RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 CD209Q9NNX6 404 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 DKK3Q9UBP4 350 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 GGA1Q9UJY5 639 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 UBR2Q8IWV8 1755 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 GOLGB1Q14789 3259 aaKnown RBP7.59□□□□□ -1.19
CPSF6-202ENST00000435070 TAF1LQ8IZX4 1826 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 OCA2Q04671 838 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 TDRD10Q5VZ19 366 aaKnown RBP7.59□□□□□ -1.19
CPSF6-202ENST00000435070 FAM219BQ5XKK7 198 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 HMBOX1Q6NT76 420 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.59□□□□□ -1.19
CPSF6-202ENST00000435070 CALML6Q8TD86 181 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 PI4KBQ9UBF8 816 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 CARD8Q9Y2G2 431 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 DAGLAQ9Y4D2 1042 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 ARAP2Q8WZ64 1704 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 CCDC78A2IDD5 438 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 PRKCHP24723 683 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 CDK18Q07002 472 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 ITKQ08881 620 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 ZNF677Q86XU0 584 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 CPXCR1Q8N123 301 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 CCNYL1Q8N7R7 359 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 TRPC4APQ8TEL6 797 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.59□□□□□ -1.19
CPSF6-202ENST00000435070 EGFL7Q9UHF1 273 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 CNOT6Q9ULM6 557 aaKnown RBP7.59□□□□□ -1.19
CPSF6-202ENST00000435070 AURKAO14965 403 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 APBA3O96018 575 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 ERVK-10P10266 1014 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 HSPA8P11142 646 aaKnown RBP7.59□□□□□ -1.19
CPSF6-202ENST00000435070 NPTX2P47972 431 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 NFIAQ12857 509 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 SLC13A2Q13183 592 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 NHSL2Q5HYW2 709 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 PIGZQ86VD9 579 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 LDHDQ86WU2 507 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 GLT1D1Q96MS3 346 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 IL12RB2Q99665 862 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 CTRCQ99895 268 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 ZBED2Q9BTP6 218 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 C1orf50Q9BV19 199 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 CEP41Q9BYV8 373 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 DHX33Q9H6R0 707 aaKnown RBP7.59□□□□□ -1.19
CPSF6-202ENST00000435070 CCDC167Q9P0B6 97 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 CDH7Q9ULB5 785 aa7.59□□□□□ -1.19
CPSF6-202ENST00000435070 PTPRJQ12913 1337 aa7.59□□□□□ -1.2
CPSF6-202ENST00000435070 C3orf70A6NLC5 250 aaPredicted RBP7.58□□□□□ -1.2
CPSF6-202ENST00000435070 TMEM114B3SHH9 223 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 TMEM233B4DJY2 109 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 APOC4-APOC2K7ER74 178 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 TRIM38O00635 465 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 CLPXO76031 633 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 PIGNO95427 931 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 APOC2P02655 101 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 PTPN9P43378 593 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 FPGSQ05932 587 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 PIGFQ07326 219 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 ENOSF1Q7L5Y1 443 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 ABHD11Q8NFV4 315 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 RP9Q8TA86 221 aaKnown RBP7.58□□□□□ -1.2
CPSF6-202ENST00000435070 SGCDQ92629 289 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 TFAP2CQ92754 450 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 GATA5Q9BWX5 397 aaPredicted RBP7.58□□□□□ -1.2
CPSF6-202ENST00000435070 ANKRD60Q9BZ19 345 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 ADNPQ9H2P0 1102 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 ITM2BQ9Y287 266 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 MICAL3Q7RTP6 2002 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 TAF4O00268 1085 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 RAD17O75943 681 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 KRT7P08729 469 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 MIPP30301 263 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 PRKAA2P54646 552 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 NAGLUP54802 743 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 GTF2BQ00403 316 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 DPYSQ14117 519 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 TRIM25Q14258 630 aaKnown RBP7.58□□□□□ -1.2
CPSF6-202ENST00000435070 PRPSAP1Q14558 356 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 OXA1LQ15070 435 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 IFNEQ86WN2 208 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 SPNS2Q8IVW8 549 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 TMEM35BQ8NCS4 154 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 EFHD1Q9BUP0 239 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 ITM2CQ9NQX7 267 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 TRAF6Q9Y4K3 522 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 IGKV6D-41A0A0C4DH26 115 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.58□□□□□ -1.2
CPSF6-202ENST00000435070 METTL18O95568 372 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 ACO1P21399 889 aaKnown RBP7.58□□□□□ -1.2
CPSF6-202ENST00000435070 NOVP48745 357 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 PAGE2BQ5JRK9 111 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 LRRC38Q5VT99 294 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 SEL1L3Q68CR1 1132 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 SLC39A4Q6P5W5 647 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 NIM1KQ8IY84 436 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 SLCO4A1Q96BD0 722 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 FAM193BQ96PV7 902 aaPredicted RBP7.58□□□□□ -1.2
CPSF6-202ENST00000435070 WDR11Q9BZH6 1224 aa7.58□□□□□ -1.2
CPSF6-202ENST00000435070 ILKAPQ9H0C8 392 aaPredicted RBP7.58□□□□□ -1.2
CPSF6-202ENST00000435070 RAD21L1Q9H4I0 556 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms