RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 APOC2P02655 101 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 CKMP06732 381 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 IVDP26440 423 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 SLC11A2P49281 568 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 SEMA3BQ13214 749 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 TSNAXIP1Q2TAA8 658 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 NAIF1Q69YI7 327 aaPredicted RBP16.23■□□□□ 0.19
SNX17-204ENST00000453453 RFX8Q6ZV50 586 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 CCDC25Q86WR0 208 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.23■□□□□ 0.19
SNX17-204ENST00000453453 C1orf74Q96LT6 269 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 RMDN2Q96LZ7 410 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 TTC25Q96NG3 672 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 KLF16Q9BXK1 252 aaPredicted RBP16.23■□□□□ 0.19
SNX17-204ENST00000453453 ETNK1Q9HBU6 452 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 ANLNQ9NQW6 1124 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 SAR1AQ9NR31 198 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 NINJ2Q9NZG7 142 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 ASIC3Q9UHC3 531 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 MYO9BQ13459 2157 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 HELZP42694 1942 aaKnown RBP16.23■□□□□ 0.19
SNX17-204ENST00000453453 OLFM2O95897 454 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 IL4RP24394 825 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 NRG1Q02297 640 aaPredicted RBP16.23■□□□□ 0.19
SNX17-204ENST00000453453 LRRC14Q15048 493 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 CCNG2Q16589 344 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 SLC9A4Q6AI14 798 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 EFHBQ8N7U6 833 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 ARL14EPQ8N8R7 260 aaPredicted RBP16.23■□□□□ 0.19
SNX17-204ENST00000453453 PCDH19Q8TAB3 1148 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 UHMK1Q8TAS1 419 aaKnown RBP16.23■□□□□ 0.19
SNX17-204ENST00000453453 SHKBP1Q8TBC3 707 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 MGARPQ8TDB4 240 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 C1orf54Q8WWF1 131 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 PRCCQ92733 491 aaPredicted RBP16.23■□□□□ 0.19
SNX17-204ENST00000453453 TUBB6Q9BUF5 446 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 PITPNM3Q9BZ71 974 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 MAGEB5Q9BZ81 275 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 DCLK3Q9C098 648 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 RNF38Q9H0F5 515 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 SLC24A3Q9HC58 644 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 SSU72Q9NP77 194 aaKnown RBP16.23■□□□□ 0.19
SNX17-204ENST00000453453 ARHGEF4Q9NR80 690 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 LNPEPQ9UIQ6 1025 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 STK38LQ9Y2H1 464 aa16.23■□□□□ 0.19
SNX17-204ENST00000453453 CHD9Q3L8U1 2897 aa16.22■□□□□ 0.19
SNX17-204ENST00000453453 I6L893 689 aaPredicted RBP16.22■□□□□ 0.19
SNX17-204ENST00000453453 MCF2LO15068 1137 aa16.22■□□□□ 0.19
SNX17-204ENST00000453453 TNRC18O15417 2968 aaPredicted RBP16.22■□□□□ 0.19
SNX17-204ENST00000453453 FGF10O15520 208 aaPredicted RBP16.22■□□□□ 0.19
SNX17-204ENST00000453453 PEX11AO75192 247 aa16.22■□□□□ 0.19
SNX17-204ENST00000453453 ACSL3O95573 720 aa16.22■□□□□ 0.19
SNX17-204ENST00000453453 IRF1P10914 325 aa16.22■□□□□ 0.19
SNX17-204ENST00000453453 NEFHP12036 1026 aa16.22■□□□□ 0.19
SNX17-204ENST00000453453 KCNQ1P51787 676 aa16.22■□□□□ 0.19
SNX17-204ENST00000453453 SARNPP82979 210 aaKnown RBP16.22■□□□□ 0.19
SNX17-204ENST00000453453 MGAT5Q09328 741 aa16.22■□□□□ 0.19
SNX17-204ENST00000453453 SPARCL1Q14515 664 aa16.22■□□□□ 0.19
SNX17-204ENST00000453453 TCEAL5Q5H9L2 206 aa16.22■□□□□ 0.19
SNX17-204ENST00000453453 UBAP2Q5T6F2 1119 aaKnown RBP16.22■□□□□ 0.19
SNX17-204ENST00000453453 GPR158Q5T848 1215 aa16.22■□□□□ 0.19
SNX17-204ENST00000453453 GRASPQ7Z6J2 395 aaPredicted RBP16.22■□□□□ 0.19
SNX17-204ENST00000453453 KIF2BQ8N4N8 673 aa16.22■□□□□ 0.19
SNX17-204ENST00000453453 PQLC3Q8N755 202 aa16.22■□□□□ 0.19
SNX17-204ENST00000453453 ANKRD42Q8N9B4 389 aa16.22■□□□□ 0.19
SNX17-204ENST00000453453 ATL2Q8NHH9 583 aa16.22■□□□□ 0.19
SNX17-204ENST00000453453 AZIN2Q96A70 460 aa16.22■□□□□ 0.19
SNX17-204ENST00000453453 ZNF707Q96C28 371 aaPredicted RBP16.22■□□□□ 0.19
SNX17-204ENST00000453453 HAUS1Q96CS2 278 aa16.22■□□□□ 0.19
SNX17-204ENST00000453453 DDX50Q9BQ39 737 aaKnown RBP16.22■□□□□ 0.19
SNX17-204ENST00000453453 OSBPL1AQ9BXW6 950 aa16.22■□□□□ 0.19
SNX17-204ENST00000453453 CATSPERBQ9H7T0 1116 aa16.22■□□□□ 0.19
SNX17-204ENST00000453453 ANAPC5Q9UJX4 755 aa16.22■□□□□ 0.19
SNX17-204ENST00000453453 LSM7Q9UK45 103 aaKnown RBP16.22■□□□□ 0.19
SNX17-204ENST00000453453 HS3ST4Q9Y661 456 aa16.22■□□□□ 0.19
SNX17-204ENST00000453453 FAM72CH0Y354 149 aa16.21■□□□□ 0.19
SNX17-204ENST00000453453 STC2O76061 302 aa16.21■□□□□ 0.19
SNX17-204ENST00000453453 LRIG2O94898 1065 aa16.21■□□□□ 0.19
SNX17-204ENST00000453453 GJA1P17302 382 aa16.21■□□□□ 0.19
SNX17-204ENST00000453453 AMPD1P23109 780 aa16.21■□□□□ 0.19
SNX17-204ENST00000453453 EPHB2P29323 1055 aa16.21■□□□□ 0.19
SNX17-204ENST00000453453 CORO1AP31146 461 aaKnown RBP16.21■□□□□ 0.19
SNX17-204ENST00000453453 SERPINB6P35237 376 aa16.21■□□□□ 0.19
SNX17-204ENST00000453453 AVPR1AP37288 418 aa16.21■□□□□ 0.19
SNX17-204ENST00000453453 MLLT6P55198 1093 aaPredicted RBP16.21■□□□□ 0.19
SNX17-204ENST00000453453 SLC7A9P82251 487 aa16.21■□□□□ 0.19
SNX17-204ENST00000453453 OTUD4Q01804 1114 aaKnown RBP16.21■□□□□ 0.19
SNX17-204ENST00000453453 HYAL1Q12794 435 aa16.21■□□□□ 0.19
SNX17-204ENST00000453453 SNX1Q13596 522 aa16.21■□□□□ 0.19
SNX17-204ENST00000453453 KCNC3Q14003 757 aa16.21■□□□□ 0.19
SNX17-204ENST00000453453 DPYSQ14117 519 aa16.21■□□□□ 0.19
SNX17-204ENST00000453453 TEAD2Q15562 447 aa16.21■□□□□ 0.19
SNX17-204ENST00000453453 MS4A13Q5J8X5 152 aa16.21■□□□□ 0.19
SNX17-204ENST00000453453 FAM72AQ5TYM5 149 aa16.21■□□□□ 0.19
SNX17-204ENST00000453453 PIK3R6Q5UE93 754 aa16.21■□□□□ 0.19
SNX17-204ENST00000453453 FAM72DQ6L9T8 149 aa16.21■□□□□ 0.19
SNX17-204ENST00000453453 RWDD4Q6NW29 188 aaKnown RBP16.21■□□□□ 0.19
SNX17-204ENST00000453453 TMC5Q6UXY8 1006 aa16.21■□□□□ 0.19
SNX17-204ENST00000453453 TMEM184AQ6ZMB5 413 aa16.21■□□□□ 0.19
SNX17-204ENST00000453453 CHSY1Q86X52 802 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms