RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 UPK3BL2E5RIL1 263 aa16.9■□□□□ 0.3
SHANK2-213ENST00000460048 BCAT2O15382 392 aaPredicted RBP16.9■□□□□ 0.3
SHANK2-213ENST00000460048 GJB3O75712 270 aa16.9■□□□□ 0.3
SHANK2-213ENST00000460048 MT-CO1P00395 513 aa16.9■□□□□ 0.3
SHANK2-213ENST00000460048 SERPINC1P01008 464 aa16.9■□□□□ 0.3
SHANK2-213ENST00000460048 CSRP1P21291 193 aaKnown RBP16.9■□□□□ 0.3
SHANK2-213ENST00000460048 PRKCIP41743 596 aa16.9■□□□□ 0.3
SHANK2-213ENST00000460048 PSMD8P48556 350 aa16.9■□□□□ 0.3
SHANK2-213ENST00000460048 ZNF143P52747 638 aaPredicted RBP16.9■□□□□ 0.3
SHANK2-213ENST00000460048 ATXN3P54252 364 aaPredicted RBP16.9■□□□□ 0.3
SHANK2-213ENST00000460048 GALCP54803 685 aa16.9■□□□□ 0.3
SHANK2-213ENST00000460048 RPL7AP62424 266 aaKnown RBP16.9■□□□□ 0.3
SHANK2-213ENST00000460048 GRIK2Q13002 908 aa16.9■□□□□ 0.3
SHANK2-213ENST00000460048 SEMA3BQ13214 749 aa16.9■□□□□ 0.3
SHANK2-213ENST00000460048 FIGNQ5HY92 759 aa16.9■□□□□ 0.3
SHANK2-213ENST00000460048 DNAJC24Q6P3W2 148 aa16.9■□□□□ 0.3
SHANK2-213ENST00000460048 ZNF783Q6ZMS7 281 aa16.9■□□□□ 0.3
SHANK2-213ENST00000460048 MINDY1Q8N5J2 469 aa16.9■□□□□ 0.3
SHANK2-213ENST00000460048 CCDC185Q8N715 623 aa16.9■□□□□ 0.3
SHANK2-213ENST00000460048 OR7D4Q8NG98 312 aa16.9■□□□□ 0.3
SHANK2-213ENST00000460048 OR2I1PQ8NGU4 316 aa16.9■□□□□ 0.3
SHANK2-213ENST00000460048 GANCQ8TET4 914 aa16.9■□□□□ 0.3
SHANK2-213ENST00000460048 FAM131CQ96AQ9 280 aa16.9■□□□□ 0.3
SHANK2-213ENST00000460048 VCPIP1Q96JH7 1222 aa16.9■□□□□ 0.3
SHANK2-213ENST00000460048 ORAI3Q9BRQ5 295 aa16.9■□□□□ 0.3
SHANK2-213ENST00000460048 MAGEB5Q9BZ81 275 aa16.9■□□□□ 0.3
SHANK2-213ENST00000460048 ZDHHC5Q9C0B5 715 aa16.9■□□□□ 0.3
SHANK2-213ENST00000460048 RETREG1Q9H6L5 497 aa16.9■□□□□ 0.3
SHANK2-213ENST00000460048 OSGEPQ9NPF4 335 aa16.9■□□□□ 0.3
SHANK2-213ENST00000460048 DNAAF2Q9NVR5 837 aaKnown RBP16.9■□□□□ 0.3
SHANK2-213ENST00000460048 OR12D3Q9UGF7 316 aa16.9■□□□□ 0.3
SHANK2-213ENST00000460048 NEU3Q9UQ49 428 aa16.9■□□□□ 0.3
SHANK2-213ENST00000460048 NCOR2Q9Y618 2525 aa16.9■□□□□ 0.3
SHANK2-213ENST00000460048 FAM72CH0Y354 149 aa16.89■□□□□ 0.29
SHANK2-213ENST00000460048 MCF2LO15068 1137 aa16.89■□□□□ 0.29
SHANK2-213ENST00000460048 ALOX15BO15296 676 aa16.89■□□□□ 0.29
SHANK2-213ENST00000460048 CCP110O43303 1012 aa16.89■□□□□ 0.29
SHANK2-213ENST00000460048 RNASEH2AO75792 299 aaKnown RBP16.89■□□□□ 0.29
SHANK2-213ENST00000460048 IL1BP01584 269 aa16.89■□□□□ 0.29
SHANK2-213ENST00000460048 IGHV4-34P06331 123 aa16.89■□□□□ 0.29
SHANK2-213ENST00000460048 GOT1P17174 413 aa16.89■□□□□ 0.29
SHANK2-213ENST00000460048 RRM1P23921 792 aa16.89■□□□□ 0.29
SHANK2-213ENST00000460048 DRD3P35462 400 aa16.89■□□□□ 0.29
SHANK2-213ENST00000460048 PBX1P40424 430 aa16.89■□□□□ 0.29
SHANK2-213ENST00000460048 FANCCQ00597 558 aa16.89■□□□□ 0.29
SHANK2-213ENST00000460048 BNC1Q01954 994 aa16.89■□□□□ 0.29
SHANK2-213ENST00000460048 SCAPQ12770 1279 aa16.89■□□□□ 0.29
SHANK2-213ENST00000460048 ASIC2Q16515 512 aa16.89■□□□□ 0.29
SHANK2-213ENST00000460048 ACCSLQ4AC99 568 aa16.89■□□□□ 0.29
SHANK2-213ENST00000460048 N4BP2L1Q5TBK1 243 aaPredicted RBP16.89■□□□□ 0.29
SHANK2-213ENST00000460048 FAM72AQ5TYM5 149 aa16.89■□□□□ 0.29
SHANK2-213ENST00000460048 SFMBT2Q5VUG0 894 aa16.89■□□□□ 0.29
SHANK2-213ENST00000460048 KIAA0895LQ68EN5 471 aa16.89■□□□□ 0.29
SHANK2-213ENST00000460048 FAM72DQ6L9T8 149 aa16.89■□□□□ 0.29
SHANK2-213ENST00000460048 PSAPL1Q6NUJ1 521 aa16.89■□□□□ 0.29
SHANK2-213ENST00000460048 PPP1R2P3Q6NXS1 205 aa16.89■□□□□ 0.29
SHANK2-213ENST00000460048 Q6ZVU0 165 aa16.89■□□□□ 0.29
SHANK2-213ENST00000460048 ZNF571Q7Z3V5 609 aaPredicted RBP16.89■□□□□ 0.29
SHANK2-213ENST00000460048 NLRP14Q86W24 1093 aa16.89■□□□□ 0.29
SHANK2-213ENST00000460048 FAM72BQ86X60 149 aa16.89■□□□□ 0.29
SHANK2-213ENST00000460048 HDDC3Q8N4P3 179 aa16.89■□□□□ 0.29
SHANK2-213ENST00000460048 OR8D1Q8WZ84 308 aa16.89■□□□□ 0.29
SHANK2-213ENST00000460048 SNX19Q92543 992 aa16.89■□□□□ 0.29
SHANK2-213ENST00000460048 MCEEQ96PE7 176 aa16.89■□□□□ 0.29
SHANK2-213ENST00000460048 OMDQ99983 421 aa16.89■□□□□ 0.29
SHANK2-213ENST00000460048 HAUS4Q9H6D7 363 aa16.89■□□□□ 0.29
SHANK2-213ENST00000460048 SARDHQ9UL12 918 aa16.89■□□□□ 0.29
SHANK2-213ENST00000460048 PPM1HQ9ULR3 514 aa16.89■□□□□ 0.29
SHANK2-213ENST00000460048 K7ERQ8 282 aa16.88■□□□□ 0.29
SHANK2-213ENST00000460048 GIPC1O14908 333 aa16.88■□□□□ 0.29
SHANK2-213ENST00000460048 OPHN1O60890 802 aa16.88■□□□□ 0.29
SHANK2-213ENST00000460048 ZMPSTE24O75844 475 aa16.88■□□□□ 0.29
SHANK2-213ENST00000460048 LRIG2O94898 1065 aa16.88■□□□□ 0.29
SHANK2-213ENST00000460048 FSBPO95073 299 aa16.88■□□□□ 0.29
SHANK2-213ENST00000460048 PLEKP08567 350 aaPredicted RBP16.88■□□□□ 0.29
SHANK2-213ENST00000460048 CEACAM1P13688 526 aa16.88■□□□□ 0.29
SHANK2-213ENST00000460048 KCNA4P22459 653 aa16.88■□□□□ 0.29
SHANK2-213ENST00000460048 GLDCP23378 1020 aa16.88■□□□□ 0.29
SHANK2-213ENST00000460048 CD27P26842 260 aa16.88■□□□□ 0.29
SHANK2-213ENST00000460048 NOVA1P51513 510 aaKnown RBP16.88■□□□□ 0.29
SHANK2-213ENST00000460048 CLCN6P51797 869 aa16.88■□□□□ 0.29
SHANK2-213ENST00000460048 METAP1P53582 386 aa16.88■□□□□ 0.29
SHANK2-213ENST00000460048 TPM4P67936 248 aa16.88■□□□□ 0.29
SHANK2-213ENST00000460048 GNA12Q03113 381 aa16.88■□□□□ 0.29
SHANK2-213ENST00000460048 NCEH1Q6PIU2 408 aa16.88■□□□□ 0.29
SHANK2-213ENST00000460048 LRSAM1Q6UWE0 723 aa16.88■□□□□ 0.29
SHANK2-213ENST00000460048 DSG4Q86SJ6 1040 aa16.88■□□□□ 0.29
SHANK2-213ENST00000460048 PIP4P1Q86T03 277 aa16.88■□□□□ 0.29
SHANK2-213ENST00000460048 ATP11CQ8NB49 1132 aa16.88■□□□□ 0.29
SHANK2-213ENST00000460048 OR2T34Q8NGX1 318 aa16.88■□□□□ 0.29
SHANK2-213ENST00000460048 NDFIP2Q9NV92 336 aa16.88■□□□□ 0.29
SHANK2-213ENST00000460048 TMEM248Q9NWD8 314 aa16.88■□□□□ 0.29
SHANK2-213ENST00000460048 ANKRD62A6NC57 917 aa16.87■□□□□ 0.29
SHANK2-213ENST00000460048 LRRC72A6NJI9 287 aa16.87■□□□□ 0.29
SHANK2-213ENST00000460048 TMCO5BA8MYB1 307 aa16.87■□□□□ 0.29
SHANK2-213ENST00000460048 DDX3XO00571 662 aaKnown RBP eCLIP16.87■□□□□ 0.29
SHANK2-213ENST00000460048 SMAD6O43541 496 aaKnown RBP16.87■□□□□ 0.29
SHANK2-213ENST00000460048 GZMAP12544 262 aa16.87■□□□□ 0.29
SHANK2-213ENST00000460048 CD59P13987 128 aa16.87■□□□□ 0.29
SHANK2-213ENST00000460048 RHOQP17081 205 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms