RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 PAOXQ6QHF9 649 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 SPNS2Q8IVW8 549 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 KCTD4Q8WVF5 259 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 OPTNQ96CV9 577 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 MED10Q9BTT4 135 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 GRIP2Q9C0E4 1043 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 Q9H521 79 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 EIF2B3Q9NR50 452 aaKnown RBP7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 ADA2Q9NZK5 511 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 RBPJLQ9UBG7 517 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 ZDHHC2Q9UIJ5 367 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 SNX10Q9Y5X0 201 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 AP4B1Q9Y6B7 739 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 ZCWPW2A0A1B0GU75 182 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 CRTAMO95727 393 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 STAU1O95793 577 aaKnown RBP7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 JCHAINP01591 159 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 GLDCP23378 1020 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 TKTP29401 623 aaKnown RBP7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 RANBP1P43487 201 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 ACADSBP45954 432 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 CEACAM7Q14002 265 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 TTLL12Q14166 644 aaPredicted RBP7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 ZNF460Q14592 562 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 R3HDM1Q15032 1099 aaKnown RBP7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 FBXO47Q5MNV8 452 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 OGFRL1Q5TC84 451 aaPredicted RBP7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 METTL21CQ5VZV1 264 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 ARMC3Q5W041 872 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 C9orf57Q5W0N0 161 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 HFE2Q6ZVN8 426 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 MOB2Q70IA6 237 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 UNC93AQ86WB7 457 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 EZH1Q92800 747 aaPredicted RBP7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 BTBD9Q96Q07 612 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 PRPF18Q99633 342 aaKnown RBP7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 NPAS2Q99743 824 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 NXF3Q9H4D5 531 aaKnown RBP7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 OXSMQ9NWU1 459 aa7.67□□□□□ -1.18
SMARCC1-202ENST00000425518 H3BRB1 525 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 MATN2O00339 956 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 CNMDO75829 334 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 BEST1O76090 585 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 FBXO21O94952 628 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 SLC25A27O95847 323 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 JUNP05412 331 aaKnown RBP7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 NMBRP28336 390 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 PRDX6P30041 224 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 SNAPC2Q13487 334 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 NOL9Q5SY16 702 aaKnown RBP7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 KDELC2Q7Z4H8 507 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 CTU1Q7Z7A3 348 aaKnown RBP7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 NT5DC4Q86YG4 428 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 SIX6OS1Q8N1H7 587 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 DGCR14Q96DF8 476 aaKnown RBP7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 HSFY1Q96LI6 401 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 TUT1Q9H6E5 874 aaKnown RBP7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 WDR41Q9HAD4 459 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 PIGVQ9NUD9 493 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 SETD4Q9NVD3 440 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 C6orf203Q9P0P8 240 aaPredicted RBP7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 IGSF9Q9P2J2 1179 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 ADAM28Q9UKQ2 775 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 GNEQ9Y223 722 aaKnown RBP7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 RAP2CQ9Y3L5 183 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 SLC4A7Q9Y6M7 1214 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 RLFQ13129 1914 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 hCG_2014768A0A024R1R8 64 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 SMIM31A0A1B0GVY4 71 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 TMEM114B3SHH9 223 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 TMEM233B4DJY2 109 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 CASQ2O14958 399 aaPredicted RBP7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 TIMM44O43615 452 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 RECQL4O94761 1208 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 AP2A1O95782 977 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 NFKB1P19838 968 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 RPL5P46777 297 aaKnown RBP7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 TPI1P60174 286 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 POU5F1BQ06416 359 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 ARHGAP1Q07960 439 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 LAMC2Q13753 1193 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 GRM2Q14416 872 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 ARMCX2Q7L311 632 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 PCDH20Q8N6Y1 951 aaKnown RBP7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 APPL2Q8NEU8 664 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 RP9Q8TA86 221 aaKnown RBP7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 KBTBD7Q8WVZ9 684 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 CELF6Q96J87 481 aaKnown RBP7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 OSMRQ99650 979 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 PKP2Q99959 881 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 SEMA6AQ9H2E6 1030 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 CDHR5Q9HBB8 845 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 GJD2Q9UKL4 321 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 STAP1Q9ULZ2 295 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 CDYLQ9Y232 598 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 PEX1O43933 1283 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 HUS1O60921 280 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 TFAP2AP05549 437 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 ME2P23368 584 aa7.66□□□□□ -1.18
SMARCC1-202ENST00000425518 HOXA11P31270 313 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms