RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 TEDDM1Q5T9Z0 273 aa15.1■□□□□ 0.01
SF1-211ENST00000448404 BTBD8Q5XKL5 378 aa15.1■□□□□ 0.01
SF1-211ENST00000448404 BZW1Q7L1Q6 419 aaKnown RBP15.1■□□□□ 0.01
SF1-211ENST00000448404 SPATA2LQ8IUW3 424 aaPredicted RBP15.1■□□□□ 0.01
SF1-211ENST00000448404 ARHGAP12Q8IWW6 846 aa15.1■□□□□ 0.01
SF1-211ENST00000448404 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.1■□□□□ 0.015e-7■■■■■ 28.5
SF1-211ENST00000448404 KLHDC9Q8NEP7 349 aa15.1■□□□□ 0.01
SF1-211ENST00000448404 PKMYT1Q99640 499 aa15.1■□□□□ 0.01
SF1-211ENST00000448404 CSNK1G1Q9HCP0 422 aa15.1■□□□□ 0.01
SF1-211ENST00000448404 BFARQ9NZS9 450 aa15.1■□□□□ 0.01
SF1-211ENST00000448404 ACTL7AQ9Y615 435 aa15.1■□□□□ 0.01
SF1-211ENST00000448404 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.09■□□□□ 0.01
SF1-211ENST00000448404 TK2O00142 265 aa15.09■□□□□ 0.01
SF1-211ENST00000448404 BUD23O43709 281 aaKnown RBP15.09■□□□□ 0.01
SF1-211ENST00000448404 CNTN5O94779 1100 aa15.09■□□□□ 0.01
SF1-211ENST00000448404 ESRRAP11474 423 aaPredicted RBP15.09■□□□□ 0.01
SF1-211ENST00000448404 YWHAHQ04917 246 aaPredicted RBP15.09■□□□□ 0.01
SF1-211ENST00000448404 GALNT2Q10471 571 aa15.09■□□□□ 0.01
SF1-211ENST00000448404 TUSC3Q13454 348 aa15.09■□□□□ 0.01
SF1-211ENST00000448404 KPNB1Q14974 876 aaKnown RBP15.09■□□□□ 0.01
SF1-211ENST00000448404 KCTD11Q693B1 232 aa15.09■□□□□ 0.01
SF1-211ENST00000448404 ESRP1Q6NXG1 681 aaKnown RBP15.09■□□□□ 0.01
SF1-211ENST00000448404 LDB1Q86U70 411 aaPredicted RBP15.09■□□□□ 0.01
SF1-211ENST00000448404 METTL23Q86XA0 190 aa15.09■□□□□ 0.01
SF1-211ENST00000448404 CDKL2Q92772 493 aa15.09■□□□□ 0.01
SF1-211ENST00000448404 NTAN1Q96AB6 310 aa15.09■□□□□ 0.01
SF1-211ENST00000448404 SGF29Q96ES7 293 aa15.09■□□□□ 0.01
SF1-211ENST00000448404 MYEOVQ96EZ4 313 aa15.09■□□□□ 0.01
SF1-211ENST00000448404 NUDCD1Q96RS6 583 aa15.09■□□□□ 0.01
SF1-211ENST00000448404 FICDQ9BVA6 458 aa15.09■□□□□ 0.01
SF1-211ENST00000448404 GBA3Q9H227 469 aa15.09■□□□□ 0.01
SF1-211ENST00000448404 GYG2O15488 501 aa15.09■□□□□ 0.01
SF1-211ENST00000448404 CALRP27797 417 aaKnown RBP15.09■□□□□ 0.01
SF1-211ENST00000448404 GABRB3P28472 473 aa15.09■□□□□ 0.01
SF1-211ENST00000448404 TUBP50607 506 aa15.09■□□□□ 0.01
SF1-211ENST00000448404 IRX1P78414 480 aaPredicted RBP15.09■□□□□ 0.01
SF1-211ENST00000448404 RPS27LQ71UM5 84 aaKnown RBP15.09■□□□□ 0.01
SF1-211ENST00000448404 KCNMB4Q86W47 210 aa15.09■□□□□ 0.01
SF1-211ENST00000448404 ZNF354CQ86Y25 554 aa15.09■□□□□ 0.01
SF1-211ENST00000448404 SMC1BQ8NDV3 1235 aa15.09■□□□□ 0.01
SF1-211ENST00000448404 ZNF483Q8TF39 744 aaPredicted RBP15.09■□□□□ 0.01
SF1-211ENST00000448404 TEKT5Q96M29 485 aa15.09■□□□□ 0.01
SF1-211ENST00000448404 ACBD6Q9BR61 282 aa15.09■□□□□ 0.01
SF1-211ENST00000448404 PTCH2Q9Y6C5 1203 aa15.09■□□□□ 0.01
SF1-211ENST00000448404 B2RBV5 119 aa15.08■□□□□ 0.01
SF1-211ENST00000448404 VAPBO95292 243 aa15.08■□□□□ 0.01
SF1-211ENST00000448404 PTPN4P29074 926 aa15.08■□□□□ 0.01
SF1-211ENST00000448404 SLC1A6P48664 564 aa15.08■□□□□ 0.01
SF1-211ENST00000448404 SCAPQ12770 1279 aa15.08■□□□□ 0.01
SF1-211ENST00000448404 SEPT6Q14141 434 aa15.08■□□□□ 0.01
SF1-211ENST00000448404 DSC3Q14574 896 aa15.08■□□□□ 0.01
SF1-211ENST00000448404 IHHQ14623 411 aa15.08■□□□□ 0.01
SF1-211ENST00000448404 GRM3Q14832 879 aa15.08■□□□□ 0.01
SF1-211ENST00000448404 CRLF3Q8IUI8 442 aa15.08■□□□□ 0.01
SF1-211ENST00000448404 FAM136AQ96C01 138 aa15.08■□□□□ 0.01
SF1-211ENST00000448404 NSL1Q96IY1 281 aa15.08■□□□□ 0.01
SF1-211ENST00000448404 OMDQ99983 421 aa15.08■□□□□ 0.01
SF1-211ENST00000448404 OSBPL1AQ9BXW6 950 aa15.08■□□□□ 0.01
SF1-211ENST00000448404 CRISPLD1Q9H336 500 aa15.08■□□□□ 0.01
SF1-211ENST00000448404 RANBP2P49792 3224 aaKnown RBP15.08■□□□□ 0
SF1-211ENST00000448404 A0A096LPK6 155 aa15.08■□□□□ 0
SF1-211ENST00000448404 GOLGA8QA0A0J9YX86 632 aa15.08■□□□□ 0
SF1-211ENST00000448404 LOC100653049A0A140TA62 436 aa15.08■□□□□ 0
SF1-211ENST00000448404 GOLGA8OA6NCC3 632 aa15.08■□□□□ 0
SF1-211ENST00000448404 GOLGA8NF8WBI6 632 aa15.08■□□□□ 0
SF1-211ENST00000448404 IRAK2O43187 625 aa15.08■□□□□ 0
SF1-211ENST00000448404 KRT34O76011 436 aa15.08■□□□□ 0
SF1-211ENST00000448404 KRT36O76013 467 aa15.08■□□□□ 0
SF1-211ENST00000448404 HLA-DQB2P05538 268 aa15.08■□□□□ 0
SF1-211ENST00000448404 CHRNGP07510 517 aa15.08■□□□□ 0
SF1-211ENST00000448404 FCGRTP55899 365 aa15.08■□□□□ 0
SF1-211ENST00000448404 PM20D1Q6GTS8 502 aa15.08■□□□□ 0
SF1-211ENST00000448404 MRPL10Q7Z7H8 261 aaKnown RBP15.08■□□□□ 0
SF1-211ENST00000448404 TET1Q8NFU7 2136 aa15.08■□□□□ 0
SF1-211ENST00000448404 SORT1Q99523 831 aa15.08■□□□□ 0
SF1-211ENST00000448404 ENO4A6NNW6 628 aa15.07■□□□□ 0
SF1-211ENST00000448404 J3KR12 359 aa15.07■□□□□ 0
SF1-211ENST00000448404 GSC2O15499 205 aa15.07■□□□□ 0
SF1-211ENST00000448404 SNNO75324 88 aaPredicted RBP15.07■□□□□ 0
SF1-211ENST00000448404 PROCP04070 461 aa15.07■□□□□ 0
SF1-211ENST00000448404 MLNP12872 115 aa15.07■□□□□ 0
SF1-211ENST00000448404 ETFBP38117 255 aa15.07■□□□□ 0
SF1-211ENST00000448404 GP5P40197 560 aa15.07■□□□□ 0
SF1-211ENST00000448404 INHBEP58166 350 aa15.07■□□□□ 0
SF1-211ENST00000448404 EFEMP1Q12805 493 aa15.07■□□□□ 0
SF1-211ENST00000448404 GRIK3Q13003 919 aa15.07■□□□□ 0
SF1-211ENST00000448404 PSMD5Q16401 504 aa15.07■□□□□ 0
SF1-211ENST00000448404 ALFQ53S48 1182 aa15.07■□□□□ 0
SF1-211ENST00000448404 ZNF789Q5FWF6 425 aa15.07■□□□□ 0
SF1-211ENST00000448404 ARTNQ5T4W7 220 aa15.07■□□□□ 0
SF1-211ENST00000448404 RAPH1Q70E73 1250 aa15.07■□□□□ 0
SF1-211ENST00000448404 MFSD6LQ8IWD5 586 aa15.07■□□□□ 0
SF1-211ENST00000448404 ATPAF2Q8N5M1 289 aa15.07■□□□□ 0
SF1-211ENST00000448404 RBM15BQ8NDT2 890 aaKnown RBP15.07■□□□□ 0
SF1-211ENST00000448404 MTBPQ96DY7 904 aa15.07■□□□□ 0
SF1-211ENST00000448404 LRRC40Q9H9A6 602 aa15.07■□□□□ 0
SF1-211ENST00000448404 CASS4Q9NQ75 786 aa15.07■□□□□ 0
SF1-211ENST00000448404 CHST12Q9NRB3 414 aa15.07■□□□□ 0
SF1-211ENST00000448404 HS3ST4Q9Y661 456 aa15.07■□□□□ 0
SF1-211ENST00000448404 C2P06681 752 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms