RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 TBC1D3Q8IZP1 549 aaPredicted RBP13.23□□□□□ -0.29
CHD3-206ENST00000452447 HAPLN3Q96S86 360 aa13.23□□□□□ -0.29
CHD3-206ENST00000452447 METTL5Q9NRN9 209 aaKnown RBP13.23□□□□□ -0.29
CHD3-206ENST00000452447 MPP6Q9NZW5 540 aa13.23□□□□□ -0.29
CHD3-206ENST00000452447 TPX2Q9ULW0 747 aaKnown RBP13.23□□□□□ -0.29
CHD3-206ENST00000452447 FARP1Q9Y4F1 1045 aaPredicted RBP13.23□□□□□ -0.29
CHD3-206ENST00000452447 PCDHGB2Q9Y5G2 931 aa13.23□□□□□ -0.29
CHD3-206ENST00000452447 SNX10Q9Y5X0 201 aa13.23□□□□□ -0.29
CHD3-206ENST00000452447 CFAP47Q6ZTR5 3102 aa13.22□□□□□ -0.29
CHD3-206ENST00000452447 DRGXA6NNA5 263 aa13.22□□□□□ -0.29
CHD3-206ENST00000452447 E9PAM4 449 aa13.22□□□□□ -0.29
CHD3-206ENST00000452447 C1QTNF3-AMACRE9PGA6 284 aa13.22□□□□□ -0.29
CHD3-206ENST00000452447 I6L893 689 aaPredicted RBP13.22□□□□□ -0.29
CHD3-206ENST00000452447 MCF2LO15068 1137 aa13.22□□□□□ -0.29
CHD3-206ENST00000452447 EPHB6O15197 1021 aa13.22□□□□□ -0.29
CHD3-206ENST00000452447 ALOX15BO15296 676 aa13.22□□□□□ -0.29
CHD3-206ENST00000452447 FLRT2O43155 660 aa13.22□□□□□ -0.29
CHD3-206ENST00000452447 CYP1A1P04798 512 aaPredicted RBP13.22□□□□□ -0.29
CHD3-206ENST00000452447 MMP8P22894 467 aa13.22□□□□□ -0.29
CHD3-206ENST00000452447 SDC4P31431 198 aa13.22□□□□□ -0.29
CHD3-206ENST00000452447 CCR5P51681 352 aa13.22□□□□□ -0.29
CHD3-206ENST00000452447 ATP11AP98196 1134 aa13.22□□□□□ -0.29
CHD3-206ENST00000452447 FMO1Q01740 532 aa13.22□□□□□ -0.29
CHD3-206ENST00000452447 ARL13BQ3SXY8 428 aa13.22□□□□□ -0.29
CHD3-206ENST00000452447 CCDC183Q5T5S1 534 aa13.22□□□□□ -0.29
CHD3-206ENST00000452447 LAYNQ6UX15 382 aa13.22□□□□□ -0.29
CHD3-206ENST00000452447 Q6ZVU0 165 aa13.22□□□□□ -0.29
CHD3-206ENST00000452447 TFAP2DQ7Z6R9 452 aa13.22□□□□□ -0.29
CHD3-206ENST00000452447 FAM131BQ86XD5 332 aa13.22□□□□□ -0.29
CHD3-206ENST00000452447 ZNF683Q8IZ20 524 aa13.22□□□□□ -0.29
CHD3-206ENST00000452447 SH2D3CQ8N5H7 860 aa13.22□□□□□ -0.29
CHD3-206ENST00000452447 EMC1Q8N766 993 aa13.22□□□□□ -0.29
CHD3-206ENST00000452447 ATP11CQ8NB49 1132 aa13.22□□□□□ -0.29
CHD3-206ENST00000452447 SLC30A5Q8TAD4 765 aa13.22□□□□□ -0.29
CHD3-206ENST00000452447 CCDC114Q96M63 670 aa13.22□□□□□ -0.29
CHD3-206ENST00000452447 SLC6A18Q96N87 628 aa13.22□□□□□ -0.29
CHD3-206ENST00000452447 C11orf70Q9BRQ4 267 aa13.22□□□□□ -0.29
CHD3-206ENST00000452447 ORAI3Q9BRQ5 295 aa13.22□□□□□ -0.29
CHD3-206ENST00000452447 AASDHPPTQ9NRN7 309 aa13.22□□□□□ -0.29
CHD3-206ENST00000452447 TMPRSS4Q9NRS4 437 aa13.22□□□□□ -0.29
CHD3-206ENST00000452447 LIMA1Q9UHB6 759 aaKnown RBP13.22□□□□□ -0.29
CHD3-206ENST00000452447 PCOLCE2Q9UKZ9 415 aa13.22□□□□□ -0.29
CHD3-206ENST00000452447 HS3ST2Q9Y278 367 aa13.22□□□□□ -0.29
CHD3-206ENST00000452447 SIK3Q9Y2K2 1263 aa13.22□□□□□ -0.29
CHD3-206ENST00000452447 A0A0D9SEW6 157 aa13.21□□□□□ -0.29
CHD3-206ENST00000452447 LGALS16A8MUM7 142 aa13.21□□□□□ -0.29
CHD3-206ENST00000452447 C1QTNF9BB2RNN3 333 aa13.21□□□□□ -0.29
CHD3-206ENST00000452447 KCNK3O14649 394 aa13.21□□□□□ -0.29
CHD3-206ENST00000452447 VILLO15195 856 aa13.21□□□□□ -0.29
CHD3-206ENST00000452447 DFNA5O60443 496 aa13.21□□□□□ -0.29
CHD3-206ENST00000452447 PROS1P07225 676 aa13.21□□□□□ -0.29
CHD3-206ENST00000452447 C1QTNF9P0C862 333 aa13.21□□□□□ -0.29
CHD3-206ENST00000452447 SRCP12931 536 aa13.21□□□□□ -0.29
CHD3-206ENST00000452447 CHRNB2P17787 502 aa13.21□□□□□ -0.29
CHD3-206ENST00000452447 DRD3P35462 400 aa13.21□□□□□ -0.29
CHD3-206ENST00000452447 NSFP46459 744 aaKnown RBP13.21□□□□□ -0.29
CHD3-206ENST00000452447 CDO1Q16878 200 aa13.21□□□□□ -0.29
CHD3-206ENST00000452447 TRNP1Q6NT89 227 aa13.21□□□□□ -0.29
CHD3-206ENST00000452447 PHLDB2Q86SQ0 1253 aa13.21□□□□□ -0.29
CHD3-206ENST00000452447 CHCHD4Q8N4Q1 142 aa13.21□□□□□ -0.29
CHD3-206ENST00000452447 RHBDD1Q8TEB9 315 aa13.21□□□□□ -0.29
CHD3-206ENST00000452447 ZYG11BQ9C0D3 744 aa13.21□□□□□ -0.29
CHD3-206ENST00000452447 KDM4CQ9H3R0 1056 aa13.21□□□□□ -0.29
CHD3-206ENST00000452447 VPS51Q9UID3 782 aa13.21□□□□□ -0.29
CHD3-206ENST00000452447 SARDHQ9UL12 918 aa13.21□□□□□ -0.29
CHD3-206ENST00000452447 PPM1HQ9ULR3 514 aa13.21□□□□□ -0.29
CHD3-206ENST00000452447 APOBEC2Q9Y235 224 aaKnown RBP13.21□□□□□ -0.29
CHD3-206ENST00000452447 NEUROG3Q9Y4Z2 214 aa13.21□□□□□ -0.29
CHD3-206ENST00000452447 IGLV3-10A0A075B6K4 115 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 SLC7A4O43246 635 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 SNAP91O60641 907 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 CBFA2T3O75081 653 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 MT-CO1P00395 513 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 FTH1P19P0C7X4 201 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 CD38P28907 300 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 CTSKP43235 329 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 CCT8P50990 548 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 CLCN6P51797 869 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 CCDC15Q0P6D6 951 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 POM121L1PQ3SYA9 428 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 SLC45A4Q5BKX6 768 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 DBX2Q6ZNG2 339 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 BNIPLQ7Z465 357 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 PRPF39Q86UA1 669 aaKnown RBP13.2□□□□□ -0.3
CHD3-206ENST00000452447 PNPLA1Q8N8W4 532 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 DCAF4L2Q8NA75 395 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 PIP4K2CQ8TBX8 421 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 RXFP2Q8WXD0 754 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 SERAC1Q96JX3 654 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 PSMB7Q99436 277 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 CDC6Q99741 560 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 SPON2Q9BUD6 331 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 NAT10Q9H0A0 1025 aaKnown RBP13.2□□□□□ -0.3
CHD3-206ENST00000452447 EBF2Q9HAK2 575 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 SEPT11Q9NVA2 429 aaKnown RBP13.2□□□□□ -0.3
CHD3-206ENST00000452447 ADAM22Q9P0K1 906 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 ACACAQ13085 2346 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 TRPM6Q9BX84 2022 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 ILVBLA1L0T0 632 aa13.2□□□□□ -0.3
CHD3-206ENST00000452447 LRRC10BA6NIK2 292 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms