RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 FNIP1Q8TF40 1166 aa25.35■■□□□ 1.65
RAPGEF1-206ENST00000438647 FRS2Q8WU20 508 aa25.35■■□□□ 1.65
RAPGEF1-206ENST00000438647 PSMB7Q99436 277 aa25.35■■□□□ 1.65
RAPGEF1-206ENST00000438647 ISCUQ9H1K1 167 aa25.35■■□□□ 1.65
RAPGEF1-206ENST00000438647 SGK2Q9HBY8 427 aa25.35■■□□□ 1.65
RAPGEF1-206ENST00000438647 ADAMTS1Q9UHI8 967 aa25.35■■□□□ 1.65
RAPGEF1-206ENST00000438647 VPS51Q9UID3 782 aa25.35■■□□□ 1.65
RAPGEF1-206ENST00000438647 A0A0D9SEW6 157 aa25.34■■□□□ 1.65
RAPGEF1-206ENST00000438647 PATE3B3GLJ2 98 aa25.34■■□□□ 1.65
RAPGEF1-206ENST00000438647 GNSP15586 552 aa25.34■■□□□ 1.65
RAPGEF1-206ENST00000438647 L1CAMP32004 1257 aa25.34■■□□□ 1.65
RAPGEF1-206ENST00000438647 CLCN6P51797 869 aa25.34■■□□□ 1.65
RAPGEF1-206ENST00000438647 TRIM14Q14142 442 aa25.34■■□□□ 1.65
RAPGEF1-206ENST00000438647 DLG2Q15700 870 aa25.34■■□□□ 1.65
RAPGEF1-206ENST00000438647 IL31Q6EBC2 164 aa25.34■■□□□ 1.65
RAPGEF1-206ENST00000438647 ERMP1Q7Z2K6 904 aa25.34■■□□□ 1.65
RAPGEF1-206ENST00000438647 DGLUCYQ7Z3D6 616 aa25.34■■□□□ 1.65
RAPGEF1-206ENST00000438647 DRC7Q8IY82 874 aa25.34■■□□□ 1.65
RAPGEF1-206ENST00000438647 STK40Q8N2I9 435 aa25.34■■□□□ 1.65
RAPGEF1-206ENST00000438647 ATP11CQ8NB49 1132 aa25.34■■□□□ 1.65
RAPGEF1-206ENST00000438647 RNF214Q8ND24 703 aa25.34■■□□□ 1.65
RAPGEF1-206ENST00000438647 GANCQ8TET4 914 aa25.34■■□□□ 1.65
RAPGEF1-206ENST00000438647 OR8D1Q8WZ84 308 aa25.34■■□□□ 1.65
RAPGEF1-206ENST00000438647 CCDC114Q96M63 670 aa25.34■■□□□ 1.65
RAPGEF1-206ENST00000438647 RXFP3Q9NSD7 469 aa25.34■■□□□ 1.65
RAPGEF1-206ENST00000438647 FBXL12Q9NXK8 326 aa25.34■■□□□ 1.65
RAPGEF1-206ENST00000438647 METTL12A8MUP2 240 aa25.33■■□□□ 1.65
RAPGEF1-206ENST00000438647 FAM72CH0Y354 149 aa25.33■■□□□ 1.65
RAPGEF1-206ENST00000438647 MID1O15344 667 aa25.33■■□□□ 1.65
RAPGEF1-206ENST00000438647 SNAP91O60641 907 aa25.33■■□□□ 1.65
RAPGEF1-206ENST00000438647 CFIP05156 583 aa25.33■■□□□ 1.65
RAPGEF1-206ENST00000438647 CASP14P31944 242 aa25.33■■□□□ 1.65
RAPGEF1-206ENST00000438647 ACSL1P33121 698 aa25.33■■□□□ 1.65
RAPGEF1-206ENST00000438647 OGDHQ02218 1023 aa25.33■■□□□ 1.65
RAPGEF1-206ENST00000438647 GNA12Q03113 381 aa25.33■■□□□ 1.65
RAPGEF1-206ENST00000438647 STPG1Q5TH74 334 aa25.33■■□□□ 1.65
RAPGEF1-206ENST00000438647 FAM72AQ5TYM5 149 aa25.33■■□□□ 1.65
RAPGEF1-206ENST00000438647 SPECC1LQ69YQ0 1117 aa25.33■■□□□ 1.65
RAPGEF1-206ENST00000438647 FAM72DQ6L9T8 149 aa25.33■■□□□ 1.65
RAPGEF1-206ENST00000438647 RETSATQ6NUM9 610 aa25.33■■□□□ 1.65
RAPGEF1-206ENST00000438647 FAM72BQ86X60 149 aa25.33■■□□□ 1.65
RAPGEF1-206ENST00000438647 OR7D4Q8NG98 312 aa25.33■■□□□ 1.65
RAPGEF1-206ENST00000438647 DNASE2BQ8WZ79 361 aa25.33■■□□□ 1.65
RAPGEF1-206ENST00000438647 FAM129BQ96TA1 746 aa25.33■■□□□ 1.65
RAPGEF1-206ENST00000438647 EPAS1Q99814 870 aa25.33■■□□□ 1.65
RAPGEF1-206ENST00000438647 OMDQ99983 421 aa25.33■■□□□ 1.65
RAPGEF1-206ENST00000438647 NCAPGQ9BPX3 1015 aa25.33■■□□□ 1.65
RAPGEF1-206ENST00000438647 SPON2Q9BUD6 331 aa25.33■■□□□ 1.65
RAPGEF1-206ENST00000438647 ATP13A1Q9HD20 1204 aa25.33■■□□□ 1.65
RAPGEF1-206ENST00000438647 TMEM248Q9NWD8 314 aa25.33■■□□□ 1.65
RAPGEF1-206ENST00000438647 FZD10Q9ULW2 581 aa25.33■■□□□ 1.65
RAPGEF1-206ENST00000438647 SLC6A14Q9UN76 642 aa25.33■■□□□ 1.65
RAPGEF1-206ENST00000438647 FARP1Q9Y4F1 1045 aaPredicted RBP25.33■■□□□ 1.65
RAPGEF1-206ENST00000438647 TMEM191CA6NGB0 347 aa25.32■■□□□ 1.64
RAPGEF1-206ENST00000438647 ALOX15BO15296 676 aa25.32■■□□□ 1.64
RAPGEF1-206ENST00000438647 RNF8O76064 485 aa25.32■■□□□ 1.64
RAPGEF1-206ENST00000438647 SEMA4FO95754 770 aa25.32■■□□□ 1.64
RAPGEF1-206ENST00000438647 IL1BP01584 269 aa25.32■■□□□ 1.64
RAPGEF1-206ENST00000438647 SERPINF2P08697 491 aa25.32■■□□□ 1.64
RAPGEF1-206ENST00000438647 SRCP12931 536 aa25.32■■□□□ 1.64
RAPGEF1-206ENST00000438647 C5AR1P21730 350 aa25.32■■□□□ 1.64
RAPGEF1-206ENST00000438647 SLC8A1P32418 973 aa25.32■■□□□ 1.64
RAPGEF1-206ENST00000438647 PSMD8P48556 350 aa25.32■■□□□ 1.64
RAPGEF1-206ENST00000438647 IRX4P78413 519 aa25.32■■□□□ 1.64
RAPGEF1-206ENST00000438647 SLC20A2Q08357 652 aa25.32■■□□□ 1.64
RAPGEF1-206ENST00000438647 DCAF12L1Q5VU92 463 aa25.32■■□□□ 1.64
RAPGEF1-206ENST00000438647 NLRP14Q86W24 1093 aa25.32■■□□□ 1.64
RAPGEF1-206ENST00000438647 DNAAF5Q86Y56 855 aa25.32■■□□□ 1.64
RAPGEF1-206ENST00000438647 FZD4Q9ULV1 537 aa25.32■■□□□ 1.64
RAPGEF1-206ENST00000438647 CXorf51AA0A1B0GTR3 108 aa25.31■■□□□ 1.64
RAPGEF1-206ENST00000438647 CBX4O00257 560 aa25.31■■□□□ 1.64
RAPGEF1-206ENST00000438647 TPM1P09493 284 aa25.31■■□□□ 1.64
RAPGEF1-206ENST00000438647 VAV1P15498 845 aa25.31■■□□□ 1.64
RAPGEF1-206ENST00000438647 FAM46CQ5VWP2 391 aa25.31■■□□□ 1.64
RAPGEF1-206ENST00000438647 Q6ZVU0 165 aa25.31■■□□□ 1.64
RAPGEF1-206ENST00000438647 TMEM9BQ9NQ34 198 aa25.31■■□□□ 1.64
RAPGEF1-206ENST00000438647 MYO1AQ9UBC5 1043 aa25.31■■□□□ 1.64
RAPGEF1-206ENST00000438647 NEU3Q9UQ49 428 aa25.31■■□□□ 1.64
RAPGEF1-206ENST00000438647 A0A1W2PP55 124 aa25.3■■□□□ 1.64
RAPGEF1-206ENST00000438647 EIF3CLB5ME19 914 aaKnown RBP25.3■■□□□ 1.64
RAPGEF1-206ENST00000438647 MCF2LO15068 1137 aa25.3■■□□□ 1.64
RAPGEF1-206ENST00000438647 RNASEH2AO75792 299 aaKnown RBP25.3■■□□□ 1.64
RAPGEF1-206ENST00000438647 MT-CO1P00395 513 aa25.3■■□□□ 1.64
RAPGEF1-206ENST00000438647 EPHB2P29323 1055 aa25.3■■□□□ 1.64
RAPGEF1-206ENST00000438647 HNRNPH3P31942 346 aaKnown RBP25.3■■□□□ 1.64
RAPGEF1-206ENST00000438647 HTR7P34969 479 aa25.3■■□□□ 1.64
RAPGEF1-206ENST00000438647 GFPT1Q06210 699 aaPredicted RBP25.3■■□□□ 1.64
RAPGEF1-206ENST00000438647 EIF3CQ99613 913 aaKnown RBP25.3■■□□□ 1.64
RAPGEF1-206ENST00000438647 MAGEH1Q9H213 219 aa25.3■■□□□ 1.64
RAPGEF1-206ENST00000438647 CATSPERBQ9H7T0 1116 aa25.3■■□□□ 1.64
RAPGEF1-206ENST00000438647 DONSONQ9NYP3 566 aa25.3■■□□□ 1.64
RAPGEF1-206ENST00000438647 DNAI1Q9UI46 699 aa25.3■■□□□ 1.64
RAPGEF1-206ENST00000438647 PI4KAP42356 2102 aa25.3■■□□□ 1.64
RAPGEF1-206ENST00000438647 C1QTNF3-AMACRE9PGA6 284 aa25.29■■□□□ 1.64
RAPGEF1-206ENST00000438647 CREB3O43889 395 aa25.29■■□□□ 1.64
RAPGEF1-206ENST00000438647 RAMP2O60895 175 aa25.29■■□□□ 1.64
RAPGEF1-206ENST00000438647 MAOBP27338 520 aa25.29■■□□□ 1.64
RAPGEF1-206ENST00000438647 GEMIN4P57678 1058 aaKnown RBP25.29■■□□□ 1.64
RAPGEF1-206ENST00000438647 TSR1Q2NL82 804 aaKnown RBP25.29■■□□□ 1.64
RAPGEF1-206ENST00000438647 LINGO4Q6UY18 593 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms