RNA–Protein interactions for RNA: ENST00000440235.6

FMR1-208, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-208ENST00000440235 CCDC153Q494R4 210 aa20.85■□□□□ 0.93
FMR1-208ENST00000440235 UBAP2Q5T6F2 1119 aaKnown RBP20.85■□□□□ 0.93
FMR1-208ENST00000440235 DEFB132Q7Z7B7 95 aa20.85■□□□□ 0.93
FMR1-208ENST00000440235 APLFQ8IW19 511 aaPredicted RBP20.85■□□□□ 0.93
FMR1-208ENST00000440235 P2RX7Q99572 595 aaKnown RBP20.85■□□□□ 0.93
FMR1-208ENST00000440235 SHANK3Q9BYB0 1731 aa20.85■□□□□ 0.93
FMR1-208ENST00000440235 A0A0A0MRY4 1105 aa20.85■□□□□ 0.93
FMR1-208ENST00000440235 IGKV6D-41A0A0C4DH26 115 aa20.85■□□□□ 0.93
FMR1-208ENST00000440235 HNRNPCL2B2RXH8 293 aa20.85■□□□□ 0.93
FMR1-208ENST00000440235 TNPO2O14787 897 aaKnown RBP20.85■□□□□ 0.93
FMR1-208ENST00000440235 C2P06681 752 aa20.85■□□□□ 0.93
FMR1-208ENST00000440235 BPGMP07738 259 aa20.85■□□□□ 0.93
FMR1-208ENST00000440235 VCLP18206 1134 aa20.85■□□□□ 0.93
FMR1-208ENST00000440235 CDH2P19022 906 aaPredicted RBP20.85■□□□□ 0.93
FMR1-208ENST00000440235 ZNF143P52747 638 aaPredicted RBP20.85■□□□□ 0.93
FMR1-208ENST00000440235 RUNX1T1Q06455 604 aa20.85■□□□□ 0.93
FMR1-208ENST00000440235 KRT72Q14CN4 511 aa20.85■□□□□ 0.93
FMR1-208ENST00000440235 LIN52Q52LA3 116 aa20.85■□□□□ 0.93
FMR1-208ENST00000440235 GRTP1Q5TC63 336 aa20.85■□□□□ 0.93
FMR1-208ENST00000440235 OR8H2Q8N162 312 aa20.85■□□□□ 0.93
FMR1-208ENST00000440235 ELMO1Q92556 727 aa20.85■□□□□ 0.93
FMR1-208ENST00000440235 SPATA13Q96N96 652 aa20.85■□□□□ 0.93
FMR1-208ENST00000440235 LENG8Q96PV6 779 aaPredicted RBP20.85■□□□□ 0.93
FMR1-208ENST00000440235 ARHGEF3Q9NR81 526 aa20.85■□□□□ 0.93
FMR1-208ENST00000440235 CRLS1Q9UJA2 301 aa20.85■□□□□ 0.93
FMR1-208ENST00000440235 NOCTQ9UK39 431 aaKnown RBP20.85■□□□□ 0.93
FMR1-208ENST00000440235 TCRBV7S3A2A0A539 114 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 TRDMT1O14717 391 aaKnown RBP20.84■□□□□ 0.93
FMR1-208ENST00000440235 SEMA5AQ13591 1074 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 ZPBP2Q6X784 338 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 PIGZQ86VD9 579 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 TFAP2BQ92481 460 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 KATNAL1Q9BW62 490 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 EBF3Q9H4W6 596 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 COL20A1Q9P218 1284 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 CCL22O00626 93 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 HDAC3O15379 428 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 TMEM63AO94886 807 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 SLC7A2P52569 658 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 ARHGEF7Q14155 803 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 PITRM1Q5JRX3 1037 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 SH3BP5LQ7L8J4 393 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 CDT1Q9H211 546 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 NOL11Q9H8H0 719 aaKnown RBP20.84■□□□□ 0.93
FMR1-208ENST00000440235 CBX4O00257 560 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 ASS1P00966 412 aaKnown RBP20.84■□□□□ 0.93
FMR1-208ENST00000440235 ERBB2P04626 1255 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 RBP1P09455 135 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 TUBP50607 506 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 NEK3P51956 506 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 PATL1Q86TB9 770 aaKnown RBP20.84■□□□□ 0.93
FMR1-208ENST00000440235 METTL6Q8TCB7 284 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 TBCBQ99426 244 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 CPNE1Q99829 537 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 SPATC1LQ9H0A9 340 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 USE1Q9NZ43 259 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 PLLPQ9Y342 182 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 CACNA1SQ13698 1873 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 LRP5O75197 1615 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 CHADO15335 359 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 SERPINA6P08185 405 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 PIK3R1P27986 724 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 CCDC142Q17RM4 750 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 PACS1Q6VY07 963 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 GK5Q6ZS86 529 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 PQLC1Q8N2U9 271 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 HBEGFQ99075 208 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 C1orf50Q9BV19 199 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 ZNF556Q9HAH1 456 aa20.84■□□□□ 0.93
FMR1-208ENST00000440235 HBS1LQ9Y450 684 aaKnown RBP20.84■□□□□ 0.93
FMR1-208ENST00000440235 ATXN1P54253 815 aaKnown RBP20.83■□□□□ 0.93
FMR1-208ENST00000440235 TAF2Q6P1X5 1199 aa20.83■□□□□ 0.93
FMR1-208ENST00000440235 BPIFB6Q8NFQ5 453 aa20.83■□□□□ 0.93
FMR1-208ENST00000440235 SLC44A1Q8WWI5 657 aa20.83■□□□□ 0.93
FMR1-208ENST00000440235 LZICQ8WZA0 190 aa20.83■□□□□ 0.93
FMR1-208ENST00000440235 DCUN1D1Q96GG9 259 aa20.83■□□□□ 0.93
FMR1-208ENST00000440235 SLCO1B7G3V0H7 640 aa20.83■□□□□ 0.93
FMR1-208ENST00000440235 TSC22D2O75157 780 aa20.83■□□□□ 0.93
FMR1-208ENST00000440235 GLP2RO95838 553 aa20.83■□□□□ 0.93
FMR1-208ENST00000440235 ABCB1P08183 1280 aaPredicted RBP20.83■□□□□ 0.93
FMR1-208ENST00000440235 ERCC2P18074 760 aa20.83■□□□□ 0.93
FMR1-208ENST00000440235 BDNFP23560 247 aa20.83■□□□□ 0.93
FMR1-208ENST00000440235 CDKN2BP42772 138 aa20.83■□□□□ 0.93
FMR1-208ENST00000440235 TGFB2P61812 414 aa20.83■□□□□ 0.93
FMR1-208ENST00000440235 SLC15A2Q16348 729 aa20.83■□□□□ 0.93
FMR1-208ENST00000440235 SPDYE7PQ495Y7 208 aa20.83■□□□□ 0.93
FMR1-208ENST00000440235 MARC1Q5VT66 337 aa20.83■□□□□ 0.93
FMR1-208ENST00000440235 SATL1Q86VE3 508 aa20.83■□□□□ 0.93
FMR1-208ENST00000440235 ABT1Q9ULW3 272 aaKnown RBP20.83■□□□□ 0.93
FMR1-208ENST00000440235 U3KQV3 271 aa20.83■□□□□ 0.93
FMR1-208ENST00000440235 ZNF536O15090 1300 aa20.83■□□□□ 0.92
FMR1-208ENST00000440235 RECQL4O94761 1208 aa20.83■□□□□ 0.92
FMR1-208ENST00000440235 PPP1R26Q5T8A7 1209 aaPredicted RBP20.83■□□□□ 0.92
FMR1-208ENST00000440235 CENPLQ8N0S6 344 aaPredicted RBP20.83■□□□□ 0.92
FMR1-208ENST00000440235 REPS2Q8NFH8 660 aa20.83■□□□□ 0.92
FMR1-208ENST00000440235 MTFMTQ96DP5 389 aaKnown RBP20.83■□□□□ 0.92
FMR1-208ENST00000440235 SYT15Q9BQS2 421 aa20.83■□□□□ 0.92
FMR1-208ENST00000440235 SLC12A4Q9UP95 1085 aa20.83■□□□□ 0.92
FMR1-208ENST00000440235 SLC12A8A0AV02 714 aa20.82■□□□□ 0.92
FMR1-208ENST00000440235 RGSL1A5PLK6 1076 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms