RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 PPM1HQ9ULR3 514 aa13.68□□□□□ -0.22
MRPL55-224ENST00000464148 NAV2Q8IVL1 2488 aa13.68□□□□□ -0.22
MRPL55-224ENST00000464148 PIEZO2Q9H5I5 2752 aa13.67□□□□□ -0.22
MRPL55-224ENST00000464148 A0A1W2PQU0 124 aa13.67□□□□□ -0.22
MRPL55-224ENST00000464148 ALOX15BO15296 676 aa13.67□□□□□ -0.22
MRPL55-224ENST00000464148 PIAS2O75928 621 aa13.67□□□□□ -0.22
MRPL55-224ENST00000464148 AKT2P31751 481 aa13.67□□□□□ -0.22
MRPL55-224ENST00000464148 OXCT1P55809 520 aa13.67□□□□□ -0.22
MRPL55-224ENST00000464148 DLG2Q15700 870 aa13.67□□□□□ -0.22
MRPL55-224ENST00000464148 RABGAP1LQ5R372 815 aa13.67□□□□□ -0.22
MRPL55-224ENST00000464148 TTC39BQ5VTQ0 682 aaPredicted RBP13.67□□□□□ -0.22
MRPL55-224ENST00000464148 SYPL2Q5VXT5 272 aa13.67□□□□□ -0.22
MRPL55-224ENST00000464148 Q6ZVU0 165 aa13.67□□□□□ -0.22
MRPL55-224ENST00000464148 SMYD4Q8IYR2 804 aaPredicted RBP13.67□□□□□ -0.22
MRPL55-224ENST00000464148 ATP6V0D2Q8N8Y2 350 aa13.67□□□□□ -0.22
MRPL55-224ENST00000464148 TMEM145Q8NBT3 493 aa13.67□□□□□ -0.22
MRPL55-224ENST00000464148 OR13H1Q8NG92 308 aa13.67□□□□□ -0.22
MRPL55-224ENST00000464148 IFI44Q8TCB0 444 aa13.67□□□□□ -0.22
MRPL55-224ENST00000464148 ERCC4Q92889 916 aaPredicted RBP13.67□□□□□ -0.22
MRPL55-224ENST00000464148 RNF34Q969K3 372 aa13.67□□□□□ -0.22
MRPL55-224ENST00000464148 PPP1R9BQ96SB3 815 aa13.67□□□□□ -0.22
MRPL55-224ENST00000464148 TRIM62Q9BVG3 475 aa13.67□□□□□ -0.22
MRPL55-224ENST00000464148 USP29Q9HBJ7 922 aa13.67□□□□□ -0.22
MRPL55-224ENST00000464148 FZD3Q9NPG1 666 aa13.67□□□□□ -0.22
MRPL55-224ENST00000464148 SATB2Q9UPW6 733 aa13.67□□□□□ -0.22
MRPL55-224ENST00000464148 HPSEQ9Y251 543 aa13.67□□□□□ -0.22
MRPL55-224ENST00000464148 DOCK9Q9BZ29 2069 aa13.67□□□□□ -0.22
MRPL55-224ENST00000464148 COL6A6A6NMZ7 2263 aa13.66□□□□□ -0.22
MRPL55-224ENST00000464148 TCAF2A6NFQ2 919 aa13.66□□□□□ -0.22
MRPL55-224ENST00000464148 KCNU1A8MYU2 1149 aa13.66□□□□□ -0.22
MRPL55-224ENST00000464148 RNF225M0QZC1 329 aaPredicted RBP13.66□□□□□ -0.22
MRPL55-224ENST00000464148 MCF2LO15068 1137 aa13.66□□□□□ -0.22
MRPL55-224ENST00000464148 ATP9BO43861 1147 aa13.66□□□□□ -0.22
MRPL55-224ENST00000464148 WISP1O95388 367 aa13.66□□□□□ -0.22
MRPL55-224ENST00000464148 CALCAP01258 141 aa13.66□□□□□ -0.22
MRPL55-224ENST00000464148 NDUFA8P51970 172 aa13.66□□□□□ -0.22
MRPL55-224ENST00000464148 PLK1P53350 603 aa13.66□□□□□ -0.22
MRPL55-224ENST00000464148 TAS2R38P59533 333 aa13.66□□□□□ -0.22
MRPL55-224ENST00000464148 CCDC15Q0P6D6 951 aa13.66□□□□□ -0.22
MRPL55-224ENST00000464148 ISXQ2M1V0 245 aa13.66□□□□□ -0.22
MRPL55-224ENST00000464148 ZNF542PQ5EBM4 170 aa13.66□□□□□ -0.22
MRPL55-224ENST00000464148 KIAA1614Q5VZ46 1190 aa13.66□□□□□ -0.22
MRPL55-224ENST00000464148 NEK5Q6P3R8 708 aa13.66□□□□□ -0.22
MRPL55-224ENST00000464148 PRICKLE2Q7Z3G6 844 aa13.66□□□□□ -0.22
MRPL55-224ENST00000464148 PPM1KQ8N3J5 372 aa13.66□□□□□ -0.22
MRPL55-224ENST00000464148 SNRNP27Q8WVK2 155 aaKnown RBP13.66□□□□□ -0.22
MRPL55-224ENST00000464148 CCDC97Q96F63 343 aaPredicted RBP13.66□□□□□ -0.22
MRPL55-224ENST00000464148 TSG101Q99816 390 aa13.66□□□□□ -0.22
MRPL55-224ENST00000464148 ZSWIM1Q9BR11 485 aa13.66□□□□□ -0.22
MRPL55-224ENST00000464148 DUSP23Q9BVJ7 150 aa13.66□□□□□ -0.22
MRPL55-224ENST00000464148 DYRK4Q9NR20 520 aa13.66□□□□□ -0.22
MRPL55-224ENST00000464148 WDR70Q9NW82 654 aa13.66□□□□□ -0.22
MRPL55-224ENST00000464148 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.66□□□□□ -0.22
MRPL55-224ENST00000464148 DNAJC28Q9NX36 388 aa13.66□□□□□ -0.22
MRPL55-224ENST00000464148 FARP1Q9Y4F1 1045 aaPredicted RBP13.66□□□□□ -0.22
MRPL55-224ENST00000464148 TDRD6O60522 2096 aaKnown RBP13.65□□□□□ -0.22
MRPL55-224ENST00000464148 CPED1A4D0V7 1026 aa13.65□□□□□ -0.22
MRPL55-224ENST00000464148 K7ENP7 123 aa13.65□□□□□ -0.22
MRPL55-224ENST00000464148 K7ESM1 405 aa13.65□□□□□ -0.22
MRPL55-224ENST00000464148 KPNA3O00505 521 aaPredicted RBP13.65□□□□□ -0.22
MRPL55-224ENST00000464148 SCAMP1O15126 338 aa13.65□□□□□ -0.22
MRPL55-224ENST00000464148 SLC16A3O15427 465 aaKnown RBP13.65□□□□□ -0.22
MRPL55-224ENST00000464148 NEBLO76041 1014 aa13.65□□□□□ -0.22
MRPL55-224ENST00000464148 PCDH8O95206 1070 aa13.65□□□□□ -0.22
MRPL55-224ENST00000464148 TRUB2O95900 331 aaKnown RBP13.65□□□□□ -0.22
MRPL55-224ENST00000464148 GIMD1P0DJR0 217 aa13.65□□□□□ -0.22
MRPL55-224ENST00000464148 KRT10P13645 584 aa13.65□□□□□ -0.22
MRPL55-224ENST00000464148 HNRNPA2B1P22626 353 aaKnown RBP13.65□□□□□ -0.22
MRPL55-224ENST00000464148 CLDN2P57739 230 aa13.65□□□□□ -0.22
MRPL55-224ENST00000464148 HNRNPKP61978 463 aaKnown RBP eCLIP13.65□□□□□ -0.22
MRPL55-224ENST00000464148 ZNF284Q2VY69 593 aa13.65□□□□□ -0.22
MRPL55-224ENST00000464148 PIP5KL1Q5T9C9 394 aa13.65□□□□□ -0.22
MRPL55-224ENST00000464148 CXorf57Q6NSI4 855 aaKnown RBP13.65□□□□□ -0.22
MRPL55-224ENST00000464148 INO80CQ6PI98 192 aaPredicted RBP13.65□□□□□ -0.22
MRPL55-224ENST00000464148 FOXR1Q6PIV2 292 aa13.65□□□□□ -0.22
MRPL55-224ENST00000464148 CCDC81Q6ZN84 652 aa13.65□□□□□ -0.22
MRPL55-224ENST00000464148 PTAR1Q7Z6K3 402 aaPredicted RBP13.65□□□□□ -0.22
MRPL55-224ENST00000464148 HORMAD1Q86X24 394 aa13.65□□□□□ -0.22
MRPL55-224ENST00000464148 IFT43Q96FT9 208 aa13.65□□□□□ -0.22
MRPL55-224ENST00000464148 ATXN7L3BQ96GX2 97 aa13.65□□□□□ -0.22
MRPL55-224ENST00000464148 SPATA32Q96LK8 384 aa13.65□□□□□ -0.22
MRPL55-224ENST00000464148 SLC46A1Q96NT5 459 aa13.65□□□□□ -0.22
MRPL55-224ENST00000464148 NT5C1BQ96P26 610 aa13.65□□□□□ -0.22
MRPL55-224ENST00000464148 NOX5Q96PH1 765 aa13.65□□□□□ -0.22
MRPL55-224ENST00000464148 FEM1AQ9BSK4 669 aa13.65□□□□□ -0.22
MRPL55-224ENST00000464148 CAAP1Q9H8G2 361 aa13.65□□□□□ -0.22
MRPL55-224ENST00000464148 POPDC2Q9HBU9 364 aa13.65□□□□□ -0.22
MRPL55-224ENST00000464148 ARMCX3Q9UH62 379 aaPredicted RBP13.65□□□□□ -0.22
MRPL55-224ENST00000464148 VPS28Q9UK41 221 aa13.65□□□□□ -0.22
MRPL55-224ENST00000464148 SYNJ2BP-COX16A0A087WUM0 186 aa13.64□□□□□ -0.23
MRPL55-224ENST00000464148 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.64□□□□□ -0.23
MRPL55-224ENST00000464148 LY6G6EA0A0G2JKS1 128 aa13.64□□□□□ -0.23
MRPL55-224ENST00000464148 A6NNZ2 444 aa13.64□□□□□ -0.23
MRPL55-224ENST00000464148 TGM2P21980 687 aa13.64□□□□□ -0.23
MRPL55-224ENST00000464148 ACADSBP45954 432 aa13.64□□□□□ -0.23
MRPL55-224ENST00000464148 VASPP50552 380 aaPredicted RBP13.64□□□□□ -0.23
MRPL55-224ENST00000464148 FKBP3Q00688 224 aaKnown RBP13.64□□□□□ -0.23
MRPL55-224ENST00000464148 ZNF177Q13360 481 aaPredicted RBP13.64□□□□□ -0.23
MRPL55-224ENST00000464148 CDKN3Q16667 212 aa13.64□□□□□ -0.23
MRPL55-224ENST00000464148 OR6B2Q6IFH4 312 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms