RNA–Protein interactions for RNA: ENST00000453310.5

RBM39-219, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,068 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-219ENST00000453310 ZNF354CQ86Y25 554 aa16.04■□□□□ 0.16
RBM39-219ENST00000453310 ARHGAP12Q8IWW6 846 aa16.04■□□□□ 0.16
RBM39-219ENST00000453310 EXD1Q8NHP7 514 aa16.04■□□□□ 0.16
RBM39-219ENST00000453310 MYO19Q96H55 970 aa16.04■□□□□ 0.16
RBM39-219ENST00000453310 RBM41Q96IZ5 413 aaKnown RBP16.04■□□□□ 0.16
RBM39-219ENST00000453310 MRGPRX3Q96LB0 322 aa16.04■□□□□ 0.16
RBM39-219ENST00000453310 RNF157Q96PX1 679 aa16.04■□□□□ 0.16
RBM39-219ENST00000453310 GABRG3Q99928 467 aa16.04■□□□□ 0.16
RBM39-219ENST00000453310 POLR3BQ9NW08 1133 aaPredicted RBP16.04■□□□□ 0.16
RBM39-219ENST00000453310 C2orf42Q9NWW7 574 aa16.04■□□□□ 0.16
RBM39-219ENST00000453310 TRMT1Q9NXH9 659 aaKnown RBP16.04■□□□□ 0.16
RBM39-219ENST00000453310 SLC25A13Q9UJS0 675 aa16.04■□□□□ 0.16
RBM39-219ENST00000453310 PACSIN2Q9UNF0 486 aaPredicted RBP16.04■□□□□ 0.16
RBM39-219ENST00000453310 STON1Q9Y6Q2 735 aa16.04■□□□□ 0.16
RBM39-219ENST00000453310 NUP205Q92621 2012 aa16.03■□□□□ 0.16
RBM39-219ENST00000453310 MIF4GDA9UHW6 222 aaKnown RBP16.03■□□□□ 0.16
RBM39-219ENST00000453310 WASH3PC4AMC7 463 aa16.03■□□□□ 0.16
RBM39-219ENST00000453310 ZMPSTE24O75844 475 aa16.03■□□□□ 0.16
RBM39-219ENST00000453310 HOXB2P14652 356 aa16.03■□□□□ 0.16
RBM39-219ENST00000453310 PRKCHP24723 683 aa16.03■□□□□ 0.16
RBM39-219ENST00000453310 CDKN2BP42772 138 aa16.03■□□□□ 0.16
RBM39-219ENST00000453310 PEX5P50542 639 aa16.03■□□□□ 0.16
RBM39-219ENST00000453310 CCR3P51677 355 aa16.03■□□□□ 0.16
RBM39-219ENST00000453310 RWDD2BP57060 319 aa16.03■□□□□ 0.16
RBM39-219ENST00000453310 ST8SIA6P61647 398 aa16.03■□□□□ 0.16
RBM39-219ENST00000453310 ARF5P84085 180 aa16.03■□□□□ 0.16
RBM39-219ENST00000453310 SATB1Q01826 763 aa16.03■□□□□ 0.16
RBM39-219ENST00000453310 ENPP2Q13822 863 aa16.03■□□□□ 0.16
RBM39-219ENST00000453310 TAZQ16635 292 aa16.03■□□□□ 0.16
RBM39-219ENST00000453310 SPOCD1Q6ZMY3 1216 aa16.03■□□□□ 0.16
RBM39-219ENST00000453310 MAMSTRQ6ZN01 415 aa16.03■□□□□ 0.16
RBM39-219ENST00000453310 CCDC50Q8IVM0 306 aa16.03■□□□□ 0.16
RBM39-219ENST00000453310 RCOR2Q8IZ40 523 aa16.03■□□□□ 0.16
RBM39-219ENST00000453310 PQLC3Q8N755 202 aa16.03■□□□□ 0.16
RBM39-219ENST00000453310 UBL4BQ8N7F7 174 aa16.03■□□□□ 0.16
RBM39-219ENST00000453310 NETO2Q8NC67 525 aa16.03■□□□□ 0.16
RBM39-219ENST00000453310 TRIM58Q8NG06 486 aa16.03■□□□□ 0.16
RBM39-219ENST00000453310 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.03■□□□□ 0.16
RBM39-219ENST00000453310 RPL10LQ96L21 214 aaKnown RBP16.03■□□□□ 0.16
RBM39-219ENST00000453310 SLC39A8Q9C0K1 460 aa16.03■□□□□ 0.16
RBM39-219ENST00000453310 TMEM245Q9H330 911 aa16.03■□□□□ 0.16
RBM39-219ENST00000453310 HPCAL4Q9UM19 191 aa16.03■□□□□ 0.16
RBM39-219ENST00000453310 ZNF318Q5VUA4 2279 aa16.03■□□□□ 0.16
RBM39-219ENST00000453310 NYNRINQ9P2P1 1898 aaKnown RBP16.03■□□□□ 0.16
RBM39-219ENST00000453310 ARHGAP42A6NI28 874 aa16.02■□□□□ 0.16
RBM39-219ENST00000453310 USP27XA6NNY8 438 aa16.02■□□□□ 0.16
RBM39-219ENST00000453310 DFFAO00273 331 aa16.02■□□□□ 0.16
RBM39-219ENST00000453310 DDX3YO15523 660 aaKnown RBP16.02■□□□□ 0.16
RBM39-219ENST00000453310 KDELR3O43731 214 aa16.02■□□□□ 0.16
RBM39-219ENST00000453310 MFSD11O43934 449 aa16.02■□□□□ 0.16
RBM39-219ENST00000453310 HLA-EP13747 358 aa16.02■□□□□ 0.16
RBM39-219ENST00000453310 CXCL12P48061 93 aa16.02■□□□□ 0.16
RBM39-219ENST00000453310 VASPP50552 380 aaPredicted RBP16.02■□□□□ 0.16
RBM39-219ENST00000453310 SERINC3Q13530 473 aa16.02■□□□□ 0.16
RBM39-219ENST00000453310 PAFAH1B3Q15102 231 aaKnown RBP16.02■□□□□ 0.16
RBM39-219ENST00000453310 CRY1Q16526 586 aa16.02■□□□□ 0.16
RBM39-219ENST00000453310 RETSATQ6NUM9 610 aa16.02■□□□□ 0.16
RBM39-219ENST00000453310 LINGO4Q6UY18 593 aa16.02■□□□□ 0.16
RBM39-219ENST00000453310 RFX6Q8HWS3 928 aa16.02■□□□□ 0.16
RBM39-219ENST00000453310 C1orf210Q8IVY1 113 aa16.02■□□□□ 0.16
RBM39-219ENST00000453310 TP53INP2Q8IXH6 220 aa16.02■□□□□ 0.16
RBM39-219ENST00000453310 KDM1BQ8NB78 822 aa16.02■□□□□ 0.16
RBM39-219ENST00000453310 UBE2Q2Q8WVN8 375 aa16.02■□□□□ 0.16
RBM39-219ENST00000453310 ALG3Q92685 438 aa16.02■□□□□ 0.16
RBM39-219ENST00000453310 HES6Q96HZ4 224 aa16.02■□□□□ 0.16
RBM39-219ENST00000453310 MAK16Q9BXY0 300 aaKnown RBP16.02■□□□□ 0.16
RBM39-219ENST00000453310 PRMT8Q9NR22 394 aaPredicted RBP16.02■□□□□ 0.16
RBM39-219ENST00000453310 SLCO3A1Q9UIG8 710 aa16.02■□□□□ 0.16
RBM39-219ENST00000453310 HS3ST2Q9Y278 367 aa16.02■□□□□ 0.16
RBM39-219ENST00000453310 RAD54BQ9Y620 910 aa16.02■□□□□ 0.16
RBM39-219ENST00000453310 CKAP5Q14008 2032 aa16.02■□□□□ 0.15
RBM39-219ENST00000453310 hCG_1818297A0A087WSY0 165 aa16.01■□□□□ 0.15
RBM39-219ENST00000453310 APOL1O14791 398 aa16.01■□□□□ 0.15
RBM39-219ENST00000453310 LAMTOR5O43504 91 aa16.01■□□□□ 0.15
RBM39-219ENST00000453310 PAPSS2O95340 614 aaPredicted RBP16.01■□□□□ 0.15
RBM39-219ENST00000453310 MT-CO1P00395 513 aa16.01■□□□□ 0.15
RBM39-219ENST00000453310 COL9A1P20849 921 aa16.01■□□□□ 0.15
RBM39-219ENST00000453310 NNMTP40261 264 aa16.01■□□□□ 0.15
RBM39-219ENST00000453310 PAPOLAP51003 745 aaKnown RBP16.01■□□□□ 0.15
RBM39-219ENST00000453310 DNA2P51530 1060 aa16.01■□□□□ 0.15
RBM39-219ENST00000453310 COPS2P61201 443 aa16.01■□□□□ 0.15
RBM39-219ENST00000453310 LLGL1Q15334 1064 aa16.01■□□□□ 0.15
RBM39-219ENST00000453310 PPP2R5EQ16537 467 aa16.01■□□□□ 0.15
RBM39-219ENST00000453310 TFDP3Q5H9I0 405 aa16.01■□□□□ 0.15
RBM39-219ENST00000453310 MEI1Q5TIA1 1274 aa16.01■□□□□ 0.15
RBM39-219ENST00000453310 SLC9A4Q6AI14 798 aa16.01■□□□□ 0.15
RBM39-219ENST00000453310 TMEM92Q6UXU6 159 aa16.01■□□□□ 0.15
RBM39-219ENST00000453310 SH2D3CQ8N5H7 860 aa16.01■□□□□ 0.15
RBM39-219ENST00000453310 ZNF366Q8N895 744 aa16.01■□□□□ 0.15
RBM39-219ENST00000453310 ATP11CQ8NB49 1132 aa16.01■□□□□ 0.15
RBM39-219ENST00000453310 PRDM16Q9HAZ2 1276 aa16.01■□□□□ 0.15
RBM39-219ENST00000453310 SLC8A2Q9UPR5 921 aa16.01■□□□□ 0.15
RBM39-219ENST00000453310 CACNA1IQ9P0X4 2223 aa16■□□□□ 0.15
RBM39-219ENST00000453310 CXorf51AA0A1B0GTR3 108 aa16■□□□□ 0.15
RBM39-219ENST00000453310 A0A1W2PQF6 199 aa16■□□□□ 0.15
RBM39-219ENST00000453310 GOLGA6L9A6NEM1 432 aa16■□□□□ 0.15
RBM39-219ENST00000453310 ZSCAN5CA6NGD5 496 aaPredicted RBP16■□□□□ 0.15
RBM39-219ENST00000453310 TTC34A8MYJ7 566 aa16■□□□□ 0.15
RBM39-219ENST00000453310 ATP9BO43861 1147 aa16■□□□□ 0.15
RBM39-219ENST00000453310 SYNCRIPO60506 623 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms