RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 ZDHHC2Q9UIJ5 367 aa13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 PIN4Q9Y237 131 aaKnown RBP13.39□□□□□ -0.27
SLC48A1-201ENST00000442218 NFKB1P19838 968 aa13.38□□□□□ -0.27
SLC48A1-201ENST00000442218 GP5P40197 560 aa13.38□□□□□ -0.27
SLC48A1-201ENST00000442218 FKBP1BP68106 108 aa13.38□□□□□ -0.27
SLC48A1-201ENST00000442218 MPP1Q00013 466 aa13.38□□□□□ -0.27
SLC48A1-201ENST00000442218 TNFAIP2Q03169 654 aa13.38□□□□□ -0.27
SLC48A1-201ENST00000442218 CYTH1Q15438 398 aa13.38□□□□□ -0.27
SLC48A1-201ENST00000442218 PITRM1Q5JRX3 1037 aa13.38□□□□□ -0.27
SLC48A1-201ENST00000442218 ARCQ7LC44 396 aa13.38□□□□□ -0.27
SLC48A1-201ENST00000442218 KBTBD7Q8WVZ9 684 aa13.38□□□□□ -0.27
SLC48A1-201ENST00000442218 SPATA16Q9BXB7 569 aa13.38□□□□□ -0.27
SLC48A1-201ENST00000442218 C5orf42Q9H799 3197 aa13.38□□□□□ -0.27
SLC48A1-201ENST00000442218 UNCXA6NJT0 531 aa13.38□□□□□ -0.27
SLC48A1-201ENST00000442218 KLHL2O95198 593 aa13.38□□□□□ -0.27
SLC48A1-201ENST00000442218 USP17L7P0C7H9 530 aa13.38□□□□□ -0.27
SLC48A1-201ENST00000442218 DPP6P42658 865 aa13.38□□□□□ -0.27
SLC48A1-201ENST00000442218 HUNKP57058 714 aa13.38□□□□□ -0.27
SLC48A1-201ENST00000442218 CCNA1P78396 465 aa13.38□□□□□ -0.27
SLC48A1-201ENST00000442218 DEUP1Q05D60 604 aa13.38□□□□□ -0.27
SLC48A1-201ENST00000442218 POU5F1BQ06416 359 aa13.38□□□□□ -0.27
SLC48A1-201ENST00000442218 ARL13AQ5H913 290 aaPredicted RBP13.38□□□□□ -0.27
SLC48A1-201ENST00000442218 RWDD4Q6NW29 188 aaKnown RBP13.38□□□□□ -0.27
SLC48A1-201ENST00000442218 LRRC8BQ6P9F7 803 aa13.38□□□□□ -0.27
SLC48A1-201ENST00000442218 CYP2R1Q6VVX0 501 aa13.38□□□□□ -0.27
SLC48A1-201ENST00000442218 MARK2Q7KZI7 788 aaKnown RBP13.38□□□□□ -0.27
SLC48A1-201ENST00000442218 SPATA24Q86W54 205 aa13.38□□□□□ -0.27
SLC48A1-201ENST00000442218 OSTM1Q86WC4 334 aa13.38□□□□□ -0.27
SLC48A1-201ENST00000442218 FBXW8Q8N3Y1 598 aa13.38□□□□□ -0.27
SLC48A1-201ENST00000442218 LRRC39Q96DD0 335 aa13.38□□□□□ -0.27
SLC48A1-201ENST00000442218 PCDHAC1Q9H158 963 aa13.38□□□□□ -0.27
SLC48A1-201ENST00000442218 UBAP1Q9NZ09 502 aa13.38□□□□□ -0.27
SLC48A1-201ENST00000442218 DCDC2Q9UHG0 476 aa13.38□□□□□ -0.27
SLC48A1-201ENST00000442218 DTNAQ9Y4J8 743 aa13.38□□□□□ -0.27
SLC48A1-201ENST00000442218 SF3B1O75533 1304 aaKnown RBP eCLIP13.38□□□□□ -0.271e-19■■■■■ 448
SLC48A1-201ENST00000442218 C9IYK1 514 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 G3V2L1 256 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 H3BNX3 289 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 DNAJA2O60884 412 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 MX2P20592 715 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 PIK3R1P27986 724 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 ALDH1A3P47895 512 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 GRIA4P48058 902 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 GJA9P57773 515 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 BST2Q10589 180 aaKnown RBP13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 RALGDSQ12967 914 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 USP10Q14694 798 aaKnown RBP13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 GPRIN1Q7Z2K8 1008 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 BHLHE22Q8NFJ8 381 aaPredicted RBP13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 URGCPQ8TCY9 931 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 TRIM8Q9BZR9 551 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 NMRAL1Q9HBL8 299 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 PLXNB2O15031 1838 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 PLXNA1Q9UIW2 1896 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 C15orf38-AP3S2A0A0A6YYH1 394 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 ATP6AP2A0A1C7CYW4 349 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 TTC24A2A3L6 582 aaPredicted RBP13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 YJEFN3A6XGL0 299 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 AURKAO14965 403 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 ATP6AP2O75787 350 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 NCAM1P13591 858 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 CDK7P50613 346 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 FLOT2Q14254 428 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 TMCO4Q5TGY1 634 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 OTUD1Q5VV17 481 aaPredicted RBP13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 C9orf57Q5W0N0 161 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 GPR142Q7Z601 462 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 ARPINQ7Z6K5 226 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 ST13P4Q8IZP2 240 aaPredicted RBP13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 ICA1LQ8NDH6 482 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 FAM110BQ8TC76 370 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 GRIN3AQ8TCU5 1115 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 HASPINQ8TF76 798 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 CMTM5Q96DZ9 223 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 NDNQ99608 321 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 PRPF18Q99633 342 aaKnown RBP13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 GORASP1Q9BQQ3 440 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 CDH19Q9H159 772 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 LRRC4Q9HBW1 653 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 ADA2Q9NZK5 511 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 PDP2Q9P2J9 529 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 FZD10Q9ULW2 581 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 ARHGAP26Q9UNA1 814 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 RUVBL2Q9Y230 463 aaKnown RBP13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 SLC45A1Q9Y2W3 748 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 ASB14A6NK59 587 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 KPNA7A9QM74 516 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 TREHO43280 583 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 UQCRBP14927 111 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 PTPN3P26045 913 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 CNGA3Q16281 694 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 CCL14Q16627 93 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 FBXO48Q5FWF7 155 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 FBXO47Q5MNV8 452 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 WSCD1Q658N2 575 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 GK5Q6ZS86 529 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 KCNMB4Q86W47 210 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 NPLOC4Q8TAT6 608 aa13.37□□□□□ -0.27
SLC48A1-201ENST00000442218 EXT2Q93063 718 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms