RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 KCNK3O14649 394 aa6.21□□□□□ -1.42
NCL-208ENST00000466274 ADAMTS3O15072 1205 aa6.21□□□□□ -1.42
NCL-208ENST00000466274 NPC1O15118 1278 aa6.21□□□□□ -1.42
NCL-208ENST00000466274 PPM1BO75688 479 aa6.21□□□□□ -1.42
NCL-208ENST00000466274 NOL4O94818 638 aa6.21□□□□□ -1.42
NCL-208ENST00000466274 ITGB6P18564 788 aa6.21□□□□□ -1.42
NCL-208ENST00000466274 TNFRSF8P28908 595 aa6.21□□□□□ -1.42
NCL-208ENST00000466274 PPP3CCP48454 512 aa6.21□□□□□ -1.42
NCL-208ENST00000466274 TPMTP51580 245 aa6.21□□□□□ -1.42
NCL-208ENST00000466274 IL9RQ01113 521 aa6.21□□□□□ -1.42
NCL-208ENST00000466274 TSPY1Q01534 308 aa6.21□□□□□ -1.42
NCL-208ENST00000466274 SLC7A5Q01650 507 aa6.21□□□□□ -1.42
NCL-208ENST00000466274 ST3GAL1Q11201 340 aa6.21□□□□□ -1.42
NCL-208ENST00000466274 ZSCAN23Q3MJ62 389 aa6.21□□□□□ -1.42
NCL-208ENST00000466274 LINC00303Q3SY05 128 aa6.21□□□□□ -1.42
NCL-208ENST00000466274 HS1BP3Q53T59 392 aa6.21□□□□□ -1.42
NCL-208ENST00000466274 RHBDF2Q6PJF5 856 aa6.21□□□□□ -1.42
NCL-208ENST00000466274 EID2Q8N6I1 236 aa6.21□□□□□ -1.42
NCL-208ENST00000466274 OR10T2Q8NGX3 314 aa6.21□□□□□ -1.42
NCL-208ENST00000466274 LRRC15Q8TF66 581 aa6.21□□□□□ -1.42
NCL-208ENST00000466274 HPS3Q969F9 1004 aa6.21□□□□□ -1.42
NCL-208ENST00000466274 GRAMD1AQ96CP6 724 aa6.21□□□□□ -1.42
NCL-208ENST00000466274 SGF29Q96ES7 293 aa6.21□□□□□ -1.42
NCL-208ENST00000466274 SIPA1Q96FS4 1042 aa6.21□□□□□ -1.42
NCL-208ENST00000466274 SLC22A12Q96S37 553 aa6.21□□□□□ -1.42
NCL-208ENST00000466274 TSPAN18Q96SJ8 248 aa6.21□□□□□ -1.42
NCL-208ENST00000466274 ELF4Q99607 663 aaPredicted RBP6.21□□□□□ -1.42
NCL-208ENST00000466274 EIF2AK1Q9BQI3 630 aaKnown RBP6.21□□□□□ -1.42
NCL-208ENST00000466274 CDT1Q9H211 546 aa6.21□□□□□ -1.42
NCL-208ENST00000466274 TM9SF3Q9HD45 589 aa6.21□□□□□ -1.42
NCL-208ENST00000466274 KCNMB3Q9NPA1 279 aa6.21□□□□□ -1.42
NCL-208ENST00000466274 GCNT4Q9P109 453 aa6.21□□□□□ -1.42
NCL-208ENST00000466274 RCAN3Q9UKA8 241 aa6.21□□□□□ -1.42
NCL-208ENST00000466274 UBQLN1Q9UMX0 589 aaKnown RBP6.21□□□□□ -1.42
NCL-208ENST00000466274 RBM8AQ9Y5S9 174 aaKnown RBP6.21□□□□□ -1.42
NCL-208ENST00000466274 MUC22E2RYF6 1773 aaPredicted RBP6.21□□□□□ -1.42
NCL-208ENST00000466274 TDRD15B5MCY1 1934 aaKnown RBP6.21□□□□□ -1.42
NCL-208ENST00000466274 LRRK2Q5S007 2527 aa6.21□□□□□ -1.42
NCL-208ENST00000466274 C2CD3Q4AC94 2353 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 GOLGA4Q13439 2230 aaKnown RBP6.2□□□□□ -1.42
NCL-208ENST00000466274 GON4LQ3T8J9 2241 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 NPHP3-ACAD11A0A0J9YXS1 232 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 C2orf78A6NCI8 922 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 VILLO15195 856 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 HOXC11O43248 304 aaPredicted RBP6.2□□□□□ -1.42
NCL-208ENST00000466274 SLC37A4O43826 429 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 USP12O75317 370 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 TULP3O75386 442 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 IGLV3-19P01714 112 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 ACP1P24666 158 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 CD27P26842 260 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 CASRP41180 1078 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 BCAT1P54687 386 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 LILRA4P59901 499 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 SLC7A9P82251 487 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 MYL7Q01449 175 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 SLC9A5Q14940 896 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 ZC2HC1CQ53FD0 456 aaPredicted RBP6.2□□□□□ -1.42
NCL-208ENST00000466274 LY6G5CQ5SRR4 150 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 EGFLAMQ63HQ2 1017 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 HIST2H2BCQ6DN03 193 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 GRAMD4Q6IC98 578 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 GALNT17Q6IS24 598 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 GATAD2AQ86YP4 633 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 FAM177A1Q8N128 213 aaPredicted RBP6.2□□□□□ -1.42
NCL-208ENST00000466274 ARHGEF39Q8N4T4 335 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 NETO2Q8NC67 525 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 ZNF564Q8TBZ8 553 aaPredicted RBP6.2□□□□□ -1.42
NCL-208ENST00000466274 SAP25Q8TEE9 199 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 PIGOQ8TEQ8 1089 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 CPA5Q8WXQ8 436 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 KLHL6Q8WZ60 621 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 KIFAP3Q92845 792 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 EXTL1Q92935 676 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 SENP8Q96LD8 212 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 XPO6Q96QU8 1125 aaKnown RBP6.2□□□□□ -1.42
NCL-208ENST00000466274 ACO2Q99798 780 aaKnown RBP6.2□□□□□ -1.42
NCL-208ENST00000466274 HSD17B14Q9BPX1 270 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 SYT3Q9BQG1 590 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.2□□□□□ -1.422e-66■□□□□ 9
NCL-208ENST00000466274 GEMIN8Q9NWZ8 242 aaKnown RBP6.2□□□□□ -1.42
NCL-208ENST00000466274 TRPM5Q9NZQ8 1165 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 ORC3Q9UBD5 711 aaPredicted RBP6.2□□□□□ -1.42
NCL-208ENST00000466274 TUBGCP4Q9UGJ1 667 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 ANAPC2Q9UJX6 822 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 NUDT5Q9UKK9 219 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 RAD54BQ9Y620 910 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 AHCTF1Q8WYP5 2266 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 DOPEY2Q9Y3R5 2298 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 TSC2P49815 1807 aa6.2□□□□□ -1.42
NCL-208ENST00000466274 PTPRBP23467 1997 aa6.19□□□□□ -1.42
NCL-208ENST00000466274 KLF18A0A0U1RQI7 1052 aa6.19□□□□□ -1.42
NCL-208ENST00000466274 C7orf72A4D263 438 aa6.19□□□□□ -1.42
NCL-208ENST00000466274 ARHGEF35A5YM69 484 aa6.19□□□□□ -1.42
NCL-208ENST00000466274 CBX4O00257 560 aa6.19□□□□□ -1.42
NCL-208ENST00000466274 CCNT1O60563 726 aaKnown RBP6.19□□□□□ -1.42
NCL-208ENST00000466274 TADA3O75528 432 aa6.19□□□□□ -1.42
NCL-208ENST00000466274 AGFG2O95081 481 aa6.19□□□□□ -1.42
NCL-208ENST00000466274 FUCA1P04066 466 aa6.19□□□□□ -1.42
NCL-208ENST00000466274 HARSP12081 509 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms