RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 MZF1P28698 734 aaPredicted RBP19.96■□□□□ 0.79
SGCE-207ENST00000447873 NUMBP49757 651 aa19.96■□□□□ 0.79
SGCE-207ENST00000447873 TFF2Q03403 129 aa19.96■□□□□ 0.79
SGCE-207ENST00000447873 LMAN2Q12907 356 aa19.96■□□□□ 0.79
SGCE-207ENST00000447873 TRIP13Q15645 432 aaPredicted RBP19.96■□□□□ 0.79
SGCE-207ENST00000447873 TRIM51Q9BSJ1 452 aa19.96■□□□□ 0.79
SGCE-207ENST00000447873 SLC2A11Q9BYW1 496 aa19.96■□□□□ 0.79
SGCE-207ENST00000447873 BRD9Q9H8M2 597 aa19.96■□□□□ 0.79
SGCE-207ENST00000447873 LIMD1Q9UGP4 676 aa19.96■□□□□ 0.79
SGCE-207ENST00000447873 VPS28Q9UK41 221 aa19.96■□□□□ 0.79
SGCE-207ENST00000447873 OTOL1A6NHN0 477 aaPredicted RBP19.95■□□□□ 0.78
SGCE-207ENST00000447873 CACNG3O60359 315 aa19.95■□□□□ 0.78
SGCE-207ENST00000447873 KRT14P02533 472 aa19.95■□□□□ 0.78
SGCE-207ENST00000447873 HLA-FP30511 346 aa19.95■□□□□ 0.78
SGCE-207ENST00000447873 CD70P32970 193 aa19.95■□□□□ 0.78
SGCE-207ENST00000447873 ACTN2P35609 894 aa19.95■□□□□ 0.78
SGCE-207ENST00000447873 CLCN6P51797 869 aa19.95■□□□□ 0.78
SGCE-207ENST00000447873 SLC7A5Q01650 507 aa19.95■□□□□ 0.78
SGCE-207ENST00000447873 IL10RBQ08334 325 aa19.95■□□□□ 0.78
SGCE-207ENST00000447873 SLC12A1Q13621 1099 aa19.95■□□□□ 0.78
SGCE-207ENST00000447873 NXPE3Q969Y0 559 aa19.95■□□□□ 0.78
SGCE-207ENST00000447873 ACE2Q9BYF1 805 aaPredicted RBP19.95■□□□□ 0.78
SGCE-207ENST00000447873 ABCB8Q9NUT2 735 aa19.95■□□□□ 0.78
SGCE-207ENST00000447873 GTSE1Q9NYZ3 720 aa19.95■□□□□ 0.78
SGCE-207ENST00000447873 UTP11Q9Y3A2 253 aaKnown RBP19.95■□□□□ 0.78
SGCE-207ENST00000447873 J3KR12 359 aa19.95■□□□□ 0.78
SGCE-207ENST00000447873 RNF103O00237 685 aa19.95■□□□□ 0.78
SGCE-207ENST00000447873 CBX4O00257 560 aa19.95■□□□□ 0.78
SGCE-207ENST00000447873 MATN3O15232 486 aa19.95■□□□□ 0.78
SGCE-207ENST00000447873 KDELR3O43731 214 aa19.95■□□□□ 0.78
SGCE-207ENST00000447873 HEXIM1O94992 359 aaKnown RBP19.95■□□□□ 0.78
SGCE-207ENST00000447873 ETS1P14921 441 aa19.95■□□□□ 0.78
SGCE-207ENST00000447873 AAK1Q2M2I8 961 aa19.95■□□□□ 0.78
SGCE-207ENST00000447873 ERCC6LQ2NKX8 1250 aa19.95■□□□□ 0.78
SGCE-207ENST00000447873 PRUNE1Q86TP1 453 aa19.95■□□□□ 0.78
SGCE-207ENST00000447873 GLIS1Q8NBF1 620 aa19.95■□□□□ 0.78
SGCE-207ENST00000447873 MYRIPQ8NFW9 859 aa19.95■□□□□ 0.78
SGCE-207ENST00000447873 TTC8Q8TAM2 541 aa19.95■□□□□ 0.78
SGCE-207ENST00000447873 NSMCE1Q8WV22 266 aa19.95■□□□□ 0.78
SGCE-207ENST00000447873 RTP4Q96DX8 246 aa19.95■□□□□ 0.78
SGCE-207ENST00000447873 RAB17Q9H0T7 212 aa19.95■□□□□ 0.78
SGCE-207ENST00000447873 KCNK12Q9HB15 430 aa19.95■□□□□ 0.78
SGCE-207ENST00000447873 DNAJC17Q9NVM6 304 aaKnown RBP19.95■□□□□ 0.78
SGCE-207ENST00000447873 NEU2Q9Y3R4 380 aa19.95■□□□□ 0.78
SGCE-207ENST00000447873 OR51B4Q9Y5P0 310 aa19.95■□□□□ 0.78
SGCE-207ENST00000447873 PRAMEF11O60813 436 aa19.94■□□□□ 0.78
SGCE-207ENST00000447873 ZSCAN5DPP0CG00 497 aa19.94■□□□□ 0.78
SGCE-207ENST00000447873 CCNB1P14635 433 aa19.94■□□□□ 0.78
SGCE-207ENST00000447873 NRLP54845 237 aa19.94■□□□□ 0.78
SGCE-207ENST00000447873 PTK6Q13882 451 aa19.94■□□□□ 0.78
SGCE-207ENST00000447873 P3H1Q32P28 736 aa19.94■□□□□ 0.78
SGCE-207ENST00000447873 APCDD1Q8J025 514 aa19.94■□□□□ 0.78
SGCE-207ENST00000447873 CCHCR1Q8TD31 782 aa19.94■□□□□ 0.78
SGCE-207ENST00000447873 ALG14Q96F25 216 aa19.94■□□□□ 0.78
SGCE-207ENST00000447873 C2orf49Q9BVC5 232 aaPredicted RBP19.94■□□□□ 0.78
SGCE-207ENST00000447873 PCDH9Q9HC56 1237 aa19.94■□□□□ 0.78
SGCE-207ENST00000447873 PRDM6Q9NQX0 595 aa19.94■□□□□ 0.78
SGCE-207ENST00000447873 IGSF9Q9P2J2 1179 aa19.94■□□□□ 0.78
SGCE-207ENST00000447873 ASIC3Q9UHC3 531 aa19.94■□□□□ 0.78
SGCE-207ENST00000447873 GGA2Q9UJY4 613 aa19.94■□□□□ 0.78
SGCE-207ENST00000447873 C5orf60A6NFR6 353 aa19.93■□□□□ 0.78
SGCE-207ENST00000447873 GCATO75600 419 aa19.93■□□□□ 0.78
SGCE-207ENST00000447873 JCHAINP01591 159 aa19.93■□□□□ 0.78
SGCE-207ENST00000447873 PABPC1P11940 636 aaKnown RBP19.93■□□□□ 0.78
SGCE-207ENST00000447873 IL9P15248 144 aa19.93■□□□□ 0.78
SGCE-207ENST00000447873 GLDCP23378 1020 aa19.93■□□□□ 0.78
SGCE-207ENST00000447873 PTPN3P26045 913 aa19.93■□□□□ 0.78
SGCE-207ENST00000447873 DGKGP49619 791 aa19.93■□□□□ 0.78
SGCE-207ENST00000447873 VPS41P49754 854 aa19.93■□□□□ 0.78
SGCE-207ENST00000447873 PLK1P53350 603 aa19.93■□□□□ 0.78
SGCE-207ENST00000447873 IFI35P80217 286 aaPredicted RBP19.93■□□□□ 0.78
SGCE-207ENST00000447873 WASHC5Q12768 1159 aa19.93■□□□□ 0.78
SGCE-207ENST00000447873 PLEKHG6Q3KR16 790 aa19.93■□□□□ 0.78
SGCE-207ENST00000447873 ITPRIPL2Q3MIP1 535 aa19.93■□□□□ 0.78
SGCE-207ENST00000447873 ASTLQ6HA08 431 aaPredicted RBP19.93■□□□□ 0.78
SGCE-207ENST00000447873 DCAF4L2Q8NA75 395 aa19.93■□□□□ 0.78
SGCE-207ENST00000447873 CCDC110Q8TBZ0 833 aa19.93■□□□□ 0.78
SGCE-207ENST00000447873 FATE1Q969F0 183 aa19.93■□□□□ 0.78
SGCE-207ENST00000447873 LMLNQ96KR4 655 aa19.93■□□□□ 0.78
SGCE-207ENST00000447873 VAT1Q99536 393 aa19.93■□□□□ 0.78
SGCE-207ENST00000447873 HINFPQ9BQA5 517 aa19.93■□□□□ 0.78
SGCE-207ENST00000447873 ERP44Q9BS26 406 aa19.93■□□□□ 0.78
SGCE-207ENST00000447873 CEP41Q9BYV8 373 aa19.93■□□□□ 0.78
SGCE-207ENST00000447873 TRIM31Q9BZY9 425 aa19.93■□□□□ 0.78
SGCE-207ENST00000447873 DMGDHQ9UI17 866 aaKnown RBP19.93■□□□□ 0.78
SGCE-207ENST00000447873 FBXO10Q9UK96 956 aa19.93■□□□□ 0.78
SGCE-207ENST00000447873 MIA3Q5JRA6 1907 aa19.92■□□□□ 0.78
SGCE-207ENST00000447873 TICRRQ7Z2Z1 1910 aa19.92■□□□□ 0.78
SGCE-207ENST00000447873 UNC80Q8N2C7 3258 aa19.92■□□□□ 0.78
SGCE-207ENST00000447873 A0A0A0MRY4 1105 aa19.92■□□□□ 0.78
SGCE-207ENST00000447873 ZSCAN5CA6NGD5 496 aaPredicted RBP19.92■□□□□ 0.78
SGCE-207ENST00000447873 ARNTLO00327 626 aa19.92■□□□□ 0.78
SGCE-207ENST00000447873 TULP3O75386 442 aa19.92■□□□□ 0.78
SGCE-207ENST00000447873 NEBLO76041 1014 aa19.92■□□□□ 0.78
SGCE-207ENST00000447873 GJA4P35212 333 aa19.92■□□□□ 0.78
SGCE-207ENST00000447873 ADCY8P40145 1251 aa19.92■□□□□ 0.78
SGCE-207ENST00000447873 RENBPP51606 427 aa19.92■□□□□ 0.78
SGCE-207ENST00000447873 GUCY2DQ02846 1103 aa19.92■□□□□ 0.78
SGCE-207ENST00000447873 ZBTB17Q13105 803 aa19.92■□□□□ 0.78
SGCE-207ENST00000447873 HNRNPDQ14103 355 aaKnown RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms