RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 DDX56Q9NY93 547 aaKnown RBP11.12□□□□□ -0.63
CCDC12-204ENST00000460035 RCOR3Q9P2K3 495 aaPredicted RBP11.12□□□□□ -0.63
CCDC12-204ENST00000460035 SUN2Q9UH99 717 aa11.12□□□□□ -0.63
CCDC12-204ENST00000460035 PPP2R2CQ9Y2T4 447 aa11.12□□□□□ -0.63
CCDC12-204ENST00000460035 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.12□□□□□ -0.63
CCDC12-204ENST00000460035 CXorf51AA0A1B0GTR3 108 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 GRID2IPA4D2P6 1211 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 TTC34A8MYJ7 566 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 RASA4BC9J798 803 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 RASA4O43374 803 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 PALMO75781 387 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 ALDH1A2O94788 518 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 SRPRAP08240 638 aaKnown RBP11.11□□□□□ -0.63
CCDC12-204ENST00000460035 GLDCP23378 1020 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 PRKCHP24723 683 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 PXNP49023 591 aaPredicted RBP11.11□□□□□ -0.63
CCDC12-204ENST00000460035 STK19P49842 368 aaPredicted RBP11.11□□□□□ -0.63
CCDC12-204ENST00000460035 VASPP50552 380 aaPredicted RBP11.11□□□□□ -0.63
CCDC12-204ENST00000460035 DGKEP52429 567 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 YBEYP58557 167 aaPredicted RBP11.11□□□□□ -0.63
CCDC12-204ENST00000460035 DPYSL3Q14195 570 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 ANKRD20A8PQ5CZ79 823 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 RETSATQ6NUM9 610 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 TMCO3Q6UWJ1 677 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 TMEM92Q6UXU6 159 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 LINGO4Q6UY18 593 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 PEX26Q7Z412 305 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 VSIG1Q86XK7 387 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 SYCE1Q8N0S2 351 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 UMODL1-AS1Q8N2C9 162 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 RNF10Q8N5U6 811 aaKnown RBP11.11□□□□□ -0.63
CCDC12-204ENST00000460035 LRRC57Q8N9N7 239 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 DCAF4L2Q8NA75 395 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 ATP11CQ8NB49 1132 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 KDM1BQ8NB78 822 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 NETO2Q8NC67 525 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 HMCESQ96FZ2 354 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 MRGPRX3Q96LB0 322 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 PSMB7Q99436 277 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 PRRX2Q99811 253 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 GABRG3Q99928 467 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 SLC39A8Q9C0K1 460 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 KCNF1Q9H3M0 494 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 MTG2Q9H4K7 406 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 BCCIPQ9P287 314 aaKnown RBP eCLIP11.11□□□□□ -0.63
CCDC12-204ENST00000460035 VPS51Q9UID3 782 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 FBXO4Q9UKT5 387 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 AMFRQ9UKV5 643 aa11.11□□□□□ -0.63
CCDC12-204ENST00000460035 TNRC6BQ9UPQ9 1833 aaKnown RBP11.11□□□□□ -0.63
CCDC12-204ENST00000460035 TCRBV21S2A2A0A5A6 115 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 ARHGAP42A6NI28 874 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 ZNF487B1APH4 448 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 H0Y858 1186 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 DFFAO00273 331 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 PSTPIP1O43586 416 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 KDELR3O43731 214 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 ZRANB2O95218 330 aaKnown RBP eCLIP11.1□□□□□ -0.635e-8■■■■□ 20.2
CCDC12-204ENST00000460035 APBB3O95704 486 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 FTCDO95954 541 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 MT-CO1P00395 513 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 SP9P0CG40 484 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 COL9A1P20849 921 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 IL4RP24394 825 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 HOXA6P31267 233 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 PAPOLAP51003 745 aaKnown RBP11.1□□□□□ -0.63
CCDC12-204ENST00000460035 DNA2P51530 1060 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 NDST2P52849 883 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 SLC20A2Q08357 652 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 DLG2Q15700 870 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 PARP15Q460N3 678 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 ANO7Q6IWH7 933 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 KIAA1211LQ6NV74 962 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 LEKR1Q6ZMV7 388 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 RFX6Q8HWS3 928 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 RCOR2Q8IZ40 523 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 MAML2Q8IZL2 1156 aaPredicted RBP11.1□□□□□ -0.63
CCDC12-204ENST00000460035 CAMKK1Q8N5S9 505 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 LZTR1Q8N653 840 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.1□□□□□ -0.63
CCDC12-204ENST00000460035 HMGB4Q8WW32 186 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 FAF2Q96CS3 445 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 MYO19Q96H55 970 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 ZNF670Q9BS34 389 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 ACE2Q9BYF1 805 aaPredicted RBP11.1□□□□□ -0.63
CCDC12-204ENST00000460035 KLC2Q9H0B6 622 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 KCNH6Q9H252 994 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 TMEM245Q9H330 911 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 NOL6Q9H6R4 1146 aaKnown RBP11.1□□□□□ -0.63
CCDC12-204ENST00000460035 ETNK2Q9NVF9 386 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 HCN4Q9Y3Q4 1203 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 MFHAS1Q9Y4C4 1052 aa11.1□□□□□ -0.63
CCDC12-204ENST00000460035 LRRK1Q38SD2 2015 aa11.09□□□□□ -0.63
CCDC12-204ENST00000460035 TRPM6Q9BX84 2022 aa11.09□□□□□ -0.63
CCDC12-204ENST00000460035 A0A1W2PQF6 199 aa11.09□□□□□ -0.63
CCDC12-204ENST00000460035 K7ERQ8 282 aa11.09□□□□□ -0.63
CCDC12-204ENST00000460035 K7ESF4 209 aa11.09□□□□□ -0.63
CCDC12-204ENST00000460035 DCLK1O15075 740 aa11.09□□□□□ -0.63
CCDC12-204ENST00000460035 ZSCAN12O43309 604 aa11.09□□□□□ -0.63
CCDC12-204ENST00000460035 BNIP3LO60238 219 aa11.09□□□□□ -0.63
CCDC12-204ENST00000460035 ZMPSTE24O75844 475 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms