RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 TBC1D3KA0A087X1G2 549 aa11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 GTPBP10A4D1E9 387 aaKnown RBP11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 TBC1D3FA6NER0 549 aaPredicted RBP11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 TBC1D3LB9A6J9 549 aa11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 TLX3O43711 291 aaPredicted RBP11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 MAGEC1O60732 1142 aa11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 ERBB2P04626 1255 aa11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 CTSLP07711 333 aa11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 TBC1D3HP0C7X1 549 aa11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 JUPP14923 745 aa11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 ACP1P24666 158 aa11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 ABCG1P45844 678 aa11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 NUCB2P80303 420 aa11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 APBA1Q02410 837 aa11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 BNIP3Q12983 259 aa11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 TARDBPQ13148 414 aaKnown RBP eCLIP11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 PTPN20Q4JDL3 420 aa11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 SETMARQ53H47 684 aaPredicted RBP11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 FAM46CQ5VWP2 391 aa11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 TBC1D3GQ6DHY5 549 aa11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 TBC1D3CQ6IPX1 549 aa11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 FAM183BPQ6ZVS7 135 aa11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 PRPF39Q86UA1 669 aaKnown RBP11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 TBC1D3Q8IZP1 549 aaPredicted RBP11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 C1orf131Q8NDD1 294 aaKnown RBP11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 ZNF397Q8NF99 534 aaPredicted RBP11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 PPP1R13BQ96KQ4 1090 aa11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 PSMB7Q99436 277 aa11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 SRRTQ9BXP5 876 aaKnown RBP11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 GPR27Q9NS67 375 aa11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 ARHGEF38Q9NXL2 777 aa11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 SLC12A6Q9UHW9 1150 aa11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 VANGL2Q9ULK5 521 aa11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 HS3ST4Q9Y661 456 aa11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 KNTC1P50748 2209 aa11.25□□□□□ -0.61
SPTLC1P4-201ENST00000435997 C1QTNF3-AMACRE9PGA6 284 aa11.24□□□□□ -0.61
SPTLC1P4-201ENST00000435997 PRAMEF26H0Y7S4 382 aa11.24□□□□□ -0.61
SPTLC1P4-201ENST00000435997 TRIM38O00635 465 aa11.24□□□□□ -0.61
SPTLC1P4-201ENST00000435997 RNGTTO60942 597 aaKnown RBP11.24□□□□□ -0.61
SPTLC1P4-201ENST00000435997 PAGE1O75459 146 aa11.24□□□□□ -0.61
SPTLC1P4-201ENST00000435997 CLDN11O75508 207 aa11.24□□□□□ -0.61
SPTLC1P4-201ENST00000435997 GRAP2O75791 330 aa11.24□□□□□ -0.61
SPTLC1P4-201ENST00000435997 SRCP12931 536 aa11.24□□□□□ -0.61
SPTLC1P4-201ENST00000435997 CKMT2P17540 419 aa11.24□□□□□ -0.61
SPTLC1P4-201ENST00000435997 MAT2AP31153 395 aaKnown RBP11.24□□□□□ -0.61
SPTLC1P4-201ENST00000435997 GGCXP38435 758 aa11.24□□□□□ -0.61
SPTLC1P4-201ENST00000435997 EIF2S3P41091 472 aaKnown RBP11.24□□□□□ -0.61
SPTLC1P4-201ENST00000435997 CDH4P55283 916 aa11.24□□□□□ -0.61
SPTLC1P4-201ENST00000435997 DLG2Q15700 870 aa11.24□□□□□ -0.61
SPTLC1P4-201ENST00000435997 EFHC1Q5JVL4 640 aa11.24□□□□□ -0.61
SPTLC1P4-201ENST00000435997 NEK5Q6P3R8 708 aa11.24□□□□□ -0.61
SPTLC1P4-201ENST00000435997 C11orf57Q6ZUT1 292 aaPredicted RBP11.24□□□□□ -0.61
SPTLC1P4-201ENST00000435997 C14orf80Q86SX3 495 aa11.24□□□□□ -0.61
SPTLC1P4-201ENST00000435997 PASD1Q8IV76 773 aa11.24□□□□□ -0.61
SPTLC1P4-201ENST00000435997 DCBLD1Q8N8Z6 715 aa11.24□□□□□ -0.61
SPTLC1P4-201ENST00000435997 DCAF4L2Q8NA75 395 aa11.24□□□□□ -0.61
SPTLC1P4-201ENST00000435997 OR2A12Q8NGT7 310 aa11.24□□□□□ -0.61
SPTLC1P4-201ENST00000435997 PIP4K2CQ8TBX8 421 aa11.24□□□□□ -0.61
SPTLC1P4-201ENST00000435997 NT5C3BQ969T7 300 aa11.24□□□□□ -0.61
SPTLC1P4-201ENST00000435997 PPP1R9BQ96SB3 815 aa11.24□□□□□ -0.61
SPTLC1P4-201ENST00000435997 PRORYQ9H606 182 aa11.24□□□□□ -0.61
SPTLC1P4-201ENST00000435997 SIX2Q9NPC8 291 aa11.24□□□□□ -0.61
SPTLC1P4-201ENST00000435997 ZNF212Q9UDV6 495 aa11.24□□□□□ -0.61
SPTLC1P4-201ENST00000435997 SLC25A13Q9UJS0 675 aa11.24□□□□□ -0.61
SPTLC1P4-201ENST00000435997 VPS28Q9UK41 221 aa11.24□□□□□ -0.61
SPTLC1P4-201ENST00000435997 AJAP1Q9UKB5 411 aaPredicted RBP11.24□□□□□ -0.61
SPTLC1P4-201ENST00000435997 CA5BQ9Y2D0 317 aa11.24□□□□□ -0.61
SPTLC1P4-201ENST00000435997 ARID1BQ8NFD5 2236 aaPredicted RBP11.23□□□□□ -0.61
SPTLC1P4-201ENST00000435997 ASXL3Q9C0F0 2248 aa11.23□□□□□ -0.61
SPTLC1P4-201ENST00000435997 PTPRQQ9UMZ3 2332 aa11.23□□□□□ -0.61
SPTLC1P4-201ENST00000435997 IGLV3-10A0A075B6K4 115 aa11.23□□□□□ -0.61
SPTLC1P4-201ENST00000435997 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.23□□□□□ -0.61
SPTLC1P4-201ENST00000435997 RNF103O00237 685 aa11.23□□□□□ -0.61
SPTLC1P4-201ENST00000435997 BIN1O00499 593 aa11.23□□□□□ -0.61
SPTLC1P4-201ENST00000435997 SDC3O75056 442 aa11.23□□□□□ -0.61
SPTLC1P4-201ENST00000435997 MT-CO1P00395 513 aa11.23□□□□□ -0.61
SPTLC1P4-201ENST00000435997 GIMD1P0DJR0 217 aa11.23□□□□□ -0.61
SPTLC1P4-201ENST00000435997 TFE3P19532 575 aaPredicted RBP11.23□□□□□ -0.61
SPTLC1P4-201ENST00000435997 SLC9A1P19634 815 aa11.23□□□□□ -0.61
SPTLC1P4-201ENST00000435997 PON1P27169 355 aa11.23□□□□□ -0.61
SPTLC1P4-201ENST00000435997 ITPKBP27987 946 aa11.23□□□□□ -0.61
SPTLC1P4-201ENST00000435997 CDH5P33151 784 aaPredicted RBP11.23□□□□□ -0.61
SPTLC1P4-201ENST00000435997 NOS2P35228 1153 aa11.23□□□□□ -0.61
SPTLC1P4-201ENST00000435997 CXCR3P49682 368 aa11.23□□□□□ -0.61
SPTLC1P4-201ENST00000435997 INSM1Q01101 510 aaPredicted RBP11.23□□□□□ -0.61
SPTLC1P4-201ENST00000435997 ZNF177Q13360 481 aaPredicted RBP11.23□□□□□ -0.61
SPTLC1P4-201ENST00000435997 ZNF211Q13398 564 aaPredicted RBP11.23□□□□□ -0.61
SPTLC1P4-201ENST00000435997 ZNF284Q2VY69 593 aa11.23□□□□□ -0.61
SPTLC1P4-201ENST00000435997 POM121L1PQ3SYA9 428 aa11.23□□□□□ -0.61
SPTLC1P4-201ENST00000435997 ALFQ53S48 1182 aa11.23□□□□□ -0.61
SPTLC1P4-201ENST00000435997 BNIPLQ7Z465 357 aa11.23□□□□□ -0.61
SPTLC1P4-201ENST00000435997 IRF2BP1Q8IU81 584 aa11.23□□□□□ -0.61
SPTLC1P4-201ENST00000435997 SLC22A18ASQ8N1D0 253 aa11.23□□□□□ -0.61
SPTLC1P4-201ENST00000435997 SLC25A45Q8N413 288 aa11.23□□□□□ -0.61
SPTLC1P4-201ENST00000435997 PGAP3Q96FM1 320 aaPredicted RBP11.23□□□□□ -0.61
SPTLC1P4-201ENST00000435997 UBL7Q96S82 380 aaPredicted RBP11.23□□□□□ -0.61
SPTLC1P4-201ENST00000435997 NPY6RQ99463 290 aa11.23□□□□□ -0.61
SPTLC1P4-201ENST00000435997 CRACR2AQ9BSW2 395 aa11.23□□□□□ -0.61
SPTLC1P4-201ENST00000435997 PIGVQ9NUD9 493 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms