RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 ZDHHC9Q9Y397 364 aa12.55□□□□□ -0.4
UBR4-211ENST00000467272 A0A1W2PQ27 194 aa12.54□□□□□ -0.4
UBR4-211ENST00000467272 A0A1W2PQ64 194 aa12.54□□□□□ -0.4
UBR4-211ENST00000467272 M0QYV0 167 aa12.54□□□□□ -0.4
UBR4-211ENST00000467272 TRUB2O95900 331 aaKnown RBP12.54□□□□□ -0.4
UBR4-211ENST00000467272 C6P13671 934 aa12.54□□□□□ -0.4
UBR4-211ENST00000467272 PDGFRAP16234 1089 aa12.54□□□□□ -0.4
UBR4-211ENST00000467272 PRCPP42785 496 aa12.54□□□□□ -0.4
UBR4-211ENST00000467272 C1QBPQ07021 282 aaKnown RBP12.54□□□□□ -0.4
UBR4-211ENST00000467272 TMEM259Q4ZIN3 620 aa12.54□□□□□ -0.4
UBR4-211ENST00000467272 TTC39BQ5VTQ0 682 aaPredicted RBP12.54□□□□□ -0.4
UBR4-211ENST00000467272 FAM46CQ5VWP2 391 aa12.54□□□□□ -0.4
UBR4-211ENST00000467272 ANKRD40Q6AI12 368 aa12.54□□□□□ -0.4
UBR4-211ENST00000467272 GCNT7Q6ZNI0 430 aa12.54□□□□□ -0.4
UBR4-211ENST00000467272 ERCC4Q92889 916 aaPredicted RBP12.54□□□□□ -0.4
UBR4-211ENST00000467272 APOLD1Q96LR9 279 aa12.54□□□□□ -0.4
UBR4-211ENST00000467272 NOX5Q96PH1 765 aa12.54□□□□□ -0.4
UBR4-211ENST00000467272 LGMNQ99538 433 aa12.54□□□□□ -0.4
UBR4-211ENST00000467272 MIS12Q9H081 205 aa12.54□□□□□ -0.4
UBR4-211ENST00000467272 ZFR2Q9UPR6 939 aaKnown RBP12.54□□□□□ -0.4
UBR4-211ENST00000467272 HS3ST2Q9Y278 367 aa12.54□□□□□ -0.4
UBR4-211ENST00000467272 TBC1D30Q9Y2I9 924 aa12.54□□□□□ -0.4
UBR4-211ENST00000467272 TCAF2A6NFQ2 919 aa12.53□□□□□ -0.4
UBR4-211ENST00000467272 SCAMP1O15126 338 aa12.53□□□□□ -0.4
UBR4-211ENST00000467272 SART1O43290 800 aaKnown RBP12.53□□□□□ -0.4
UBR4-211ENST00000467272 USP12O75317 370 aa12.53□□□□□ -0.4
UBR4-211ENST00000467272 CSO75390 466 aaKnown RBP12.53□□□□□ -0.4
UBR4-211ENST00000467272 MOCS2O96007 188 aaPredicted RBP12.53□□□□□ -0.4
UBR4-211ENST00000467272 THEGLP0DJG4 465 aa12.53□□□□□ -0.4
UBR4-211ENST00000467272 FMO5P49326 533 aa12.53□□□□□ -0.4
UBR4-211ENST00000467272 IRAK1P51617 712 aa12.53□□□□□ -0.4
UBR4-211ENST00000467272 GABREP78334 506 aa12.53□□□□□ -0.4
UBR4-211ENST00000467272 FKBP3Q00688 224 aaKnown RBP12.53□□□□□ -0.4
UBR4-211ENST00000467272 GCNT1Q02742 428 aa12.53□□□□□ -0.4
UBR4-211ENST00000467272 VAC14Q08AM6 782 aa12.53□□□□□ -0.4
UBR4-211ENST00000467272 LRMPQ12912 555 aa12.53□□□□□ -0.4
UBR4-211ENST00000467272 DLG2Q15700 870 aa12.53□□□□□ -0.4
UBR4-211ENST00000467272 ISXQ2M1V0 245 aa12.53□□□□□ -0.4
UBR4-211ENST00000467272 ARHGAP40Q5TG30 622 aa12.53□□□□□ -0.4
UBR4-211ENST00000467272 RNF219Q5W0B1 726 aaPredicted RBP12.53□□□□□ -0.4
UBR4-211ENST00000467272 FBXL22Q6P050 247 aa12.53□□□□□ -0.4
UBR4-211ENST00000467272 DSG4Q86SJ6 1040 aa12.53□□□□□ -0.4
UBR4-211ENST00000467272 HORMAD1Q86X24 394 aa12.53□□□□□ -0.4
UBR4-211ENST00000467272 CHSY1Q86X52 802 aa12.53□□□□□ -0.4
UBR4-211ENST00000467272 CIR1Q86X95 450 aaPredicted RBP12.53□□□□□ -0.4
UBR4-211ENST00000467272 SH2D3CQ8N5H7 860 aa12.53□□□□□ -0.4
UBR4-211ENST00000467272 OR13H1Q8NG92 308 aa12.53□□□□□ -0.4
UBR4-211ENST00000467272 OR2A12Q8NGT7 310 aa12.53□□□□□ -0.4
UBR4-211ENST00000467272 OR8D1Q8WZ84 308 aa12.53□□□□□ -0.4
UBR4-211ENST00000467272 CCDC47Q96A33 483 aaKnown RBP12.53□□□□□ -0.4
UBR4-211ENST00000467272 KREMEN1Q96MU8 473 aa12.53□□□□□ -0.4
UBR4-211ENST00000467272 SLC46A1Q96NT5 459 aa12.53□□□□□ -0.4
UBR4-211ENST00000467272 DEPDC7Q96QD5 511 aa12.53□□□□□ -0.4
UBR4-211ENST00000467272 POPDC2Q9HBU9 364 aa12.53□□□□□ -0.4
UBR4-211ENST00000467272 RELNP78509 3460 aa12.52□□□□□ -0.4
UBR4-211ENST00000467272 A0A1W2PQU0 124 aa12.52□□□□□ -0.41
UBR4-211ENST00000467272 CDRT15L2A8MXV6 281 aa12.52□□□□□ -0.41
UBR4-211ENST00000467272 K7ENP7 123 aa12.52□□□□□ -0.41
UBR4-211ENST00000467272 K7ESM1 405 aa12.52□□□□□ -0.41
UBR4-211ENST00000467272 ZNF821O75541 412 aaPredicted RBP12.52□□□□□ -0.41
UBR4-211ENST00000467272 MT-CO1P00395 513 aa12.52□□□□□ -0.41
UBR4-211ENST00000467272 APOEP02649 317 aa12.52□□□□□ -0.41
UBR4-211ENST00000467272 MYF5P13349 255 aa12.52□□□□□ -0.41
UBR4-211ENST00000467272 PRLRP16471 622 aa12.52□□□□□ -0.41
UBR4-211ENST00000467272 NNMTP40261 264 aa12.52□□□□□ -0.41
UBR4-211ENST00000467272 OXCT1P55809 520 aa12.52□□□□□ -0.41
UBR4-211ENST00000467272 YWHAZP63104 245 aaKnown RBP12.52□□□□□ -0.41
UBR4-211ENST00000467272 LY6DQ14210 128 aa12.52□□□□□ -0.41
UBR4-211ENST00000467272 FGL2Q14314 439 aa12.52□□□□□ -0.41
UBR4-211ENST00000467272 TAF5Q15542 800 aa12.52□□□□□ -0.41
UBR4-211ENST00000467272 DCAF17Q5H9S7 520 aaPredicted RBP12.52□□□□□ -0.41
UBR4-211ENST00000467272 TCERG1LQ5VWI1 586 aa12.52□□□□□ -0.41
UBR4-211ENST00000467272 DENND1BQ6P3S1 775 aa12.52□□□□□ -0.41
UBR4-211ENST00000467272 INO80CQ6PI98 192 aaPredicted RBP12.52□□□□□ -0.41
UBR4-211ENST00000467272 Q6ZVU0 165 aa12.52□□□□□ -0.41
UBR4-211ENST00000467272 CCDC117Q8IWD4 279 aaPredicted RBP12.52□□□□□ -0.41
UBR4-211ENST00000467272 ZNF683Q8IZ20 524 aa12.52□□□□□ -0.41
UBR4-211ENST00000467272 TMIEQ8NEW7 156 aa12.52□□□□□ -0.41
UBR4-211ENST00000467272 KCNE4Q8WWG9 221 aa12.52□□□□□ -0.41
UBR4-211ENST00000467272 VOPP1Q96AW1 172 aa12.52□□□□□ -0.41
UBR4-211ENST00000467272 ARRDC3Q96B67 414 aa12.52□□□□□ -0.41
UBR4-211ENST00000467272 GRAMD1AQ96CP6 724 aa12.52□□□□□ -0.41
UBR4-211ENST00000467272 MED8Q96G25 268 aa12.52□□□□□ -0.41
UBR4-211ENST00000467272 VCPIP1Q96JH7 1222 aa12.52□□□□□ -0.41
UBR4-211ENST00000467272 BMFQ96LC9 184 aa12.52□□□□□ -0.41
UBR4-211ENST00000467272 SLC2A13Q96QE2 648 aa12.52□□□□□ -0.41
UBR4-211ENST00000467272 PSMB7Q99436 277 aa12.52□□□□□ -0.41
UBR4-211ENST00000467272 HDAC8Q9BY41 377 aa12.52□□□□□ -0.41
UBR4-211ENST00000467272 METTL14Q9HCE5 456 aaKnown RBP12.52□□□□□ -0.41
UBR4-211ENST00000467272 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.52□□□□□ -0.41
UBR4-211ENST00000467272 ARMCX3Q9UH62 379 aaPredicted RBP12.52□□□□□ -0.41
UBR4-211ENST00000467272 CEP83Q9Y592 693 aa12.52□□□□□ -0.41
UBR4-211ENST00000467272 PCDHB4Q9Y5E5 795 aa12.52□□□□□ -0.41
UBR4-211ENST00000467272 PCDHGA8Q9Y5G5 932 aa12.52□□□□□ -0.41
UBR4-211ENST00000467272 HS3ST3A1Q9Y663 406 aa12.52□□□□□ -0.41
UBR4-211ENST00000467272 DOCK9Q9BZ29 2069 aa12.52□□□□□ -0.41
UBR4-211ENST00000467272 F5H5T6 163 aa12.51□□□□□ -0.41
UBR4-211ENST00000467272 I6L893 689 aaPredicted RBP12.51□□□□□ -0.41
UBR4-211ENST00000467272 FFAR2O15552 330 aa12.51□□□□□ -0.41
UBR4-211ENST00000467272 ZNF202O95125 648 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms