RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 LMBRD1Q9NUN5 540 aa6.08□□□□□ -1.44
C9orf3-205ENST00000427193 COL20A1Q9P218 1284 aa6.08□□□□□ -1.44
C9orf3-205ENST00000427193 HESX1Q9UBX0 185 aa6.08□□□□□ -1.44
C9orf3-205ENST00000427193 SEC63Q9UGP8 760 aaKnown RBP6.08□□□□□ -1.44
C9orf3-205ENST00000427193 FNDC1Q4ZHG4 1894 aaPredicted RBP6.08□□□□□ -1.44
C9orf3-205ENST00000427193 FRMPD3Q5JV73 1810 aa6.08□□□□□ -1.44
C9orf3-205ENST00000427193 FAM186AA6NE01 2351 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 DNM1LO00429 736 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 ZBED4O75132 1171 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 MOSPD3O75425 235 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 BMP15O95972 392 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 IGKV2-30P06310 120 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 HSP90AA1P07900 732 aaKnown RBP6.07□□□□□ -1.44
C9orf3-205ENST00000427193 CYP3A4P08684 503 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 IL6RP08887 468 aaPredicted RBP6.07□□□□□ -1.44
C9orf3-205ENST00000427193 NHLRC4P0CG21 123 aaPredicted RBP6.07□□□□□ -1.44
C9orf3-205ENST00000427193 TYRP14679 529 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 XBP1P17861 261 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 CYP2B6P20813 491 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 GNA11P29992 359 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 CYP2C18P33260 490 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 RECQLP46063 649 aaPredicted RBP6.07□□□□□ -1.44
C9orf3-205ENST00000427193 MRPL12P52815 198 aaKnown RBP6.07□□□□□ -1.44
C9orf3-205ENST00000427193 NAPAP54920 295 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 LOXL3P58215 753 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 KRTAP10-9P60411 292 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 AKAP17AQ02040 695 aaKnown RBP6.07□□□□□ -1.44
C9orf3-205ENST00000427193 ORC2Q13416 577 aaPredicted RBP6.07□□□□□ -1.44
C9orf3-205ENST00000427193 SLC18B1Q6NT16 456 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 FAM173BQ6P4H8 233 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 USP17L6PQ6QN14 398 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 MOXD1Q6UVY6 613 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 LAYNQ6UX15 382 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 PPP1R3BQ86XI6 285 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 ABRAQ8N0Z2 381 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 FAM133AQ8N9E0 248 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 MORC4Q8TE76 937 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 DENND1AQ8TEH3 1009 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 SOCS4Q8WXH5 440 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 USP6NLQ92738 828 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 CUL5Q93034 780 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 SLC46A1Q96NT5 459 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 PORCNQ9H237 461 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 C6orf50Q9HD87 102 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 A1CFQ9NQ94 594 aaKnown RBP6.07□□□□□ -1.44
C9orf3-205ENST00000427193 CYP39A1Q9NYL5 469 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 RCOR1Q9UKL0 485 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 CCPG1Q9ULG6 757 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 MRPL11Q9Y3B7 192 aaKnown RBP6.07□□□□□ -1.44
C9orf3-205ENST00000427193 PRRC2BQ5JSZ5 2229 aaKnown RBP6.07□□□□□ -1.44
C9orf3-205ENST00000427193 ZFHX4Q86UP3 3567 aa6.07□□□□□ -1.44
C9orf3-205ENST00000427193 ZFHX2Q9C0A1 2572 aaPredicted RBP6.07□□□□□ -1.44
C9orf3-205ENST00000427193 PLXNB2O15031 1838 aa6.06□□□□□ -1.44
C9orf3-205ENST00000427193 ELP1O95163 1332 aa6.06□□□□□ -1.44
C9orf3-205ENST00000427193 BAHCC1Q9P281 2608 aa6.06□□□□□ -1.44
C9orf3-205ENST00000427193 IGLV3-22A0A075B6J6 115 aa6.06□□□□□ -1.44
C9orf3-205ENST00000427193 LOC102724159A0A0B4J2E5 919 aa6.06□□□□□ -1.44
C9orf3-205ENST00000427193 FAM237AA0A1B0GTK4 181 aa6.06□□□□□ -1.44
C9orf3-205ENST00000427193 PRRT4C9JH25 899 aa6.06□□□□□ -1.44
C9orf3-205ENST00000427193 BAG4O95429 457 aaKnown RBP6.06□□□□□ -1.44
C9orf3-205ENST00000427193 SLC25A27O95847 323 aa6.06□□□□□ -1.44
C9orf3-205ENST00000427193 HOXC6P09630 235 aa6.06□□□□□ -1.44
C9orf3-205ENST00000427193 ATXN1LP0C7T5 689 aaKnown RBP6.06□□□□□ -1.44
C9orf3-205ENST00000427193 PPIFP30405 207 aaKnown RBP6.06□□□□□ -1.44
C9orf3-205ENST00000427193 COPB2P35606 906 aa6.06□□□□□ -1.44
C9orf3-205ENST00000427193 KRT2P35908 639 aa6.06□□□□□ -1.44
C9orf3-205ENST00000427193 LIPAP38571 399 aa6.06□□□□□ -1.44
C9orf3-205ENST00000427193 ZNF134P52741 427 aa6.06□□□□□ -1.44
C9orf3-205ENST00000427193 NLRP5P59047 1200 aa6.06□□□□□ -1.44
C9orf3-205ENST00000427193 RPS6P62753 249 aaKnown RBP6.06□□□□□ -1.44
C9orf3-205ENST00000427193 IRX3P78415 501 aaPredicted RBP6.06□□□□□ -1.44
C9orf3-205ENST00000427193 SLC39A14Q15043 492 aa6.06□□□□□ -1.44
C9orf3-205ENST00000427193 PWP2Q15269 919 aaKnown RBP6.06□□□□□ -1.44
C9orf3-205ENST00000427193 TRIM60Q495X7 471 aa6.06□□□□□ -1.44
C9orf3-205ENST00000427193 LONRF3Q496Y0 759 aa6.06□□□□□ -1.44
C9orf3-205ENST00000427193 RILPL1Q5EBL4 403 aa6.06□□□□□ -1.44
C9orf3-205ENST00000427193 CEP78Q5JTW2 689 aa6.06□□□□□ -1.44
C9orf3-205ENST00000427193 PCID2Q5JVF3 399 aa6.06□□□□□ -1.44
C9orf3-205ENST00000427193 SNRNP48Q6IEG0 339 aaKnown RBP6.06□□□□□ -1.44
C9orf3-205ENST00000427193 CCDC174Q6PII3 467 aa6.06□□□□□ -1.44
C9orf3-205ENST00000427193 B3GNT9Q6UX72 402 aa6.06□□□□□ -1.44
C9orf3-205ENST00000427193 SLC39A5Q6ZMH5 540 aa6.06□□□□□ -1.44
C9orf3-205ENST00000427193 USP45Q70EL2 814 aa6.06□□□□□ -1.44
C9orf3-205ENST00000427193 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.06□□□□□ -1.44
C9orf3-205ENST00000427193 BICD2Q8TD16 824 aa6.06□□□□□ -1.44
C9orf3-205ENST00000427193 PIBF1Q8WXW3 757 aa6.06□□□□□ -1.44
C9orf3-205ENST00000427193 ZNF48Q96MX3 618 aaPredicted RBP6.06□□□□□ -1.44
C9orf3-205ENST00000427193 USP28Q96RU2 1077 aa6.06□□□□□ -1.44
C9orf3-205ENST00000427193 MROH8Q9H579 483 aa6.06□□□□□ -1.44
C9orf3-205ENST00000427193 DUSP22Q9NRW4 184 aa6.06□□□□□ -1.44
C9orf3-205ENST00000427193 RNF146Q9NTX7 359 aa6.06□□□□□ -1.44
C9orf3-205ENST00000427193 PNPOQ9NVS9 261 aa6.06□□□□□ -1.44
C9orf3-205ENST00000427193 FBXO40Q9UH90 709 aa6.06□□□□□ -1.44
C9orf3-205ENST00000427193 TBC1D30Q9Y2I9 924 aa6.06□□□□□ -1.44
C9orf3-205ENST00000427193 VPS37CA5D8V6 355 aaPredicted RBP6.05□□□□□ -1.44
C9orf3-205ENST00000427193 H3BQV1 296 aa6.05□□□□□ -1.44
C9orf3-205ENST00000427193 IKBKBO14920 756 aa6.05□□□□□ -1.44
C9orf3-205ENST00000427193 KCNAB3O43448 404 aa6.05□□□□□ -1.44
C9orf3-205ENST00000427193 STRNO43815 780 aa6.05□□□□□ -1.44
C9orf3-205ENST00000427193 AHSGP02765 367 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms