RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 PIP4P1Q86T03 277 aa2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 HEATR4Q86WZ0 1026 aa2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 SRRM1Q8IYB3 904 aaKnown RBP2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 ZNF366Q8N895 744 aa2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 OSR1Q8TAX0 266 aaPredicted RBP2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 TBC1D22AQ8WUA7 517 aa2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 RAB40AQ8WXH6 277 aa2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 NCSTNQ92542 709 aa2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 STAMQ92783 540 aa2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 KCNJ9Q92806 393 aa2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 KAT2BQ92831 832 aa2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 COQ8BQ96D53 544 aa2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 ZG16BQ96DA0 208 aa2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 ELP4Q96EB1 424 aa2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 RRP36Q96EU6 259 aaKnown RBP2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 ADAD1Q96M93 576 aaKnown RBP2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 SEC62Q99442 399 aaKnown RBP2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 FAM118BQ9BPY3 351 aa2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 NPLQ9BXD5 320 aaPredicted RBP2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 QTRT1Q9BXR0 403 aaKnown RBP2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 PAIP1Q9H074 479 aaKnown RBP2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 TTC12Q9H892 705 aaPredicted RBP2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 PREBQ9HCU5 417 aa2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 PDGFCQ9NRA1 345 aa2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 BEX4Q9NWD9 120 aaPredicted RBP2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 ZDHHC7Q9NXF8 308 aa2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 PPP1R14DQ9NXH3 145 aa2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 HCN3Q9P1Z3 774 aa2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 UPB1Q9UBR1 384 aa2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 FBXO40Q9UH90 709 aa2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 CNOT7Q9UIV1 285 aaKnown RBP2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 AGO2Q9UKV8 859 aaKnown RBP2.09□□□□□ -2.07
NUCKS1-202ENST00000464938 KDM3AQ9Y4C1 1321 aa2.09□□□□□ -2.08
NUCKS1-202ENST00000464938 COL3A1P02461 1466 aaPredicted RBP2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 TCRBV7S3A2A0A539 114 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 OR6C68A6NDL8 312 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 ZNF814B7Z6K7 855 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 PRPF4O43172 522 aaKnown RBP eCLIP2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 ANP32CO43423 234 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 EPB41L2O43491 1005 aaKnown RBP2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 ATG13O75143 517 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 GUCY1B2O75343 617 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 WDHD1O75717 1129 aaPredicted RBP2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 RNF8O76064 485 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 DDAH2O95865 285 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 F9P00740 461 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 URODP06132 367 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 CHRM4P08173 479 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 FGF2P09038 288 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 IFIT1P09914 478 aaKnown RBP2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 WEE2P0C1S8 567 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 FCGR2AP12318 317 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 ATP1A3P13637 1013 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 PRKCHP24723 683 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 GSTM2P28161 218 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 PGM1P36871 562 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 GALNT2Q10471 571 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 STIM1Q13586 685 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 ZNF268Q14587 947 aaPredicted RBP2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 SLC18A3Q16572 532 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 AP5B1Q2VPB7 878 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 FBXO43Q4G163 708 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 RUNDC3AQ59EK9 446 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 PIK3CD-AS1Q5SR53 167 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 SLC18B1Q6NT16 456 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 C1orf122Q6ZSJ8 110 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 FAM57BQ71RH2 274 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 H1FNTQ75WM6 255 aaPredicted RBP2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 TRIM74Q86UV6 250 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 TRIM73Q86UV7 250 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 KLBQ86Z14 1044 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 VPS52Q8N1B4 723 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 TMEM217Q8N7C4 229 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 SCAIQ8N9R8 606 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 RFWD2Q8NHY2 731 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 TMEM170AQ8WVE7 144 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 RNF125Q96EQ8 232 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 APOPT1Q96IL0 206 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 TEFMQ96QE5 360 aaKnown RBP2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 CD180Q99467 661 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 SH2D3AQ9BRG2 576 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 WDR83Q9BRX9 315 aaKnown RBP2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 SLC26A6Q9BXS9 759 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 CADM1Q9BY67 442 aaKnown RBP2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 PRSS22Q9GZN4 317 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 INTS2Q9H0H0 1204 aaKnown RBP2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 ZNF304Q9HCX3 659 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 PAPOLBQ9NRJ5 636 aaKnown RBP2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 ADARB2Q9NS39 739 aaKnown RBP2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 ATP8A2Q9NTI2 1148 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 ARL15Q9NXU5 204 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 GRHL1Q9NZI5 618 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 NLKQ9UBE8 527 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 FBXO4Q9UKT5 387 aa2.08□□□□□ -2.08
NUCKS1-202ENST00000464938 ICKQ9UPZ9 632 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms