RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 SLC25A13Q9UJS0 675 aa13.41□□□□□ -0.26
DEPDC7-203ENST00000427755 VPS28Q9UK41 221 aa13.41□□□□□ -0.26
DEPDC7-203ENST00000427755 HS3ST2Q9Y278 367 aa13.41□□□□□ -0.26
DEPDC7-203ENST00000427755 PCDHGA1Q9Y5H4 931 aa13.41□□□□□ -0.26
DEPDC7-203ENST00000427755 LAMA5O15230 3695 aa13.41□□□□□ -0.26
DEPDC7-203ENST00000427755 PLXNB3Q9ULL4 1909 aa13.41□□□□□ -0.26
DEPDC7-203ENST00000427755 ENC1O14682 589 aa13.4□□□□□ -0.26
DEPDC7-203ENST00000427755 ALOX15BO15296 676 aa13.4□□□□□ -0.26
DEPDC7-203ENST00000427755 YKT6O15498 198 aa13.4□□□□□ -0.26
DEPDC7-203ENST00000427755 SNAP91O60641 907 aa13.4□□□□□ -0.26
DEPDC7-203ENST00000427755 MT-CO1P00395 513 aa13.4□□□□□ -0.26
DEPDC7-203ENST00000427755 CTSLP07711 333 aa13.4□□□□□ -0.26
DEPDC7-203ENST00000427755 MAT2AP31153 395 aaKnown RBP13.4□□□□□ -0.26
DEPDC7-203ENST00000427755 GABRB2P47870 512 aa13.4□□□□□ -0.26
DEPDC7-203ENST00000427755 TAS2R38P59533 333 aa13.4□□□□□ -0.26
DEPDC7-203ENST00000427755 CYP4F3Q08477 520 aa13.4□□□□□ -0.26
DEPDC7-203ENST00000427755 CNTN1Q12860 1018 aa13.4□□□□□ -0.26
DEPDC7-203ENST00000427755 BNIP3Q12983 259 aa13.4□□□□□ -0.26
DEPDC7-203ENST00000427755 DNAJC3Q13217 504 aa13.4□□□□□ -0.26
DEPDC7-203ENST00000427755 MAN2A1Q16706 1144 aa13.4□□□□□ -0.26
DEPDC7-203ENST00000427755 POM121L1PQ3SYA9 428 aa13.4□□□□□ -0.26
DEPDC7-203ENST00000427755 ACCSLQ4AC99 568 aa13.4□□□□□ -0.26
DEPDC7-203ENST00000427755 CCDC157Q569K6 752 aa13.4□□□□□ -0.26
DEPDC7-203ENST00000427755 BRMS1LQ5PSV4 323 aa13.4□□□□□ -0.26
DEPDC7-203ENST00000427755 SFMBT2Q5VUG0 894 aa13.4□□□□□ -0.26
DEPDC7-203ENST00000427755 DSG4Q86SJ6 1040 aa13.4□□□□□ -0.26
DEPDC7-203ENST00000427755 PRPF39Q86UA1 669 aaKnown RBP13.4□□□□□ -0.26
DEPDC7-203ENST00000427755 ZDHHC17Q8IUH5 632 aa13.4□□□□□ -0.26
DEPDC7-203ENST00000427755 PIP4K2CQ8TBX8 421 aa13.4□□□□□ -0.26
DEPDC7-203ENST00000427755 TSC1Q92574 1164 aa13.4□□□□□ -0.26
DEPDC7-203ENST00000427755 PGAP3Q96FM1 320 aaPredicted RBP13.4□□□□□ -0.26
DEPDC7-203ENST00000427755 CNDP2Q96KP4 475 aaKnown RBP13.4□□□□□ -0.26
DEPDC7-203ENST00000427755 TKTL2Q9H0I9 626 aa13.4□□□□□ -0.26
DEPDC7-203ENST00000427755 SIK2Q9H0K1 926 aa13.4□□□□□ -0.26
DEPDC7-203ENST00000427755 NDST4Q9H3R1 872 aa13.4□□□□□ -0.26
DEPDC7-203ENST00000427755 RRN3Q9NYV6 651 aa13.4□□□□□ -0.26
DEPDC7-203ENST00000427755 SNX10Q9Y5X0 201 aa13.4□□□□□ -0.26
DEPDC7-203ENST00000427755 DRGXA6NNA5 263 aa13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 C1QTNF3-AMACRE9PGA6 284 aa13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 K7ERQ8 282 aa13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 RNF103O00237 685 aa13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 LDOC1O95751 146 aaPredicted RBP13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 SRCP12931 536 aa13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 NUDT1P36639 197 aa13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 SCNN1AP37088 669 aa13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 ARRB1P49407 418 aaPredicted RBP13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 ACADVLP49748 655 aa13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 CLDN6P56747 220 aa13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 SNX16P57768 344 aa13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 KCNMA1Q12791 1236 aa13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 DRAP1Q14919 205 aaPredicted RBP13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 COL28A1Q2UY09 1125 aa13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 VWA3BQ502W6 1294 aa13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 SLC45A4Q5BKX6 768 aa13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 PIP5KL1Q5T9C9 394 aa13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 TRNP1Q6NT89 227 aa13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 BNIPLQ7Z465 357 aa13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 IQCHQ86VS3 1027 aa13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 TMPRSS12Q86WS5 348 aa13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 EID2Q8N6I1 236 aa13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 PDCD7Q8N8D1 485 aaKnown RBP13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 TMEM145Q8NBT3 493 aa13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 OR2A12Q8NGT7 310 aa13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 MUC3BQ9H195 1237 aa13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 WDCPQ9H6R7 721 aa13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 SYNCQ9H7C4 482 aa13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 TMPRSS4Q9NRS4 437 aa13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 VPS51Q9UID3 782 aa13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 DMTF1Q9Y222 760 aa13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 CA5BQ9Y2D0 317 aa13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 CELSR3Q9NYQ7 3312 aa13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 APC2O95996 2303 aa13.39□□□□□ -0.27
DEPDC7-203ENST00000427755 IGLV3-10A0A075B6K4 115 aa13.38□□□□□ -0.27
DEPDC7-203ENST00000427755 A0A0D9SEW6 157 aa13.38□□□□□ -0.27
DEPDC7-203ENST00000427755 RFPL3O75679 317 aa13.38□□□□□ -0.27
DEPDC7-203ENST00000427755 RHOCP08134 193 aa13.38□□□□□ -0.27
DEPDC7-203ENST00000427755 C1SP09871 688 aa13.38□□□□□ -0.27
DEPDC7-203ENST00000427755 CYP11B1P15538 503 aa13.38□□□□□ -0.27
DEPDC7-203ENST00000427755 FLT3P36888 993 aa13.38□□□□□ -0.27
DEPDC7-203ENST00000427755 SULT1E1P49888 294 aa13.38□□□□□ -0.27
DEPDC7-203ENST00000427755 BPIFB4P59827 614 aa13.38□□□□□ -0.27
DEPDC7-203ENST00000427755 RNASE9P60153 205 aaKnown RBP13.38□□□□□ -0.27
DEPDC7-203ENST00000427755 OVGP1Q12889 678 aa13.38□□□□□ -0.27
DEPDC7-203ENST00000427755 COL9A2Q14055 689 aaPredicted RBP13.38□□□□□ -0.27
DEPDC7-203ENST00000427755 DPCR1Q3MIW9 517 aa13.38□□□□□ -0.27
DEPDC7-203ENST00000427755 SLC25A52Q3SY17 297 aa13.38□□□□□ -0.27
DEPDC7-203ENST00000427755 SETD3Q86TU7 594 aaPredicted RBP13.38□□□□□ -0.27
DEPDC7-203ENST00000427755 PDZD3Q86UT5 571 aa13.38□□□□□ -0.27
DEPDC7-203ENST00000427755 XYLT1Q86Y38 959 aa13.38□□□□□ -0.27
DEPDC7-203ENST00000427755 OXR1Q8N573 874 aa13.38□□□□□ -0.27
DEPDC7-203ENST00000427755 DCAF4L2Q8NA75 395 aa13.38□□□□□ -0.27
DEPDC7-203ENST00000427755 TMEM35BQ8NCS4 154 aa13.38□□□□□ -0.27
DEPDC7-203ENST00000427755 HNRNPLLQ8WVV9 542 aaKnown RBP13.38□□□□□ -0.27
DEPDC7-203ENST00000427755 ARRDC3Q96B67 414 aa13.38□□□□□ -0.27
DEPDC7-203ENST00000427755 C1orf74Q96LT6 269 aa13.38□□□□□ -0.27
DEPDC7-203ENST00000427755 TBCBQ99426 244 aa13.38□□□□□ -0.27
DEPDC7-203ENST00000427755 TUBGCP2Q9BSJ2 902 aa13.38□□□□□ -0.27
DEPDC7-203ENST00000427755 C2orf49Q9BVC5 232 aaPredicted RBP13.38□□□□□ -0.27
DEPDC7-203ENST00000427755 NAA15Q9BXJ9 866 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms