RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 HINFPQ9BQA5 517 aa13.02□□□□□ -0.33
HLA-DRB9-201ENST00000449413 FERMT1Q9BQL6 677 aa13.02□□□□□ -0.33
HLA-DRB9-201ENST00000449413 SLC39A8Q9C0K1 460 aa13.02□□□□□ -0.33
HLA-DRB9-201ENST00000449413 USP29Q9HBJ7 922 aa13.02□□□□□ -0.33
HLA-DRB9-201ENST00000449413 GRHL1Q9NZI5 618 aa13.02□□□□□ -0.33
HLA-DRB9-201ENST00000449413 EP300Q09472 2414 aaPredicted RBP13.01□□□□□ -0.33
HLA-DRB9-201ENST00000449413 ARHGAP42A6NI28 874 aa13.01□□□□□ -0.33
HLA-DRB9-201ENST00000449413 RASA4BC9J798 803 aa13.01□□□□□ -0.33
HLA-DRB9-201ENST00000449413 RNF103O00237 685 aa13.01□□□□□ -0.33
HLA-DRB9-201ENST00000449413 RASA4O43374 803 aa13.01□□□□□ -0.33
HLA-DRB9-201ENST00000449413 TBL1XO60907 577 aa13.01□□□□□ -0.33
HLA-DRB9-201ENST00000449413 STK10O94804 968 aaKnown RBP13.01□□□□□ -0.33
HLA-DRB9-201ENST00000449413 SEC31AO94979 1220 aaKnown RBP13.01□□□□□ -0.33
HLA-DRB9-201ENST00000449413 LUC7L3O95232 432 aaKnown RBP13.01□□□□□ -0.33
HLA-DRB9-201ENST00000449413 RHOCP08134 193 aa13.01□□□□□ -0.33
HLA-DRB9-201ENST00000449413 ZSCAN5DPP0CG00 497 aa13.01□□□□□ -0.33
HLA-DRB9-201ENST00000449413 MYBL2P10244 700 aa13.01□□□□□ -0.33
HLA-DRB9-201ENST00000449413 ECHS1P30084 290 aa13.01□□□□□ -0.33
HLA-DRB9-201ENST00000449413 OR1E1P30953 314 aa13.01□□□□□ -0.33
HLA-DRB9-201ENST00000449413 STIP1P31948 543 aaKnown RBP13.01□□□□□ -0.33
HLA-DRB9-201ENST00000449413 CLCN6P51797 869 aa13.01□□□□□ -0.33
HLA-DRB9-201ENST00000449413 NRLP54845 237 aa13.01□□□□□ -0.33
HLA-DRB9-201ENST00000449413 MPPE1Q53F39 396 aa13.01□□□□□ -0.33
HLA-DRB9-201ENST00000449413 C6orf118Q5T5N4 469 aa13.01□□□□□ -0.33
HLA-DRB9-201ENST00000449413 ARHGAP36Q6ZRI8 547 aa13.01□□□□□ -0.33
HLA-DRB9-201ENST00000449413 P2RY11Q96G91 374 aa13.01□□□□□ -0.33
HLA-DRB9-201ENST00000449413 RIPOR3Q96MK2 946 aa13.01□□□□□ -0.33
HLA-DRB9-201ENST00000449413 ASB16Q96NS5 453 aa13.01□□□□□ -0.33
HLA-DRB9-201ENST00000449413 PHF7Q9BWX1 381 aaPredicted RBP13.01□□□□□ -0.33
HLA-DRB9-201ENST00000449413 FAM129AQ9BZQ8 928 aa13.01□□□□□ -0.33
HLA-DRB9-201ENST00000449413 S1PR5Q9H228 398 aa13.01□□□□□ -0.33
HLA-DRB9-201ENST00000449413 ARGLU1Q9NWB6 273 aaPredicted RBP13.01□□□□□ -0.33
HLA-DRB9-201ENST00000449413 GDE1Q9NZC3 331 aa13.01□□□□□ -0.33
HLA-DRB9-201ENST00000449413 SEPT10Q9P0V9 454 aa13.01□□□□□ -0.33
HLA-DRB9-201ENST00000449413 WHRNQ9P202 907 aa13.01□□□□□ -0.33
HLA-DRB9-201ENST00000449413 PAK5Q9P286 719 aa13.01□□□□□ -0.33
HLA-DRB9-201ENST00000449413 SNX24Q9Y343 169 aa13.01□□□□□ -0.33
HLA-DRB9-201ENST00000449413 MIA3Q5JRA6 1907 aa13.01□□□□□ -0.33
HLA-DRB9-201ENST00000449413 DNAH14Q0VDD8 3507 aa13.01□□□□□ -0.33
HLA-DRB9-201ENST00000449413 COL4A2P08572 1712 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 A0A0A0MRY4 1105 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 CCDC151A5D8V7 595 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 DNALI1O14645 258 aaPredicted RBP13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 NDC80O14777 642 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 MTSS1O43312 755 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 H2AFXP16104 143 aaPredicted RBP13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 FCARP24071 287 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 IVDP26440 423 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 HOXD9P28356 352 aaPredicted RBP13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 RPL22P35268 128 aaKnown RBP13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 ACTN2P35609 894 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 MTHFRP42898 656 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 CARSP49589 748 aaKnown RBP13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 PAPOLAP51003 745 aaKnown RBP13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 DRG2P55039 364 aaKnown RBP13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 YBEYP58557 167 aaPredicted RBP13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 GPS1Q13098 491 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 CALCOCO2Q13137 446 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 CDH18Q13634 790 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 HLTFQ14527 1009 aaKnown RBP eCLIP13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 POLD3Q15054 466 aaPredicted RBP13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 BRD3Q15059 726 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 TRADDQ15628 312 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 FAM78AQ5JUQ0 283 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 ATAT1Q5SQI0 421 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 IZUMO3Q5VZ72 239 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 RNF43Q68DV7 783 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 CXorf57Q6NSI4 855 aaKnown RBP13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 TIGD7Q6NT04 549 aaPredicted RBP13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 FBXO38Q6PIJ6 1188 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 SETD3Q86TU7 594 aaPredicted RBP13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 LRRC49Q8IUZ0 686 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 CARNMT1Q8N4J0 409 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 KIAA1958Q8N8K9 716 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 EIF1ADQ8N9N8 165 aaKnown RBP13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 ANKRD7Q92527 254 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 SMARCD2Q92925 531 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 OTUB2Q96DC9 234 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 RSPRY1Q96DX4 576 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 SPATA13Q96N96 652 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 TSGA13Q96PP4 275 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 NEUROG2Q9H2A3 272 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 SP110Q9HB58 689 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 TRPV4Q9HBA0 871 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 TBC1D14Q9P2M4 693 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 CDH7Q9ULB5 785 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 NFU1Q9UMS0 254 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 WNT6Q9Y6F9 365 aa13□□□□□ -0.33
HLA-DRB9-201ENST00000449413 MUC22E2RYF6 1773 aaPredicted RBP12.99□□□□□ -0.33
HLA-DRB9-201ENST00000449413 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.99□□□□□ -0.33
HLA-DRB9-201ENST00000449413 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.99□□□□□ -0.33
HLA-DRB9-201ENST00000449413 ILVBLA1L0T0 632 aa12.99□□□□□ -0.33
HLA-DRB9-201ENST00000449413 C5orf60A6NFR6 353 aa12.99□□□□□ -0.33
HLA-DRB9-201ENST00000449413 KCNK1O00180 336 aa12.99□□□□□ -0.33
HLA-DRB9-201ENST00000449413 SLC9A3R1O14745 358 aaPredicted RBP12.99□□□□□ -0.33
HLA-DRB9-201ENST00000449413 MAFKO60675 156 aa12.99□□□□□ -0.33
HLA-DRB9-201ENST00000449413 OPHN1O60890 802 aa12.99□□□□□ -0.33
HLA-DRB9-201ENST00000449413 ERLIN1O75477 346 aa12.99□□□□□ -0.33
HLA-DRB9-201ENST00000449413 GCATO75600 419 aa12.99□□□□□ -0.33
HLA-DRB9-201ENST00000449413 CYBBP04839 570 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms