RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 XRCC1P18887 633 aaPredicted RBP15.31■□□□□ 0.04
LINC00839-202ENST00000429940 EPHA3P29320 983 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 GRM5P41594 1212 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 RPL5P46777 297 aaKnown RBP15.31■□□□□ 0.04
LINC00839-202ENST00000429940 CYLC2Q14093 348 aaPredicted RBP15.31■□□□□ 0.04
LINC00839-202ENST00000429940 ADGRE1Q14246 886 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 ZNF423Q2M1K9 1284 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 LSM12Q3MHD2 195 aaKnown RBP15.31■□□□□ 0.04
LINC00839-202ENST00000429940 SLC25A52Q3SY17 297 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 SEL1L3Q68CR1 1132 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 ZFP1Q6P2D0 407 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 RBM44Q6ZP01 1051 aaKnown RBP15.31■□□□□ 0.04
LINC00839-202ENST00000429940 TMEM135Q86UB9 458 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 RASAL3Q86YV0 1011 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 FAM149B1Q96BN6 582 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 MOCOSQ96EN8 888 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 ZMAT2Q96NC0 199 aaKnown RBP15.31■□□□□ 0.04
LINC00839-202ENST00000429940 ACSS2Q9NR19 701 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 PDGFCQ9NRA1 345 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 BFARQ9NZS9 450 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 LZTS1Q9Y250 596 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 RAP2CQ9Y3L5 183 aa15.31■□□□□ 0.04
LINC00839-202ENST00000429940 ZCWPW2A0A1B0GU75 182 aa15.3■□□□□ 0.04
LINC00839-202ENST00000429940 HDAC3O15379 428 aa15.3■□□□□ 0.04
LINC00839-202ENST00000429940 MSX2P35548 267 aaPredicted RBP15.3■□□□□ 0.04
LINC00839-202ENST00000429940 ACADSBP45954 432 aa15.3■□□□□ 0.04
LINC00839-202ENST00000429940 RPL14P50914 215 aaKnown RBP15.3■□□□□ 0.04
LINC00839-202ENST00000429940 PIGGQ5H8A4 983 aa15.3■□□□□ 0.04
LINC00839-202ENST00000429940 TMEM126BQ8IUX1 230 aa15.3■□□□□ 0.04
LINC00839-202ENST00000429940 PSTKQ8IV42 348 aaKnown RBP15.3■□□□□ 0.04
LINC00839-202ENST00000429940 TP53INP2Q8IXH6 220 aa15.3■□□□□ 0.04
LINC00839-202ENST00000429940 LINC01465Q8N7H1 131 aa15.3■□□□□ 0.04
LINC00839-202ENST00000429940 CATSPER1Q8NEC5 780 aa15.3■□□□□ 0.04
LINC00839-202ENST00000429940 NDRG1Q92597 394 aaKnown RBP15.3■□□□□ 0.04
LINC00839-202ENST00000429940 RCN3Q96D15 328 aa15.3■□□□□ 0.04
LINC00839-202ENST00000429940 HIC2Q96JB3 615 aa15.3■□□□□ 0.04
LINC00839-202ENST00000429940 CNBD2Q96M20 576 aa15.3■□□□□ 0.04
LINC00839-202ENST00000429940 COPS7BQ9H9Q2 264 aaPredicted RBP15.3■□□□□ 0.04
LINC00839-202ENST00000429940 PTTG2Q9NZH5 202 aa15.3■□□□□ 0.04
LINC00839-202ENST00000429940 ATXN10Q9UBB4 475 aa15.3■□□□□ 0.04
LINC00839-202ENST00000429940 BCAP29Q9UHQ4 241 aa15.3■□□□□ 0.04
LINC00839-202ENST00000429940 PCDHGB4Q9UN71 923 aa15.3■□□□□ 0.04
LINC00839-202ENST00000429940 MAGED2Q9UNF1 606 aaPredicted RBP15.3■□□□□ 0.04
LINC00839-202ENST00000429940 PCDHGB5Q9Y5G0 923 aa15.3■□□□□ 0.04
LINC00839-202ENST00000429940 AP4B1Q9Y6B7 739 aa15.3■□□□□ 0.04
LINC00839-202ENST00000429940 UNCXA6NJT0 531 aa15.29■□□□□ 0.04
LINC00839-202ENST00000429940 PDLIM1O00151 329 aa15.29■□□□□ 0.04
LINC00839-202ENST00000429940 CFLARO15519 480 aa15.29■□□□□ 0.04
LINC00839-202ENST00000429940 TIMM44O43615 452 aa15.29■□□□□ 0.04
LINC00839-202ENST00000429940 AP2A1O95782 977 aa15.29■□□□□ 0.04
LINC00839-202ENST00000429940 AMHP03971 560 aa15.29■□□□□ 0.04
LINC00839-202ENST00000429940 TFAP2AP05549 437 aa15.29■□□□□ 0.04
LINC00839-202ENST00000429940 PPARGP37231 505 aaPredicted RBP15.29■□□□□ 0.04
LINC00839-202ENST00000429940 RPL34P49207 117 aaKnown RBP15.29■□□□□ 0.04
LINC00839-202ENST00000429940 PKNOX1P55347 436 aa15.29■□□□□ 0.04
LINC00839-202ENST00000429940 PAFAH1B3Q15102 231 aaKnown RBP15.29■□□□□ 0.04
LINC00839-202ENST00000429940 DCAF6Q58WW2 860 aa15.29■□□□□ 0.04
LINC00839-202ENST00000429940 ACVR1CQ8NER5 493 aa15.29■□□□□ 0.04
LINC00839-202ENST00000429940 BHLHE22Q8NFJ8 381 aaPredicted RBP15.29■□□□□ 0.04
LINC00839-202ENST00000429940 C18orf25Q96B23 403 aaPredicted RBP15.29■□□□□ 0.04
LINC00839-202ENST00000429940 ACE2Q9BYF1 805 aaPredicted RBP15.29■□□□□ 0.04
LINC00839-202ENST00000429940 DRC3Q9H069 523 aa15.29■□□□□ 0.04
LINC00839-202ENST00000429940 TASP1Q9H6P5 420 aa15.29■□□□□ 0.04
LINC00839-202ENST00000429940 RIMS3Q9UJD0 308 aa15.29■□□□□ 0.04
LINC00839-202ENST00000429940 MID2Q9UJV3 735 aa15.29■□□□□ 0.04
LINC00839-202ENST00000429940 VPS28Q9UK41 221 aa15.29■□□□□ 0.04
LINC00839-202ENST00000429940 ZNF638Q14966 1978 aaKnown RBP15.29■□□□□ 0.04
LINC00839-202ENST00000429940 HTTP42858 3142 aa15.29■□□□□ 0.04
LINC00839-202ENST00000429940 VILLO15195 856 aa15.29■□□□□ 0.04
LINC00839-202ENST00000429940 SRGAP2BP0DMP2 458 aa15.29■□□□□ 0.04
LINC00839-202ENST00000429940 ENO3P13929 434 aaPredicted RBP15.29■□□□□ 0.04
LINC00839-202ENST00000429940 CCR10P46092 362 aa15.29■□□□□ 0.04
LINC00839-202ENST00000429940 GRIA4P48058 902 aa15.29■□□□□ 0.04
LINC00839-202ENST00000429940 PITX1P78337 314 aaPredicted RBP15.29■□□□□ 0.04
LINC00839-202ENST00000429940 MPP3Q13368 585 aa15.29■□□□□ 0.04
LINC00839-202ENST00000429940 RGMBQ6NW40 437 aa15.29■□□□□ 0.04
LINC00839-202ENST00000429940 SETD3Q86TU7 594 aaPredicted RBP15.29■□□□□ 0.04
LINC00839-202ENST00000429940 KCNMB4Q86W47 210 aa15.29■□□□□ 0.04
LINC00839-202ENST00000429940 LRRC52Q8N7C0 313 aa15.29■□□□□ 0.04
LINC00839-202ENST00000429940 ADAM32Q8TC27 787 aa15.29■□□□□ 0.04
LINC00839-202ENST00000429940 SLC2A14Q8TDB8 520 aa15.29■□□□□ 0.04
LINC00839-202ENST00000429940 USP13Q92995 863 aaPredicted RBP15.29■□□□□ 0.04
LINC00839-202ENST00000429940 MFSD3Q96ES6 412 aa15.29■□□□□ 0.04
LINC00839-202ENST00000429940 MRPS26Q9BYN8 205 aaKnown RBP15.29■□□□□ 0.04
LINC00839-202ENST00000429940 NUF2Q9BZD4 464 aa15.29■□□□□ 0.04
LINC00839-202ENST00000429940 C20orf96Q9NUD7 363 aaPredicted RBP15.29■□□□□ 0.04
LINC00839-202ENST00000429940 SNTG2Q9NY99 539 aa15.29■□□□□ 0.04
LINC00839-202ENST00000429940 APPL1Q9UKG1 709 aa15.29■□□□□ 0.04
LINC00839-202ENST00000429940 HES2Q9Y543 173 aa15.29■□□□□ 0.04
LINC00839-202ENST00000429940 CCDC160A6NGH7 325 aa15.28■□□□□ 0.04
LINC00839-202ENST00000429940 TK2O00142 265 aa15.28■□□□□ 0.04
LINC00839-202ENST00000429940 TNFAIP8O95379 198 aa15.28■□□□□ 0.04
LINC00839-202ENST00000429940 PIGNO95427 931 aa15.28■□□□□ 0.04
LINC00839-202ENST00000429940 LGALS2P05162 132 aa15.28■□□□□ 0.04
LINC00839-202ENST00000429940 APOA4P06727 396 aa15.28■□□□□ 0.04
LINC00839-202ENST00000429940 LMO2P25791 158 aa15.28■□□□□ 0.04
LINC00839-202ENST00000429940 PTPN3P26045 913 aa15.28■□□□□ 0.04
LINC00839-202ENST00000429940 HK2P52789 917 aa15.28■□□□□ 0.04
LINC00839-202ENST00000429940 CEACAM7Q14002 265 aa15.28■□□□□ 0.04
LINC00839-202ENST00000429940 FRG1Q14331 258 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms