL7A1-207ENST00000467985 OSBPL2Q9H1P3 480 aa19.54■□□□□ 0.72
COL7A1-207ENST00000467985 IL21RQ9HBE5 538 aa19.54■□□□□ 0.72
COL7A1-207ENST00000467985 FNDC3AQ9Y2H6 1198 aaKnown RBP19.54■□□□□ 0.72
COL7A1-207ENST00000467985 SNX11Q9Y5W9 270 aa19.54■□□□□ 0.72
COL7A1-207ENST00000467985 TBC1D3DA0A087WVF3 549 aa19.53■□□□□ 0.72
COL7A1-207ENST00000467985 TBC1D3IA0A087WXS9 549 aa19.53■□□□□ 0.72
COL7A1-207ENST00000467985 TBC1D3EA0A087X179 549 aa19.53■□□□□ 0.72
COL7A1-207ENST00000467985 TBC1D3KA0A087X1G2 549 aa19.53■□□□□ 0.72
COL7A1-207ENST00000467985 A0A0D9SEW6 157 aa19.53■□□□□ 0.72
COL7A1-207ENST00000467985 TBC1D3FA6NER0 549 aaPredicted RBP19.53■□□□□ 0.72
COL7A1-207ENST00000467985 TBC1D3LB9A6J9 549 aa19.53■□□□□ 0.72
COL7A1-207ENST00000467985 FLRT2O43155 660 aa19.53■□□□□ 0.72
COL7A1-207ENST00000467985 SNAP91O60641 907 aa19.53■□□□□ 0.72
COL7A1-207ENST00000467985 MT-CO1P00395 513 aa19.53■□□□□ 0.72
COL7A1-207ENST00000467985 TBC1D3HP0C7X1 549 aa19.53■□□□□ 0.72
COL7A1-207ENST00000467985 RFC1P35251 1148 aaPredicted RBP19.53■□□□□ 0.72
COL7A1-207ENST00000467985 SLC20A2Q08357 652 aa19.53■□□□□ 0.72
COL7A1-207ENST00000467985 C15orf59Q2T9L4 293 aaPredicted RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms