RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 HSPH1Q92598 858 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 ARHGEF2Q92974 986 aaKnown RBP9.09□□□□□ -0.95
COL8A1-203ENST00000452013 MYO19Q96H55 970 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 LOXL4Q96JB6 756 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 ZC3H10Q96K80 434 aaKnown RBP9.09□□□□□ -0.95
COL8A1-203ENST00000452013 PEBP4Q96S96 227 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 PSMB7Q99436 277 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 ACE2Q9BYF1 805 aaPredicted RBP9.09□□□□□ -0.95
COL8A1-203ENST00000452013 CD248Q9HCU0 757 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 ITM2CQ9NQX7 267 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 GPATCH2LQ9NWQ4 482 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 ZNF212Q9UDV6 495 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 SCML1Q9UN30 329 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 NCKAP1Q9Y2A7 1128 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 DENND4CQ5VZ89 1909 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 TICRRQ7Z2Z1 1910 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 A0A0A6YYK5 440 aaPredicted RBP9.08□□□□□ -0.96
COL8A1-203ENST00000452013 ZSCAN5CA6NGD5 496 aaPredicted RBP9.08□□□□□ -0.96
COL8A1-203ENST00000452013 SOWAHDA6NJG2 315 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 TMEM110-MUSTN1A8MSY1 372 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 CTIFO43310 598 aaKnown RBP9.08□□□□□ -0.96
COL8A1-203ENST00000452013 SNAP91O60641 907 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 SIN3BO75182 1162 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 GOT1P17174 413 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 ERCC2P18074 760 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 IL1R2P27930 398 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 RECQLP46063 649 aaPredicted RBP9.08□□□□□ -0.96
COL8A1-203ENST00000452013 COPAP53621 1224 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 HADHBP55084 474 aaKnown RBP9.08□□□□□ -0.96
COL8A1-203ENST00000452013 RPS14P62263 151 aaKnown RBP9.08□□□□□ -0.96
COL8A1-203ENST00000452013 SRSF5Q13243 272 aaKnown RBP9.08□□□□□ -0.96
COL8A1-203ENST00000452013 PDK2Q15119 407 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 MAP7D1Q3KQU3 841 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 PARP15Q460N3 678 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 ODF2Q5BJF6 829 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 SPDYCQ5MJ68 293 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 ZFYVE27Q5T4F4 411 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 C9orf64Q5T6V5 341 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 FAM46CQ5VWP2 391 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 ZNF776Q68DI1 518 aaPredicted RBP9.08□□□□□ -0.96
COL8A1-203ENST00000452013 LAIR1Q6GTX8 287 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 LPCAT2Q7L5N7 544 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 DSG4Q86SJ6 1040 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 LRRC8AQ8IWT6 810 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 UMODL1-AS1Q8N2C9 162 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 SH2D3CQ8N5H7 860 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 ZNF366Q8N895 744 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 SUMF1Q8NBK3 374 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 KCTD6Q8NC69 237 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 CCDC112Q8NEF3 446 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 CASKIN2Q8WXE0 1202 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 PTPRN2Q92932 1015 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 ERLEC1Q96DZ1 483 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 KCTD15Q96SI1 283 aaPredicted RBP9.08□□□□□ -0.96
COL8A1-203ENST00000452013 PHOX2BQ99453 314 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 CEP44Q9C0F1 390 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 MKRN2Q9H000 416 aaKnown RBP9.08□□□□□ -0.96
COL8A1-203ENST00000452013 RSPH9Q9H1X1 276 aaPredicted RBP9.08□□□□□ -0.96
COL8A1-203ENST00000452013 KCNF1Q9H3M0 494 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 OSGEPQ9NPF4 335 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.08□□□□□ -0.96
COL8A1-203ENST00000452013 CWC15Q9P013 229 aaKnown RBP9.08□□□□□ -0.96
COL8A1-203ENST00000452013 RCOR3Q9P2K3 495 aaPredicted RBP9.08□□□□□ -0.96
COL8A1-203ENST00000452013 NCDNQ9UBB6 729 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 VPS51Q9UID3 782 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 GMEB2Q9UKD1 530 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 SMG5Q9UPR3 1016 aaKnown RBP9.08□□□□□ -0.96
COL8A1-203ENST00000452013 HS3ST2Q9Y278 367 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 INVSQ9Y283 1065 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 CUL9Q8IWT3 2517 aa9.08□□□□□ -0.96
COL8A1-203ENST00000452013 ZNF638Q14966 1978 aaKnown RBP9.08□□□□□ -0.96
COL8A1-203ENST00000452013 NCOR1O75376 2440 aa9.07□□□□□ -0.96
COL8A1-203ENST00000452013 KIF26AQ9ULI4 1882 aaPredicted RBP9.07□□□□□ -0.96
COL8A1-203ENST00000452013 PRR23AA6NEV1 266 aa9.07□□□□□ -0.96
COL8A1-203ENST00000452013 ARHGAP42A6NI28 874 aa9.07□□□□□ -0.96
COL8A1-203ENST00000452013 RASA4BC9J798 803 aa9.07□□□□□ -0.96
COL8A1-203ENST00000452013 MCF2LO15068 1137 aa9.07□□□□□ -0.96
COL8A1-203ENST00000452013 DCLK1O15075 740 aa9.07□□□□□ -0.96
COL8A1-203ENST00000452013 ALOX15BO15296 676 aa9.07□□□□□ -0.96
COL8A1-203ENST00000452013 RASA4O43374 803 aa9.07□□□□□ -0.96
COL8A1-203ENST00000452013 BUB1O43683 1085 aa9.07□□□□□ -0.96
COL8A1-203ENST00000452013 GFRA3O60609 400 aa9.07□□□□□ -0.96
COL8A1-203ENST00000452013 NDUFS2O75306 463 aa9.07□□□□□ -0.96
COL8A1-203ENST00000452013 ZMPSTE24O75844 475 aa9.07□□□□□ -0.96
COL8A1-203ENST00000452013 MT-CO1P00395 513 aa9.07□□□□□ -0.96
COL8A1-203ENST00000452013 RETP07949 1114 aa9.07□□□□□ -0.96
COL8A1-203ENST00000452013 C7P10643 843 aa9.07□□□□□ -0.96
COL8A1-203ENST00000452013 SRCP12931 536 aa9.07□□□□□ -0.96
COL8A1-203ENST00000452013 CD6P30203 668 aa9.07□□□□□ -0.96
COL8A1-203ENST00000452013 SLC8A1P32418 973 aa9.07□□□□□ -0.96
COL8A1-203ENST00000452013 ACVRL1P37023 503 aa9.07□□□□□ -0.96
COL8A1-203ENST00000452013 NUMBP49757 651 aa9.07□□□□□ -0.96
COL8A1-203ENST00000452013 STK19P49842 368 aaPredicted RBP9.07□□□□□ -0.96
COL8A1-203ENST00000452013 NAP1L1P55209 391 aaKnown RBP9.07□□□□□ -0.96
COL8A1-203ENST00000452013 CDH6P55285 790 aa9.07□□□□□ -0.96
COL8A1-203ENST00000452013 SLC25A11Q02978 314 aaKnown RBP9.07□□□□□ -0.96
COL8A1-203ENST00000452013 CCDC15Q0P6D6 951 aa9.07□□□□□ -0.96
COL8A1-203ENST00000452013 ELAVL3Q14576 367 aaKnown RBP9.07□□□□□ -0.96
COL8A1-203ENST00000452013 IFI16Q16666 785 aaKnown RBP9.07□□□□□ -0.96
COL8A1-203ENST00000452013 SMTNL2Q2TAL5 461 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms