RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 KLF15Q9UIH9 416 aa13.03□□□□□ -0.32
UBR4-210ENST00000466969 KCND3Q9UK17 655 aa13.03□□□□□ -0.32
UBR4-210ENST00000466969 DOLKQ9UPQ8 538 aa13.03□□□□□ -0.32
UBR4-210ENST00000466969 ERVW-1Q9UQF0 538 aa13.03□□□□□ -0.32
UBR4-210ENST00000466969 CEP83Q9Y592 693 aa13.03□□□□□ -0.32
UBR4-210ENST00000466969 PCDHGA3Q9Y5H0 932 aa13.03□□□□□ -0.32
UBR4-210ENST00000466969 PCDHA5Q9Y5H7 936 aa13.03□□□□□ -0.32
UBR4-210ENST00000466969 RNF215Q9Y6U7 377 aa13.03□□□□□ -0.32
UBR4-210ENST00000466969 DIDO1Q9BTC0 2240 aaKnown RBP13.03□□□□□ -0.32
UBR4-210ENST00000466969 PP2D1A8MPX8 630 aa13.02□□□□□ -0.33
UBR4-210ENST00000466969 DTNBO60941 627 aa13.02□□□□□ -0.33
UBR4-210ENST00000466969 BEST1O76090 585 aa13.02□□□□□ -0.33
UBR4-210ENST00000466969 HDAC4P56524 1084 aa13.02□□□□□ -0.33
UBR4-210ENST00000466969 ELOAQ14241 798 aaKnown RBP13.02□□□□□ -0.33
UBR4-210ENST00000466969 PTK2BQ14289 1009 aa13.02□□□□□ -0.33
UBR4-210ENST00000466969 NR6A1Q15406 480 aa13.02□□□□□ -0.33
UBR4-210ENST00000466969 ATP1A1-AS1Q5TC04 95 aa13.02□□□□□ -0.33
UBR4-210ENST00000466969 NEK5Q6P3R8 708 aa13.02□□□□□ -0.33
UBR4-210ENST00000466969 HORMAD1Q86X24 394 aa13.02□□□□□ -0.33
UBR4-210ENST00000466969 CCNJLQ8IV13 435 aa13.02□□□□□ -0.33
UBR4-210ENST00000466969 OR6C4Q8NGE1 309 aa13.02□□□□□ -0.33
UBR4-210ENST00000466969 WFDC5Q8TCV5 224 aa13.02□□□□□ -0.33
UBR4-210ENST00000466969 NOC3LQ8WTT2 800 aaKnown RBP13.02□□□□□ -0.33
UBR4-210ENST00000466969 SCG3Q8WXD2 468 aaKnown RBP13.02□□□□□ -0.33
UBR4-210ENST00000466969 JAKMIP2Q96AA8 810 aa13.02□□□□□ -0.33
UBR4-210ENST00000466969 PLD4Q96BZ4 506 aa13.02□□□□□ -0.33
UBR4-210ENST00000466969 TNIP3Q96KP6 325 aa13.02□□□□□ -0.33
UBR4-210ENST00000466969 SPAG5Q96R06 1193 aa13.02□□□□□ -0.33
UBR4-210ENST00000466969 REEP2Q9BRK0 252 aa13.02□□□□□ -0.33
UBR4-210ENST00000466969 SEMA6CQ9H3T2 930 aa13.02□□□□□ -0.33
UBR4-210ENST00000466969 INTS13Q9NVM9 706 aa13.02□□□□□ -0.33
UBR4-210ENST00000466969 CLIC5Q9NZA1 410 aa13.02□□□□□ -0.33
UBR4-210ENST00000466969 SIRPGQ9P1W8 387 aa13.02□□□□□ -0.33
UBR4-210ENST00000466969 TLK1Q9UKI8 766 aa13.02□□□□□ -0.33
UBR4-210ENST00000466969 HS3ST3A1Q9Y663 406 aa13.02□□□□□ -0.33
UBR4-210ENST00000466969 YY2O15391 372 aa13.01□□□□□ -0.33
UBR4-210ENST00000466969 CDC45O75419 566 aa13.01□□□□□ -0.33
UBR4-210ENST00000466969 GCATO75600 419 aa13.01□□□□□ -0.33
UBR4-210ENST00000466969 PDGFAP04085 211 aa13.01□□□□□ -0.33
UBR4-210ENST00000466969 CD1EP15812 388 aa13.01□□□□□ -0.33
UBR4-210ENST00000466969 RABIFP47224 123 aa13.01□□□□□ -0.33
UBR4-210ENST00000466969 ARSDP51689 593 aa13.01□□□□□ -0.33
UBR4-210ENST00000466969 PER3P56645 1201 aa13.01□□□□□ -0.33
UBR4-210ENST00000466969 PDE1CQ14123 709 aaPredicted RBP13.01□□□□□ -0.33
UBR4-210ENST00000466969 TRIM29Q14134 588 aa13.01□□□□□ -0.33
UBR4-210ENST00000466969 C16orf72Q14CZ0 275 aa13.01□□□□□ -0.33
UBR4-210ENST00000466969 DUOXA2Q1HG44 320 aa13.01□□□□□ -0.33
UBR4-210ENST00000466969 ZNF284Q2VY69 593 aa13.01□□□□□ -0.33
UBR4-210ENST00000466969 WDR72Q3MJ13 1102 aa13.01□□□□□ -0.33
UBR4-210ENST00000466969 CRTC2Q53ET0 693 aaPredicted RBP13.01□□□□□ -0.33
UBR4-210ENST00000466969 PRR30Q53SZ7 412 aaPredicted RBP13.01□□□□□ -0.33
UBR4-210ENST00000466969 KYAT3Q6YP21 454 aaKnown RBP13.01□□□□□ -0.33
UBR4-210ENST00000466969 TAOK1Q7L7X3 1001 aa13.01□□□□□ -0.33
UBR4-210ENST00000466969 GPRIN1Q7Z2K8 1008 aa13.01□□□□□ -0.33
UBR4-210ENST00000466969 MFN1Q8IWA4 741 aa13.01□□□□□ -0.33
UBR4-210ENST00000466969 RBFAQ8N0V3 343 aa13.01□□□□□ -0.33
UBR4-210ENST00000466969 FUKQ8N0W3 1084 aa13.01□□□□□ -0.33
UBR4-210ENST00000466969 Q8N9G6 341 aaPredicted RBP13.01□□□□□ -0.33
UBR4-210ENST00000466969 CCDC112Q8NEF3 446 aa13.01□□□□□ -0.33
UBR4-210ENST00000466969 CSNK1G1Q9HCP0 422 aa13.01□□□□□ -0.33
UBR4-210ENST00000466969 SLAMF7Q9NQ25 335 aa13.01□□□□□ -0.33
UBR4-210ENST00000466969 GPR27Q9NS67 375 aa13.01□□□□□ -0.33
UBR4-210ENST00000466969 FOXD4L1Q9NU39 408 aa13.01□□□□□ -0.33
UBR4-210ENST00000466969 MARCH2Q9P0N8 246 aa13.01□□□□□ -0.33
UBR4-210ENST00000466969 PCDHB3Q9Y5E6 796 aa13.01□□□□□ -0.33
UBR4-210ENST00000466969 ITIH6Q6UXX5 1313 aa13.01□□□□□ -0.33
UBR4-210ENST00000466969 CROCCQ5TZA2 2017 aa13.01□□□□□ -0.33
UBR4-210ENST00000466969 C1QTNF3-AMACRE9PGA6 284 aa13□□□□□ -0.33
UBR4-210ENST00000466969 TBL1XO60907 577 aa13□□□□□ -0.33
UBR4-210ENST00000466969 ITGA3P26006 1051 aa13□□□□□ -0.33
UBR4-210ENST00000466969 NNMTP40261 264 aa13□□□□□ -0.33
UBR4-210ENST00000466969 ARSHQ5FYA8 562 aa13□□□□□ -0.33
UBR4-210ENST00000466969 EFHC2Q5JST6 749 aa13□□□□□ -0.33
UBR4-210ENST00000466969 XYLT1Q86Y38 959 aa13□□□□□ -0.33
UBR4-210ENST00000466969 SLITRK4Q8IW52 837 aa13□□□□□ -0.33
UBR4-210ENST00000466969 NLGN4XQ8N0W4 816 aa13□□□□□ -0.33
UBR4-210ENST00000466969 NLGN4YQ8NFZ3 816 aaPredicted RBP13□□□□□ -0.33
UBR4-210ENST00000466969 OR5B17Q8NGF7 314 aa13□□□□□ -0.33
UBR4-210ENST00000466969 KCNB2Q92953 911 aa13□□□□□ -0.33
UBR4-210ENST00000466969 BMFQ96LC9 184 aa13□□□□□ -0.33
UBR4-210ENST00000466969 IKZF4Q9H2S9 585 aa13□□□□□ -0.33
UBR4-210ENST00000466969 SLCO3A1Q9UIG8 710 aa13□□□□□ -0.33
UBR4-210ENST00000466969 B3GALT1Q9Y5Z6 326 aa13□□□□□ -0.33
UBR4-210ENST00000466969 LOC101059948A0A1B0GTJ6 334 aa12.99□□□□□ -0.33
UBR4-210ENST00000466969 GOLGA8IPA6NC78 632 aa12.99□□□□□ -0.33
UBR4-210ENST00000466969 POM121BA6NF01 834 aa12.99□□□□□ -0.33
UBR4-210ENST00000466969 GOLGA8JA6NMD2 632 aa12.99□□□□□ -0.33
UBR4-210ENST00000466969 MOCS3O95396 460 aa12.99□□□□□ -0.33
UBR4-210ENST00000466969 SLFN14P0C7P3 912 aa12.99□□□□□ -0.33
UBR4-210ENST00000466969 CD99P14209 185 aa12.99□□□□□ -0.33
UBR4-210ENST00000466969 MAP4P27816 1152 aaKnown RBP12.99□□□□□ -0.33
UBR4-210ENST00000466969 CLCN1P35523 988 aa12.99□□□□□ -0.33
UBR4-210ENST00000466969 CTSOP43234 321 aaPredicted RBP12.99□□□□□ -0.33
UBR4-210ENST00000466969 ZNF131P52739 623 aa12.99□□□□□ -0.33
UBR4-210ENST00000466969 C1QBPQ07021 282 aaKnown RBP12.99□□□□□ -0.33
UBR4-210ENST00000466969 ZRSR2Q15696 482 aaKnown RBP12.99□□□□□ -0.33
UBR4-210ENST00000466969 MAP9Q49MG5 647 aa12.99□□□□□ -0.33
UBR4-210ENST00000466969 C14orf28Q4W4Y0 310 aa12.99□□□□□ -0.33
UBR4-210ENST00000466969 TTC38Q5R3I4 469 aa12.99□□□□□ -0.33
UBR4-210ENST00000466969 MPP7Q5T2T1 576 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms