RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 C16orf89Q6UX73 402 aa12.29□□□□□ -0.44
NEK1-201ENST00000439128 FAM111AQ96PZ2 611 aa12.29□□□□□ -0.44
NEK1-201ENST00000439128 GANQ9H2C0 597 aa12.29□□□□□ -0.44
NEK1-201ENST00000439128 ERVW-1Q9UQF0 538 aa12.29□□□□□ -0.44
NEK1-201ENST00000439128 SLIT3O75094 1523 aa12.29□□□□□ -0.44
NEK1-201ENST00000439128 PSMA3P25788 255 aa12.29□□□□□ -0.44
NEK1-201ENST00000439128 HNF4AP41235 474 aa12.29□□□□□ -0.44
NEK1-201ENST00000439128 CLK3P49761 638 aaKnown RBP12.29□□□□□ -0.44
NEK1-201ENST00000439128 PARVBQ9HBI1 364 aa12.29□□□□□ -0.44
NEK1-201ENST00000439128 H3BMM5 538 aa12.29□□□□□ -0.44
NEK1-201ENST00000439128 DNM1LO00429 736 aa12.29□□□□□ -0.44
NEK1-201ENST00000439128 GCATO75600 419 aa12.29□□□□□ -0.44
NEK1-201ENST00000439128 SLC10A3P09131 477 aa12.29□□□□□ -0.44
NEK1-201ENST00000439128 GSTM1P09488 218 aa12.29□□□□□ -0.44
NEK1-201ENST00000439128 SLC5A3P53794 718 aa12.29□□□□□ -0.44
NEK1-201ENST00000439128 GALNT3Q14435 633 aa12.29□□□□□ -0.44
NEK1-201ENST00000439128 VITQ6UXI7 678 aa12.29□□□□□ -0.44
NEK1-201ENST00000439128 GRAMD1AQ96CP6 724 aa12.29□□□□□ -0.44
NEK1-201ENST00000439128 ADNPQ9H2P0 1102 aa12.29□□□□□ -0.44
NEK1-201ENST00000439128 MANSC1Q9H8J5 431 aa12.29□□□□□ -0.44
NEK1-201ENST00000439128 KLHL28Q9NXS3 571 aa12.29□□□□□ -0.44
NEK1-201ENST00000439128 CASZ1Q86V15 1759 aa12.29□□□□□ -0.44
NEK1-201ENST00000439128 GUCY1B2O75343 617 aa12.29□□□□□ -0.44
NEK1-201ENST00000439128 KRT33AO76009 404 aa12.29□□□□□ -0.44
NEK1-201ENST00000439128 ICAM3P32942 547 aa12.29□□□□□ -0.44
NEK1-201ENST00000439128 GYS2P54840 703 aa12.29□□□□□ -0.44
NEK1-201ENST00000439128 TMEM63BQ5T3F8 832 aa12.29□□□□□ -0.44
NEK1-201ENST00000439128 ETNPPLQ8TBG4 499 aa12.29□□□□□ -0.44
NEK1-201ENST00000439128 DPEP2Q9H4A9 486 aa12.29□□□□□ -0.44
NEK1-201ENST00000439128 CNGB3Q9NQW8 809 aa12.29□□□□□ -0.44
NEK1-201ENST00000439128 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.29□□□□□ -0.44
NEK1-201ENST00000439128 POLR1DQ9Y2S0 133 aa12.29□□□□□ -0.44
NEK1-201ENST00000439128 C1RP00736 705 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 CCNB1P14635 433 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 AP2B1P63010 937 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 RGS1Q08116 209 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 GRM3Q14832 879 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 ACAP1Q15027 740 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 MILR1Q7Z6M3 343 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 SAPCD2Q86UD0 394 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 B3GALT6Q96L58 329 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 MCCC1Q96RQ3 725 aaPredicted RBP12.28□□□□□ -0.44
NEK1-201ENST00000439128 FAM126AQ9BYI3 521 aaPredicted RBP12.28□□□□□ -0.44
NEK1-201ENST00000439128 ACTR5Q9H9F9 607 aaPredicted RBP12.28□□□□□ -0.44
NEK1-201ENST00000439128 URADA6NGE7 173 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 TMEM114B3SHH9 223 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 PRNPP04156 253 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 CHN1P15882 459 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 INAVAQ3KP66 663 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 CYP4Z1Q86W10 505 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 POMGNT2Q8NAT1 580 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 PRCCQ92733 491 aaPredicted RBP12.28□□□□□ -0.44
NEK1-201ENST00000439128 FCRL2Q96LA5 508 aaPredicted RBP12.28□□□□□ -0.44
NEK1-201ENST00000439128 HPSEQ9Y251 543 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 ASF1AQ9Y294 204 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 A0A1W2PRU2 124 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 CCDC189A1A4V9 331 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 PAGE1O75459 146 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 DAB1O75553 588 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 UGT2B4P06133 528 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 RPSAP08865 295 aaKnown RBP12.28□□□□□ -0.44
NEK1-201ENST00000439128 PGAM1P18669 254 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 RFWD3Q6PCD5 774 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 KAT5Q92993 513 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 PTPRHQ9HD43 1115 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 SCAMP1O15126 338 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 SLC31A1O15431 190 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 PIRTP0C851 137 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 CCNG2Q16589 344 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 ECHDC2Q86YB7 292 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 SLC22A9Q8IVM8 553 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 ZSCAN18Q8TBC5 510 aaPredicted RBP12.28□□□□□ -0.44
NEK1-201ENST00000439128 PPP1R10Q96QC0 940 aaKnown RBP12.28□□□□□ -0.44
NEK1-201ENST00000439128 CLDN11O75508 207 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 ALAS2P22557 587 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 MAPK7Q13164 816 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 PDPK2PQ6A1A2 396 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 C12orf42Q96LP6 360 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 GPR88Q9GZN0 384 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 NMRAL1Q9HBL8 299 aa12.28□□□□□ -0.44
NEK1-201ENST00000439128 BCL9LQ86UU0 1499 aa12.27□□□□□ -0.44
NEK1-201ENST00000439128 SLC38A8A6NNN8 435 aa12.27□□□□□ -0.44
NEK1-201ENST00000439128 KPNA5O15131 536 aa12.27□□□□□ -0.44
NEK1-201ENST00000439128 GPR15P49685 360 aa12.27□□□□□ -0.44
NEK1-201ENST00000439128 FOXM1Q08050 763 aa12.27□□□□□ -0.44
NEK1-201ENST00000439128 ELP6Q0PNE2 266 aa12.27□□□□□ -0.44
NEK1-201ENST00000439128 ZNHIT3Q15649 155 aaPredicted RBP12.27□□□□□ -0.44
NEK1-201ENST00000439128 AASDHQ4L235 1098 aaPredicted RBP12.27□□□□□ -0.44
NEK1-201ENST00000439128 CNSTQ6PJW8 725 aa12.27□□□□□ -0.44
NEK1-201ENST00000439128 SPATA21Q7Z572 469 aa12.27□□□□□ -0.44
NEK1-201ENST00000439128 MYO19Q96H55 970 aa12.27□□□□□ -0.44
NEK1-201ENST00000439128 COL20A1Q9P218 1284 aa12.27□□□□□ -0.44
NEK1-201ENST00000439128 LRRC14BA6NHZ5 514 aa12.27□□□□□ -0.44
NEK1-201ENST00000439128 NRP1O14786 923 aa12.27□□□□□ -0.44
NEK1-201ENST00000439128 AVILO75366 819 aa12.27□□□□□ -0.44
NEK1-201ENST00000439128 RBL1P28749 1068 aa12.27□□□□□ -0.44
NEK1-201ENST00000439128 RRM2P31350 389 aa12.27□□□□□ -0.44
NEK1-201ENST00000439128 AKT2P31751 481 aa12.27□□□□□ -0.44
NEK1-201ENST00000439128 BMPR2Q13873 1038 aa12.27□□□□□ -0.44
NEK1-201ENST00000439128 SPANXN3Q5MJ09 141 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms