RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 RSPH3Q86UC2 560 aa7.82□□□□□ -1.16
UBE4B-204ENST00000462658 SESTD1Q86VW0 696 aa7.82□□□□□ -1.16
UBE4B-204ENST00000462658 CDR2LQ86X02 465 aaPredicted RBP7.82□□□□□ -1.16
UBE4B-204ENST00000462658 TMTC1Q8IUR5 882 aa7.82□□□□□ -1.16
UBE4B-204ENST00000462658 TMEM139Q8IV31 216 aa7.82□□□□□ -1.16
UBE4B-204ENST00000462658 CPB2Q96IY4 423 aa7.82□□□□□ -1.16
UBE4B-204ENST00000462658 ZNF512Q96ME7 567 aaPredicted RBP7.82□□□□□ -1.16
UBE4B-204ENST00000462658 C8orf49Q96NF6 230 aa7.82□□□□□ -1.16
UBE4B-204ENST00000462658 SAMD11Q96NU1 681 aa7.82□□□□□ -1.16
UBE4B-204ENST00000462658 FNBP1Q96RU3 617 aa7.82□□□□□ -1.16
UBE4B-204ENST00000462658 UHRF1Q96T88 793 aaPredicted RBP7.82□□□□□ -1.16
UBE4B-204ENST00000462658 NAA15Q9BXJ9 866 aaKnown RBP7.82□□□□□ -1.16
UBE4B-204ENST00000462658 TMEM117Q9H0C3 514 aa7.82□□□□□ -1.16
UBE4B-204ENST00000462658 GANQ9H2C0 597 aa7.82□□□□□ -1.16
UBE4B-204ENST00000462658 EPC1Q9H2F5 836 aa7.82□□□□□ -1.16
UBE4B-204ENST00000462658 MSL2Q9HCI7 577 aa7.82□□□□□ -1.16
UBE4B-204ENST00000462658 TMEM8AQ9HCN3 771 aa7.82□□□□□ -1.16
UBE4B-204ENST00000462658 PDE11AQ9HCR9 933 aa7.82□□□□□ -1.16
UBE4B-204ENST00000462658 ZNHIT6Q9NWK9 470 aaKnown RBP7.82□□□□□ -1.16
UBE4B-204ENST00000462658 RBAKQ9NYW8 714 aaPredicted RBP7.82□□□□□ -1.16
UBE4B-204ENST00000462658 GCNT4Q9P109 453 aa7.82□□□□□ -1.16
UBE4B-204ENST00000462658 CEP72Q9P209 647 aa7.82□□□□□ -1.16
UBE4B-204ENST00000462658 GRIN2DO15399 1336 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 A0A1B0GUA9 196 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 FAM189A1O60320 539 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 TSPAN1O60635 241 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 MCF2P10911 925 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 UCHL3P15374 230 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 ARF4P18085 180 aaPredicted RBP7.81□□□□□ -1.16
UBE4B-204ENST00000462658 TNNI1P19237 187 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 EN2P19622 333 aaPredicted RBP7.81□□□□□ -1.16
UBE4B-204ENST00000462658 TNFSF9P41273 254 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 SLC6A9P48067 706 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 GZMKP49863 264 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 MXI1P50539 228 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 PER3P56645 1201 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 APBA1Q02410 837 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 PIN1Q13526 163 aaPredicted RBP7.81□□□□□ -1.16
UBE4B-204ENST00000462658 ITGA7Q13683 1181 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 PTGISQ16647 500 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 KYAT1Q16773 422 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 EPC2Q52LR7 807 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 PDXDC1Q6P996 788 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 CYP26C1Q6V0L0 522 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 Q6ZSN1 163 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 CATSPER4Q7RTX7 472 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 SERINC5Q86VE9 423 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 BRSK2Q8IWQ3 736 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 THNSL1Q8IYQ7 743 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 PQLC1Q8N2U9 271 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 ZNF808Q8N4W9 903 aaPredicted RBP7.81□□□□□ -1.16
UBE4B-204ENST00000462658 OR7D4Q8NG98 312 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 LMO3Q8TAP4 145 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 RAB24Q969Q5 203 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 GLT1D1Q96MS3 346 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 CGRRF1Q99675 332 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 ADPGKQ9BRR6 497 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.81□□□□□ -1.16
UBE4B-204ENST00000462658 INTS2Q9H0H0 1204 aaKnown RBP7.81□□□□□ -1.16
UBE4B-204ENST00000462658 CDT1Q9H211 546 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 PDZD7Q9H5P4 517 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 SIX2Q9NPC8 291 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 NLRC4Q9NPP4 1024 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 FBXL5Q9UKA1 691 aa7.81□□□□□ -1.16
UBE4B-204ENST00000462658 CPSF3Q9UKF6 684 aaKnown RBP7.81□□□□□ -1.16
UBE4B-204ENST00000462658 RANBP2P49792 3224 aaKnown RBP7.81□□□□□ -1.16
UBE4B-204ENST00000462658 CEP290O15078 2479 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 DNAH12Q6ZR08 3092 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 EVPLQ92817 2033 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 CCDC154A6NI56 674 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 LRRC53A6NM62 1247 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 KBTBD13C9JR72 458 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 M0QZ92 97 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 HOXA3O43365 443 aaPredicted RBP7.8□□□□□ -1.16
UBE4B-204ENST00000462658 HTRA2O43464 458 aaPredicted RBP7.8□□□□□ -1.16
UBE4B-204ENST00000462658 ZNF500O60304 480 aaPredicted RBP7.8□□□□□ -1.16
UBE4B-204ENST00000462658 ABLIM3O94929 683 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 IL33O95760 270 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 RPLP2P05387 115 aaKnown RBP7.8□□□□□ -1.16
UBE4B-204ENST00000462658 CLTAP09496 248 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 STAG3L1P0CL83 205 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 COMTP21964 271 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 AXLP30530 894 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 HOXA11P31270 313 aaPredicted RBP7.8□□□□□ -1.16
UBE4B-204ENST00000462658 HNRNPH3P31942 346 aaKnown RBP7.8□□□□□ -1.16
UBE4B-204ENST00000462658 CRHR1P34998 444 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 PTPN7P35236 360 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 SLC16A1P53985 500 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 EPHB1P54762 984 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 OSTNP61366 133 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 MRPS6P82932 125 aaKnown RBP7.8□□□□□ -1.16
UBE4B-204ENST00000462658 MRPL49Q13405 166 aaKnown RBP7.8□□□□□ -1.16
UBE4B-204ENST00000462658 IL10RAQ13651 578 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 MEA1Q16626 185 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 C3orf36Q3SXR2 165 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 SLC9C1Q4G0N8 1177 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 TMEM240Q5SV17 173 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 SFMBT2Q5VUG0 894 aa7.8□□□□□ -1.16
UBE4B-204ENST00000462658 LMBRD2Q68DH5 695 aaPredicted RBP7.8□□□□□ -1.16
UBE4B-204ENST00000462658 GJB7Q6PEY0 223 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms