RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 ZBTB1Q9Y2K1 713 aa3.5□□□□□ -1.85
HMGB1P31-201ENST00000437242 SRPRBQ9Y5M8 271 aaKnown RBP3.5□□□□□ -1.85
HMGB1P31-201ENST00000437242 NESP48681 1621 aa3.5□□□□□ -1.85
HMGB1P31-201ENST00000437242 THOC2Q8NI27 1593 aaKnown RBP3.5□□□□□ -1.85
HMGB1P31-201ENST00000437242 CYP3A7-CYP3A51PA0A087WV96 503 aa3.49□□□□□ -1.85
HMGB1P31-201ENST00000437242 KRTAP9-6A8MVA2 160 aa3.49□□□□□ -1.85
HMGB1P31-201ENST00000437242 PCDH17O14917 1159 aa3.49□□□□□ -1.85
HMGB1P31-201ENST00000437242 LDB2O43679 373 aa3.49□□□□□ -1.85
HMGB1P31-201ENST00000437242 CAND2O75155 1236 aa3.49□□□□□ -1.85
HMGB1P31-201ENST00000437242 CYP3A4P08684 503 aa3.49□□□□□ -1.85
HMGB1P31-201ENST00000437242 NAGAP17050 411 aa3.49□□□□□ -1.85
HMGB1P31-201ENST00000437242 GNLYP22749 145 aa3.49□□□□□ -1.85
HMGB1P31-201ENST00000437242 CYP3A7P24462 503 aa3.49□□□□□ -1.85
HMGB1P31-201ENST00000437242 GNALP38405 381 aa3.49□□□□□ -1.85
HMGB1P31-201ENST00000437242 CYP2J2P51589 502 aa3.49□□□□□ -1.85
HMGB1P31-201ENST00000437242 FOXL2P58012 376 aa3.49□□□□□ -1.85
HMGB1P31-201ENST00000437242 RHAGQ02094 409 aa3.49□□□□□ -1.85
HMGB1P31-201ENST00000437242 GRSF1Q12849 480 aaKnown RBP eCLIP3.49□□□□□ -1.85
HMGB1P31-201ENST00000437242 TRAF3Q13114 568 aa3.49□□□□□ -1.85
HMGB1P31-201ENST00000437242 CEP85LQ5SZL2 805 aa3.49□□□□□ -1.85
HMGB1P31-201ENST00000437242 MEX3BQ6ZN04 569 aaKnown RBP3.49□□□□□ -1.85
HMGB1P31-201ENST00000437242 TRABD2AQ86V40 505 aa3.49□□□□□ -1.85
HMGB1P31-201ENST00000437242 TMEM217Q8N7C4 229 aa3.49□□□□□ -1.85
HMGB1P31-201ENST00000437242 MIGA1Q8NAN2 632 aa3.49□□□□□ -1.85
HMGB1P31-201ENST00000437242 TTC17Q96AE7 1141 aa3.49□□□□□ -1.85
HMGB1P31-201ENST00000437242 ZNF333Q96JL9 665 aa3.49□□□□□ -1.85
HMGB1P31-201ENST00000437242 ADGRG7Q96K78 797 aa3.49□□□□□ -1.85
HMGB1P31-201ENST00000437242 PKP4Q99569 1192 aa3.49□□□□□ -1.85
HMGB1P31-201ENST00000437242 FRMD8Q9BZ67 464 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P31-201ENST00000437242 EPS8L2Q9H6S3 715 aa3.49□□□□□ -1.85
HMGB1P31-201ENST00000437242 ARL15Q9NXU5 204 aa3.49□□□□□ -1.85
HMGB1P31-201ENST00000437242 DONSONQ9NYP3 566 aa3.49□□□□□ -1.85
HMGB1P31-201ENST00000437242 TBC1D3DA0A087WVF3 549 aa3.48□□□□□ -1.85
HMGB1P31-201ENST00000437242 TBC1D3IA0A087WXS9 549 aa3.48□□□□□ -1.85
HMGB1P31-201ENST00000437242 TBC1D3EA0A087X179 549 aa3.48□□□□□ -1.85
HMGB1P31-201ENST00000437242 TBC1D3KA0A087X1G2 549 aa3.48□□□□□ -1.85
HMGB1P31-201ENST00000437242 TBC1D3BA6NDS4 549 aa3.48□□□□□ -1.85
HMGB1P31-201ENST00000437242 TBC1D3FA6NER0 549 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P31-201ENST00000437242 TBC1D3LB9A6J9 549 aa3.48□□□□□ -1.85
HMGB1P31-201ENST00000437242 BMPR1BO00238 502 aa3.48□□□□□ -1.85
HMGB1P31-201ENST00000437242 SERPINI2O75830 405 aa3.48□□□□□ -1.85
HMGB1P31-201ENST00000437242 GLP2RO95838 553 aa3.48□□□□□ -1.85
HMGB1P31-201ENST00000437242 TBC1D3HP0C7X1 549 aa3.48□□□□□ -1.85
HMGB1P31-201ENST00000437242 PRIM2P49643 509 aa3.48□□□□□ -1.85
HMGB1P31-201ENST00000437242 KRTAP10-12P60413 245 aa3.48□□□□□ -1.85
HMGB1P31-201ENST00000437242 RNASELQ05823 741 aaKnown RBP3.48□□□□□ -1.85
HMGB1P31-201ENST00000437242 PMS2P11Q13670 270 aa3.48□□□□□ -1.85
HMGB1P31-201ENST00000437242 RBM39Q14498 530 aaKnown RBP3.48□□□□□ -1.85
HMGB1P31-201ENST00000437242 GRM4Q14833 912 aa3.48□□□□□ -1.85
HMGB1P31-201ENST00000437242 ARL13BQ3SXY8 428 aa3.48□□□□□ -1.85
HMGB1P31-201ENST00000437242 KRT71Q3SY84 523 aa3.48□□□□□ -1.85
HMGB1P31-201ENST00000437242 TBC1D3GQ6DHY5 549 aa3.48□□□□□ -1.85
HMGB1P31-201ENST00000437242 TBC1D3CQ6IPX1 549 aa3.48□□□□□ -1.85
HMGB1P31-201ENST00000437242 TBC1D3Q8IZP1 549 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P31-201ENST00000437242 LILRB1Q8NHL6 650 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P31-201ENST00000437242 SLC35F5Q8WV83 523 aa3.48□□□□□ -1.85
HMGB1P31-201ENST00000437242 WDR60Q8WVS4 1066 aa3.48□□□□□ -1.85
HMGB1P31-201ENST00000437242 EPYCQ99645 322 aa3.48□□□□□ -1.85
HMGB1P31-201ENST00000437242 GDF15Q99988 308 aa3.48□□□□□ -1.85
HMGB1P31-201ENST00000437242 IL25Q9H293 177 aa3.48□□□□□ -1.85
HMGB1P31-201ENST00000437242 HIPK3Q9H422 1215 aa3.48□□□□□ -1.85
HMGB1P31-201ENST00000437242 CCDC134Q9H6E4 229 aa3.48□□□□□ -1.85
HMGB1P31-201ENST00000437242 SDF2L1Q9HCN8 221 aa3.48□□□□□ -1.85
HMGB1P31-201ENST00000437242 NFU1Q9UMS0 254 aa3.48□□□□□ -1.85
HMGB1P31-201ENST00000437242 COPG1Q9Y678 874 aaKnown RBP3.48□□□□□ -1.85
HMGB1P31-201ENST00000437242 MYO15BQ96JP2 1530 aa3.48□□□□□ -1.85
HMGB1P31-201ENST00000437242 KIF21AQ7Z4S6 1674 aa3.47□□□□□ -1.85
HMGB1P31-201ENST00000437242 CCDC194A0A1B0GVG4 234 aa3.47□□□□□ -1.85
HMGB1P31-201ENST00000437242 TCRBV7S3A2A0A539 114 aa3.47□□□□□ -1.85
HMGB1P31-201ENST00000437242 RPP40O75818 363 aaKnown RBP3.47□□□□□ -1.85
HMGB1P31-201ENST00000437242 SOX30O94993 753 aa3.47□□□□□ -1.85
HMGB1P31-201ENST00000437242 NTSR2O95665 410 aa3.47□□□□□ -1.85
HMGB1P31-201ENST00000437242 SERPINB2P05120 415 aa3.47□□□□□ -1.85
HMGB1P31-201ENST00000437242 KRT18P05783 430 aaKnown RBP3.47□□□□□ -1.85
HMGB1P31-201ENST00000437242 MYZAPP0CAP1 466 aa3.47□□□□□ -1.85
HMGB1P31-201ENST00000437242 HARSP12081 509 aaKnown RBP3.47□□□□□ -1.85
HMGB1P31-201ENST00000437242 UNGP13051 313 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P31-201ENST00000437242 C21orf33P30042 268 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P31-201ENST00000437242 THPOP40225 353 aa3.47□□□□□ -1.85
HMGB1P31-201ENST00000437242 CDH12P55289 794 aa3.47□□□□□ -1.85
HMGB1P31-201ENST00000437242 ZBTB16Q05516 673 aa3.47□□□□□ -1.85
HMGB1P31-201ENST00000437242 SNTA1Q13424 505 aa3.47□□□□□ -1.85
HMGB1P31-201ENST00000437242 EFHC1Q5JVL4 640 aa3.47□□□□□ -1.85
HMGB1P31-201ENST00000437242 FAM171A1Q5VUB5 890 aa3.47□□□□□ -1.85
HMGB1P31-201ENST00000437242 ARL6IP4Q66PJ3 421 aaKnown RBP3.47□□□□□ -1.85
HMGB1P31-201ENST00000437242 RETSATQ6NUM9 610 aa3.47□□□□□ -1.85
HMGB1P31-201ENST00000437242 SLC30A9Q6PML9 568 aa3.47□□□□□ -1.85
HMGB1P31-201ENST00000437242 CCAR1Q8IX12 1150 aaKnown RBP3.47□□□□□ -1.85
HMGB1P31-201ENST00000437242 CEP76Q8TAP6 659 aa3.47□□□□□ -1.85
HMGB1P31-201ENST00000437242 FAM110DQ8TAY7 271 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P31-201ENST00000437242 TIFAQ96CG3 184 aa3.47□□□□□ -1.85
HMGB1P31-201ENST00000437242 GFM1Q96RP9 751 aaKnown RBP3.47□□□□□ -1.85
HMGB1P31-201ENST00000437242 SORBS1Q9BX66 1292 aaKnown RBP3.47□□□□□ -1.85
HMGB1P31-201ENST00000437242 STARD7Q9NQZ5 370 aa3.47□□□□□ -1.85
HMGB1P31-201ENST00000437242 SLC52A1Q9NWF4 448 aa3.47□□□□□ -1.85
HMGB1P31-201ENST00000437242 ZDHHC7Q9NXF8 308 aa3.47□□□□□ -1.85
HMGB1P31-201ENST00000437242 PKP3Q9Y446 797 aa3.47□□□□□ -1.85
HMGB1P31-201ENST00000437242 RAI2Q9Y5P3 530 aa3.47□□□□□ -1.85
HMGB1P31-201ENST00000437242 IGHV4-28A0A0C4DH34 117 aa3.46□□□□□ -1.86
HMGB1P31-201ENST00000437242 PLIN1O60240 522 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 264.8 ms