RNA–Protein interactions for RNA: ENST00000465643.1

CDK13-203, Transcript of cyclin dependent kinase 13, humanhuman

TSL 1 (best)

Gene CDK13, Length 2,394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-203ENST00000465643 ATG16L1Q676U5 607 aa4.99□□□□□ -1.61
CDK13-203ENST00000465643 HAUS3Q68CZ6 603 aa4.99□□□□□ -1.61
CDK13-203ENST00000465643 LRRC55Q6ZSA7 311 aa4.99□□□□□ -1.61
CDK13-203ENST00000465643 PIK3AP1Q6ZUJ8 805 aa4.99□□□□□ -1.61
CDK13-203ENST00000465643 BBS12Q6ZW61 710 aa4.99□□□□□ -1.61
CDK13-203ENST00000465643 FASTKD5Q7L8L6 764 aaKnown RBP4.99□□□□□ -1.61
CDK13-203ENST00000465643 SIAH1Q8IUQ4 282 aa4.99□□□□□ -1.61
CDK13-203ENST00000465643 ADGRG5Q8IZF4 528 aa4.99□□□□□ -1.61
CDK13-203ENST00000465643 TMTC2Q8N394 836 aa4.99□□□□□ -1.61
CDK13-203ENST00000465643 FSTL5Q8N475 847 aaPredicted RBP4.99□□□□□ -1.61
CDK13-203ENST00000465643 MBD3L2Q8NHZ7 208 aaPredicted RBP4.99□□□□□ -1.61
CDK13-203ENST00000465643 RSC1A1Q92681 617 aa4.99□□□□□ -1.61
CDK13-203ENST00000465643 C17orf80Q9BSJ5 609 aa4.99□□□□□ -1.61
CDK13-203ENST00000465643 ARHGAP39Q9C0H5 1083 aa4.99□□□□□ -1.61
CDK13-203ENST00000465643 REXO4Q9GZR2 422 aaKnown RBP4.99□□□□□ -1.61
CDK13-203ENST00000465643 ABHD16BQ9H3Z7 469 aa4.99□□□□□ -1.61
CDK13-203ENST00000465643 LY9Q9HBG7 655 aa4.99□□□□□ -1.61
CDK13-203ENST00000465643 OLA1Q9NTK5 396 aaKnown RBP4.99□□□□□ -1.61
CDK13-203ENST00000465643 CLIC5Q9NZA1 410 aa4.99□□□□□ -1.61
CDK13-203ENST00000465643 DERAQ9Y315 318 aa4.99□□□□□ -1.61
CDK13-203ENST00000465643 RABGAP1Q9Y3P9 1069 aa4.99□□□□□ -1.61
CDK13-203ENST00000465643 WDR33Q9C0J8 1336 aaKnown RBP4.99□□□□□ -1.61
CDK13-203ENST00000465643 A0A0G2JLL6 359 aaPredicted RBP4.98□□□□□ -1.61
CDK13-203ENST00000465643 NDUFB10O96000 172 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 GATA3P23771 443 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 SLC1A4P43007 532 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 KCNC1P48547 511 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 ANXA11P50995 505 aaKnown RBP4.98□□□□□ -1.61
CDK13-203ENST00000465643 SREBF2Q12772 1141 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 TDGQ13569 410 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 DYRK1AQ13627 763 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 CCNIQ14094 377 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 E2F2Q14209 437 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 ANKRD1Q15327 319 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 PREPLQ4J6C6 727 aaPredicted RBP4.98□□□□□ -1.61
CDK13-203ENST00000465643 TMEM196Q5HYL7 178 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 ZNF484Q5JVG2 852 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 CERCAMQ5T4B2 595 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 B3GNTL1Q67FW5 361 aaPredicted RBP4.98□□□□□ -1.61
CDK13-203ENST00000465643 PRRT2Q7Z6L0 340 aaPredicted RBP4.98□□□□□ -1.61
CDK13-203ENST00000465643 SLC22A17Q8WUG5 538 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 NACC2Q96BF6 587 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 FAM84AQ96KN4 292 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 RPAP3Q9H6T3 665 aaPredicted RBP4.98□□□□□ -1.61
CDK13-203ENST00000465643 VCPKMTQ9H867 229 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 UNKLQ9H9P5 680 aaKnown RBP4.98□□□□□ -1.61
CDK13-203ENST00000465643 PLEKHA5Q9HAU0 1116 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 TBC1D22BQ9NU19 505 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 HSF4Q9ULV5 492 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 CLCA2Q9UQC9 943 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 M0QZQ0 153 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 ZBTB43O43298 467 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 DHX16O60231 1041 aaKnown RBP4.98□□□□□ -1.61
CDK13-203ENST00000465643 ZNF500O60304 480 aaPredicted RBP4.98□□□□□ -1.61
CDK13-203ENST00000465643 GOLGA8HP0CJ92 632 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 RBL1P28749 1068 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 CD6P30203 668 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 NPTX2P47972 431 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 EPHB4P54760 987 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 FAM3BP58499 235 aaPredicted RBP4.98□□□□□ -1.61
CDK13-203ENST00000465643 DCAF7P61962 342 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 IRX3P78415 501 aaPredicted RBP4.98□□□□□ -1.61
CDK13-203ENST00000465643 TSTQ16762 297 aaKnown RBP4.98□□□□□ -1.61
CDK13-203ENST00000465643 TREML2Q5T2D2 321 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 SLC9A4Q6AI14 798 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 ABRAQ8N0Z2 381 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 LGI4Q8N135 537 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 GMCL1P1Q8NEA9 526 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 CTCFLQ8NI51 663 aaPredicted RBP4.98□□□□□ -1.61
CDK13-203ENST00000465643 KCNG4Q8TDN1 519 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 WDR60Q8WVS4 1066 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 ATRIPQ8WXE1 791 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 ATG4AQ8WYN0 398 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 CPT1BQ92523 772 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 CENPIQ92674 756 aaPredicted RBP4.98□□□□□ -1.61
CDK13-203ENST00000465643 MIEF2Q96C03 454 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 SDCCAG3Q96C92 435 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 MNTQ99583 582 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 HERC2P3Q9BVR0 1158 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 ACAD9Q9H845 621 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 JMJD4Q9H9V9 463 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 PLEKHA2Q9HB19 425 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 IL21RQ9HBE5 538 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 CNPY2Q9Y2B0 182 aa4.98□□□□□ -1.61
CDK13-203ENST00000465643 BTBD19C9JJ37 291 aa4.97□□□□□ -1.61
CDK13-203ENST00000465643 TMEM232C9JQI7 657 aa4.97□□□□□ -1.61
CDK13-203ENST00000465643 PDHXO00330 501 aa4.97□□□□□ -1.61
CDK13-203ENST00000465643 WDR46O15213 610 aaKnown RBP4.97□□□□□ -1.61
CDK13-203ENST00000465643 SPTLC2O15270 562 aa4.97□□□□□ -1.61
CDK13-203ENST00000465643 PPM1DO15297 605 aa4.97□□□□□ -1.61
CDK13-203ENST00000465643 CALM1P0DP23 149 aa4.97□□□□□ -1.61
CDK13-203ENST00000465643 CALM2P0DP24 149 aa4.97□□□□□ -1.61
CDK13-203ENST00000465643 CALM3P0DP25 149 aa4.97□□□□□ -1.61
CDK13-203ENST00000465643 PRKAR1BP31321 381 aa4.97□□□□□ -1.61
CDK13-203ENST00000465643 NOVP48745 357 aa4.97□□□□□ -1.61
CDK13-203ENST00000465643 INHBEP58166 350 aa4.97□□□□□ -1.61
CDK13-203ENST00000465643 GALNT2Q10471 571 aa4.97□□□□□ -1.61
CDK13-203ENST00000465643 TOB2Q14106 344 aaPredicted RBP4.97□□□□□ -1.61
CDK13-203ENST00000465643 GEN1Q17RS7 908 aa4.97□□□□□ -1.61
CDK13-203ENST00000465643 KIAA1755Q5JYT7 1200 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms