RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 GRIA2P42262 883 aa18.39■□□□□ 0.53
TRAPPC4-203ENST00000447216 DMC1Q14565 340 aa18.39■□□□□ 0.53
TRAPPC4-203ENST00000447216 FAM182AQ5T1J6 154 aa18.39■□□□□ 0.53
TRAPPC4-203ENST00000447216 FSTL4Q6MZW2 842 aa18.39■□□□□ 0.53
TRAPPC4-203ENST00000447216 LINGO4Q6UY18 593 aa18.39■□□□□ 0.53
TRAPPC4-203ENST00000447216 DCAF4L2Q8NA75 395 aa18.39■□□□□ 0.53
TRAPPC4-203ENST00000447216 CCNYQ8ND76 341 aa18.39■□□□□ 0.53
TRAPPC4-203ENST00000447216 CYB5D2Q8WUJ1 264 aa18.39■□□□□ 0.53
TRAPPC4-203ENST00000447216 FAM3CQ92520 227 aa18.39■□□□□ 0.53
TRAPPC4-203ENST00000447216 EZH1Q92800 747 aaPredicted RBP18.39■□□□□ 0.53
TRAPPC4-203ENST00000447216 OLFM3Q96PB7 478 aa18.39■□□□□ 0.53
TRAPPC4-203ENST00000447216 LGMNQ99538 433 aa18.39■□□□□ 0.53
TRAPPC4-203ENST00000447216 WNT16Q9UBV4 365 aa18.39■□□□□ 0.53
TRAPPC4-203ENST00000447216 IPO11Q9UI26 975 aaKnown RBP18.39■□□□□ 0.53
TRAPPC4-203ENST00000447216 H7C0C1 242 aa18.38■□□□□ 0.53
TRAPPC4-203ENST00000447216 KDELR3O43731 214 aa18.38■□□□□ 0.53
TRAPPC4-203ENST00000447216 ZMPSTE24O75844 475 aa18.38■□□□□ 0.53
TRAPPC4-203ENST00000447216 EGFP01133 1207 aa18.38■□□□□ 0.53
TRAPPC4-203ENST00000447216 ATP5OP48047 213 aa18.38■□□□□ 0.53
TRAPPC4-203ENST00000447216 NR2C2P49116 596 aa18.38■□□□□ 0.53
TRAPPC4-203ENST00000447216 STK19P49842 368 aaPredicted RBP18.38■□□□□ 0.53
TRAPPC4-203ENST00000447216 EIF3EP60228 445 aaKnown RBP18.38■□□□□ 0.53
TRAPPC4-203ENST00000447216 ZXDAP98168 799 aa18.38■□□□□ 0.53
TRAPPC4-203ENST00000447216 SNX1Q13596 522 aa18.38■□□□□ 0.53
TRAPPC4-203ENST00000447216 PDK1Q15118 436 aa18.38■□□□□ 0.53
TRAPPC4-203ENST00000447216 TMEM196Q5HYL7 178 aa18.38■□□□□ 0.53
TRAPPC4-203ENST00000447216 SIX5Q8N196 739 aa18.38■□□□□ 0.53
TRAPPC4-203ENST00000447216 TTC13Q8NBP0 860 aa18.38■□□□□ 0.53
TRAPPC4-203ENST00000447216 MAIP1Q8WWC4 291 aa18.38■□□□□ 0.53
TRAPPC4-203ENST00000447216 TTC17Q96AE7 1141 aa18.38■□□□□ 0.53
TRAPPC4-203ENST00000447216 SP110Q9HB58 689 aa18.38■□□□□ 0.53
TRAPPC4-203ENST00000447216 ELOVL2Q9NXB9 296 aa18.38■□□□□ 0.53
TRAPPC4-203ENST00000447216 NDRG2Q9UN36 371 aaKnown RBP18.38■□□□□ 0.53
TRAPPC4-203ENST00000447216 RAD54BQ9Y620 910 aa18.38■□□□□ 0.53
TRAPPC4-203ENST00000447216 ANKRD36A6QL64 1941 aa18.37■□□□□ 0.53
TRAPPC4-203ENST00000447216 MCF2LO15068 1137 aa18.37■□□□□ 0.53
TRAPPC4-203ENST00000447216 MAFKO60675 156 aa18.37■□□□□ 0.53
TRAPPC4-203ENST00000447216 PRAMEF11O60813 436 aa18.37■□□□□ 0.53
TRAPPC4-203ENST00000447216 MX2P20592 715 aa18.37■□□□□ 0.53
TRAPPC4-203ENST00000447216 SEC13P55735 322 aa18.37■□□□□ 0.53
TRAPPC4-203ENST00000447216 ARF5P84085 180 aa18.37■□□□□ 0.53
TRAPPC4-203ENST00000447216 PRKCQQ04759 706 aa18.37■□□□□ 0.53
TRAPPC4-203ENST00000447216 AP1B1Q10567 949 aa18.37■□□□□ 0.53
TRAPPC4-203ENST00000447216 PREPLQ4J6C6 727 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC4-203ENST00000447216 DNTTIP2Q5QJE6 756 aaKnown RBP18.37■□□□□ 0.53
TRAPPC4-203ENST00000447216 EMC10Q5UCC4 262 aa18.37■□□□□ 0.53
TRAPPC4-203ENST00000447216 BZW1Q7L1Q6 419 aaKnown RBP18.37■□□□□ 0.53
TRAPPC4-203ENST00000447216 PRELID2Q8N945 189 aa18.37■□□□□ 0.53
TRAPPC4-203ENST00000447216 MSANTD3Q96H12 275 aa18.37■□□□□ 0.53
TRAPPC4-203ENST00000447216 RPL10LQ96L21 214 aaKnown RBP18.37■□□□□ 0.53
TRAPPC4-203ENST00000447216 NAP1L3Q99457 506 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC4-203ENST00000447216 C2orf49Q9BVC5 232 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC4-203ENST00000447216 PDFQ9HBH1 243 aa18.37■□□□□ 0.53
TRAPPC4-203ENST00000447216 ZDHHC4Q9NPG8 344 aa18.37■□□□□ 0.53
TRAPPC4-203ENST00000447216 CDC23Q9UJX2 597 aa18.37■□□□□ 0.53
TRAPPC4-203ENST00000447216 DNPEPQ9ULA0 475 aa18.37■□□□□ 0.53
TRAPPC4-203ENST00000447216 HPCAL4Q9UM19 191 aa18.37■□□□□ 0.53
TRAPPC4-203ENST00000447216 TECTAO75443 2155 aa18.37■□□□□ 0.53
TRAPPC4-203ENST00000447216 K7EQS6 105 aa18.36■□□□□ 0.53
TRAPPC4-203ENST00000447216 KRIT1O00522 736 aa18.36■□□□□ 0.53
TRAPPC4-203ENST00000447216 MAN2B1O00754 1011 aa18.36■□□□□ 0.53
TRAPPC4-203ENST00000447216 PPP1R12AO14974 1030 aaPredicted RBP18.36■□□□□ 0.53
TRAPPC4-203ENST00000447216 LIASO43766 372 aa18.36■□□□□ 0.53
TRAPPC4-203ENST00000447216 MT-CO1P00395 513 aa18.36■□□□□ 0.53
TRAPPC4-203ENST00000447216 RBP3P10745 1247 aa18.36■□□□□ 0.53
TRAPPC4-203ENST00000447216 VAV1P15498 845 aa18.36■□□□□ 0.53
TRAPPC4-203ENST00000447216 PAFAH1B1P43034 410 aa18.36■□□□□ 0.53
TRAPPC4-203ENST00000447216 ECT2LQ008S8 904 aa18.36■□□□□ 0.53
TRAPPC4-203ENST00000447216 PPIDQ08752 370 aaKnown RBP18.36■□□□□ 0.53
TRAPPC4-203ENST00000447216 GRSF1Q12849 480 aaKnown RBP eCLIP18.36■□□□□ 0.53
TRAPPC4-203ENST00000447216 EGFLAMQ63HQ2 1017 aa18.36■□□□□ 0.53
TRAPPC4-203ENST00000447216 DARS2Q6PI48 645 aaKnown RBP18.36■□□□□ 0.53
TRAPPC4-203ENST00000447216 ZNF852Q6ZMS4 543 aa18.36■□□□□ 0.53
TRAPPC4-203ENST00000447216 SUGP1Q8IWZ8 645 aaKnown RBP18.36■□□□□ 0.53
TRAPPC4-203ENST00000447216 SLC35B2Q8TB61 432 aa18.36■□□□□ 0.53
TRAPPC4-203ENST00000447216 EXOC4Q96A65 974 aa18.36■□□□□ 0.53
TRAPPC4-203ENST00000447216 HDAC11Q96DB2 347 aa18.36■□□□□ 0.53
TRAPPC4-203ENST00000447216 QKIQ96PU8 341 aaKnown RBP eCLIP18.36■□□□□ 0.53
TRAPPC4-203ENST00000447216 RBM12Q9NTZ6 932 aaKnown RBP18.36■□□□□ 0.53
TRAPPC4-203ENST00000447216 HCN2Q9UL51 889 aa18.36■□□□□ 0.53
TRAPPC4-203ENST00000447216 ERVW-1Q9UQF0 538 aa18.36■□□□□ 0.53
TRAPPC4-203ENST00000447216 A0A0A0MRY4 1105 aa18.35■□□□□ 0.53
TRAPPC4-203ENST00000447216 K7ERQ8 282 aa18.35■□□□□ 0.53
TRAPPC4-203ENST00000447216 NCAM2O15394 837 aa18.35■□□□□ 0.53
TRAPPC4-203ENST00000447216 CD160O95971 181 aa18.35■□□□□ 0.53
TRAPPC4-203ENST00000447216 DRD1P21728 446 aa18.35■□□□□ 0.53
TRAPPC4-203ENST00000447216 TNFRSF4P43489 277 aa18.35■□□□□ 0.53
TRAPPC4-203ENST00000447216 IL10RBQ08334 325 aa18.35■□□□□ 0.53
TRAPPC4-203ENST00000447216 XRCC4Q13426 336 aa18.35■□□□□ 0.53
TRAPPC4-203ENST00000447216 PRKD1Q15139 912 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC4-203ENST00000447216 SLC45A4Q5BKX6 768 aa18.35■□□□□ 0.53
TRAPPC4-203ENST00000447216 CCDC13Q8IYE1 715 aa18.35■□□□□ 0.53
TRAPPC4-203ENST00000447216 USP33Q8TEY7 942 aa18.35■□□□□ 0.53
TRAPPC4-203ENST00000447216 TFB1MQ8WVM0 346 aaKnown RBP18.35■□□□□ 0.53
TRAPPC4-203ENST00000447216 MRGPRX3Q96LB0 322 aa18.35■□□□□ 0.53
TRAPPC4-203ENST00000447216 TSGA13Q96PP4 275 aa18.35■□□□□ 0.53
TRAPPC4-203ENST00000447216 FOXQ1Q9C009 403 aa18.35■□□□□ 0.53
TRAPPC4-203ENST00000447216 SEPT10Q9P0V9 454 aa18.35■□□□□ 0.53
TRAPPC4-203ENST00000447216 RNF14Q9UBS8 474 aa18.35■□□□□ 0.53
TRAPPC4-203ENST00000447216 UBA2Q9UBT2 640 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms