RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 VASPP50552 380 aaPredicted RBP24.62■■□□□ 1.53
CPNE1-217ENST00000439669 LIMK1P53667 647 aa24.62■■□□□ 1.53
CPNE1-217ENST00000439669 SCAPQ12770 1279 aa24.62■■□□□ 1.53
CPNE1-217ENST00000439669 DLG2Q15700 870 aa24.62■■□□□ 1.53
CPNE1-217ENST00000439669 DUOXA1Q1HG43 343 aa24.62■■□□□ 1.53
CPNE1-217ENST00000439669 IL31Q6EBC2 164 aa24.62■■□□□ 1.53
CPNE1-217ENST00000439669 ZNF783Q6ZMS7 281 aa24.62■■□□□ 1.53
CPNE1-217ENST00000439669 RABEPKQ7Z6M1 372 aa24.62■■□□□ 1.53
CPNE1-217ENST00000439669 SH2D3CQ8N5H7 860 aa24.62■■□□□ 1.53
CPNE1-217ENST00000439669 ATP11CQ8NB49 1132 aa24.62■■□□□ 1.53
CPNE1-217ENST00000439669 CEP76Q8TAP6 659 aa24.62■■□□□ 1.53
CPNE1-217ENST00000439669 FBXL12Q9NXK8 326 aa24.62■■□□□ 1.53
CPNE1-217ENST00000439669 MYO1AQ9UBC5 1043 aa24.62■■□□□ 1.53
CPNE1-217ENST00000439669 DOCK4Q8N1I0 1966 aa24.62■■□□□ 1.53
CPNE1-217ENST00000439669 A0A1W2PP55 124 aa24.61■■□□□ 1.53
CPNE1-217ENST00000439669 BNIP3LO60238 219 aa24.61■■□□□ 1.53
CPNE1-217ENST00000439669 SEMA4FO95754 770 aa24.61■■□□□ 1.53
CPNE1-217ENST00000439669 IL1BP01584 269 aa24.61■■□□□ 1.53
CPNE1-217ENST00000439669 RHOQP17081 205 aa24.61■■□□□ 1.53
CPNE1-217ENST00000439669 CASP14P31944 242 aa24.61■■□□□ 1.53
CPNE1-217ENST00000439669 SLC8A1P32418 973 aa24.61■■□□□ 1.53
CPNE1-217ENST00000439669 GNA12Q03113 381 aa24.61■■□□□ 1.53
CPNE1-217ENST00000439669 SFSWAPQ12872 951 aaKnown RBP24.61■■□□□ 1.53
CPNE1-217ENST00000439669 DCAF12L1Q5VU92 463 aa24.61■■□□□ 1.53
CPNE1-217ENST00000439669 Q6ZVU0 165 aa24.61■■□□□ 1.53
CPNE1-217ENST00000439669 USP30Q70CQ3 517 aa24.61■■□□□ 1.53
CPNE1-217ENST00000439669 PYROXD2Q8N2H3 581 aa24.61■■□□□ 1.53
CPNE1-217ENST00000439669 OR8D1Q8WZ84 308 aa24.61■■□□□ 1.53
CPNE1-217ENST00000439669 SNX19Q92543 992 aa24.61■■□□□ 1.53
CPNE1-217ENST00000439669 FAM129BQ96TA1 746 aa24.61■■□□□ 1.53
CPNE1-217ENST00000439669 MIR1-1HGQ9H1L0 117 aa24.61■■□□□ 1.53
CPNE1-217ENST00000439669 ATP13A1Q9HD20 1204 aa24.61■■□□□ 1.53
CPNE1-217ENST00000439669 SUSD2Q9UGT4 822 aa24.61■■□□□ 1.53
CPNE1-217ENST00000439669 ADAMTS1Q9UHI8 967 aa24.61■■□□□ 1.53
CPNE1-217ENST00000439669 HS3ST2Q9Y278 367 aa24.61■■□□□ 1.53
CPNE1-217ENST00000439669 SCINQ9Y6U3 715 aa24.61■■□□□ 1.53
CPNE1-217ENST00000439669 NYNRINQ9P2P1 1898 aaKnown RBP24.6■■□□□ 1.53
CPNE1-217ENST00000439669 DCDC2BA2VCK2 349 aa24.6■■□□□ 1.53
CPNE1-217ENST00000439669 METTL12A8MUP2 240 aa24.6■■□□□ 1.53
CPNE1-217ENST00000439669 CBX4O00257 560 aa24.6■■□□□ 1.53
CPNE1-217ENST00000439669 ADH1BP00325 375 aa24.6■■□□□ 1.53
CPNE1-217ENST00000439669 MT-CO1P00395 513 aa24.6■■□□□ 1.53
CPNE1-217ENST00000439669 MYBL1P10243 752 aa24.6■■□□□ 1.53
CPNE1-217ENST00000439669 SRCP12931 536 aa24.6■■□□□ 1.53
CPNE1-217ENST00000439669 GNSP15586 552 aa24.6■■□□□ 1.53
CPNE1-217ENST00000439669 MAPKAPK2P49137 400 aa24.6■■□□□ 1.53
CPNE1-217ENST00000439669 SLC23A3Q6PIS1 610 aa24.6■■□□□ 1.53
CPNE1-217ENST00000439669 LINGO4Q6UY18 593 aa24.6■■□□□ 1.53
CPNE1-217ENST00000439669 DSG4Q86SJ6 1040 aa24.6■■□□□ 1.53
CPNE1-217ENST00000439669 OMDQ99983 421 aa24.6■■□□□ 1.53
CPNE1-217ENST00000439669 PCED1AQ9H1Q7 454 aa24.6■■□□□ 1.53
CPNE1-217ENST00000439669 C6orf106Q9H6K1 298 aaPredicted RBP24.6■■□□□ 1.53
CPNE1-217ENST00000439669 SGK2Q9HBY8 427 aa24.6■■□□□ 1.53
CPNE1-217ENST00000439669 DNAI1Q9UI46 699 aa24.6■■□□□ 1.53
CPNE1-217ENST00000439669 FZD10Q9ULW2 581 aa24.6■■□□□ 1.53
CPNE1-217ENST00000439669 SLC6A14Q9UN76 642 aa24.6■■□□□ 1.53
CPNE1-217ENST00000439669 K7ERQ8 282 aa24.59■■□□□ 1.53
CPNE1-217ENST00000439669 RNASEH2AO75792 299 aaKnown RBP24.59■■□□□ 1.53
CPNE1-217ENST00000439669 GLDCP23378 1020 aa24.59■■□□□ 1.53
CPNE1-217ENST00000439669 L1CAMP32004 1257 aa24.59■■□□□ 1.53
CPNE1-217ENST00000439669 ETFBP38117 255 aa24.59■■□□□ 1.53
CPNE1-217ENST00000439669 AIF1P55008 147 aa24.59■■□□□ 1.53
CPNE1-217ENST00000439669 ERMP1Q7Z2K6 904 aa24.59■■□□□ 1.53
CPNE1-217ENST00000439669 NLRP14Q86W24 1093 aa24.59■■□□□ 1.53
CPNE1-217ENST00000439669 TRIM7Q9C029 511 aa24.59■■□□□ 1.53
CPNE1-217ENST00000439669 ISCUQ9H1K1 167 aa24.59■■□□□ 1.53
CPNE1-217ENST00000439669 MRPL47Q9HD33 250 aaKnown RBP24.59■■□□□ 1.53
CPNE1-217ENST00000439669 TMEM9BQ9NQ34 198 aa24.59■■□□□ 1.53
CPNE1-217ENST00000439669 FSCN3Q9NQT6 498 aa24.59■■□□□ 1.53
CPNE1-217ENST00000439669 TMEM248Q9NWD8 314 aa24.59■■□□□ 1.53
CPNE1-217ENST00000439669 SERGEFQ9UGK8 458 aa24.59■■□□□ 1.53
CPNE1-217ENST00000439669 NEU3Q9UQ49 428 aa24.59■■□□□ 1.53
CPNE1-217ENST00000439669 NUMA1Q14980 2115 aa24.59■■□□□ 1.53
CPNE1-217ENST00000439669 TMEM191CA6NGB0 347 aa24.58■■□□□ 1.53
CPNE1-217ENST00000439669 FAM47DPA6NHR8 397 aa24.58■■□□□ 1.53
CPNE1-217ENST00000439669 C4orf47A7E2U8 309 aa24.58■■□□□ 1.53
CPNE1-217ENST00000439669 CREB3O43889 395 aa24.58■■□□□ 1.53
CPNE1-217ENST00000439669 SERPINF2P08697 491 aa24.58■■□□□ 1.53
CPNE1-217ENST00000439669 C5AR1P21730 350 aa24.58■■□□□ 1.53
CPNE1-217ENST00000439669 EPHB2P29323 1055 aa24.58■■□□□ 1.53
CPNE1-217ENST00000439669 MAPK8P45983 427 aa24.58■■□□□ 1.53
CPNE1-217ENST00000439669 CLCN6P51797 869 aa24.58■■□□□ 1.53
CPNE1-217ENST00000439669 GFPT1Q06210 699 aaPredicted RBP24.58■■□□□ 1.53
CPNE1-217ENST00000439669 SPECC1LQ69YQ0 1117 aa24.58■■□□□ 1.53
CPNE1-217ENST00000439669 RETSATQ6NUM9 610 aa24.58■■□□□ 1.53
CPNE1-217ENST00000439669 HDDC3Q8N4P3 179 aa24.58■■□□□ 1.53
CPNE1-217ENST00000439669 ZCCHC9Q8N567 271 aaKnown RBP24.58■■□□□ 1.53
CPNE1-217ENST00000439669 DNASE2BQ8WZ79 361 aa24.58■■□□□ 1.53
CPNE1-217ENST00000439669 CCDC114Q96M63 670 aa24.58■■□□□ 1.53
CPNE1-217ENST00000439669 EPAS1Q99814 870 aa24.58■■□□□ 1.53
CPNE1-217ENST00000439669 RETREG1Q9H6L5 497 aa24.58■■□□□ 1.53
CPNE1-217ENST00000439669 NDFIP2Q9NV92 336 aa24.58■■□□□ 1.53
CPNE1-217ENST00000439669 DMXL1Q9Y485 3027 aa24.57■■□□□ 1.52
CPNE1-217ENST00000439669 RNF8O76064 485 aa24.57■■□□□ 1.52
CPNE1-217ENST00000439669 FSBPO95073 299 aa24.57■■□□□ 1.52
CPNE1-217ENST00000439669 ENGP17813 658 aa24.57■■□□□ 1.52
CPNE1-217ENST00000439669 ACVRL1P37023 503 aa24.57■■□□□ 1.52
CPNE1-217ENST00000439669 ATXN3P54252 364 aaPredicted RBP24.57■■□□□ 1.52
CPNE1-217ENST00000439669 ZNF252P-AS1Q0IIN9 211 aa24.57■■□□□ 1.52
CPNE1-217ENST00000439669 TRIM14Q14142 442 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms