RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 TUBGCP4Q9UGJ1 667 aa16.94■□□□□ 0.3
PKP4-204ENST00000421462 RNF103O00237 685 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 MATN2O00339 956 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 NPM3O75607 178 aaKnown RBP16.93■□□□□ 0.3
PKP4-204ENST00000421462 MMP10P09238 476 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 PGAM1P18669 254 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 CYP3A5P20815 502 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 YAP1P46937 504 aaKnown RBP16.93■□□□□ 0.3
PKP4-204ENST00000421462 CD97P48960 835 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 NME5P56597 212 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 NUP107P57740 925 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 NEDD8Q15843 81 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 CCDC153Q494R4 210 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 BORAQ6PGQ7 559 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 Q6ZNX1 250 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 TRIM50Q86XT4 487 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 OFCC1Q8IZS5 231 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 RDM1Q8NG50 284 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 NSUN6Q8TEA1 469 aaKnown RBP16.93■□□□□ 0.3
PKP4-204ENST00000421462 CYGBQ8WWM9 190 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 IRGQQ8WZA9 623 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 GFM2Q969S9 779 aaKnown RBP16.93■□□□□ 0.3
PKP4-204ENST00000421462 ACE2Q9BYF1 805 aaPredicted RBP16.93■□□□□ 0.3
PKP4-204ENST00000421462 TRPC7Q9HCX4 862 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 UBP1Q9NZI7 540 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 DTLQ9NZJ0 730 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 SIX4Q9UIU6 781 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 COPG1Q9Y678 874 aaKnown RBP16.93■□□□□ 0.3
PKP4-204ENST00000421462 GCATO75600 419 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 TPSB2P20231 275 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 CD247P20963 164 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 ENPEPQ07075 957 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 CD300CQ08708 224 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 TPSAB1Q15661 275 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 FGD3Q5JSP0 725 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 FAM131BQ86XD5 332 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 C1orf127Q8N9H9 656 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 TRAPPC12Q8WVT3 735 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 RTP4Q96DX8 246 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 RANBP9Q96S59 729 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 CLK4Q9HAZ1 481 aaKnown RBP16.93■□□□□ 0.3
PKP4-204ENST00000421462 GGA3Q9NZ52 723 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 COQ6Q9Y2Z9 468 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.93■□□□□ 0.3
PKP4-204ENST00000421462 SNX9Q9Y5X1 595 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 KLRG2A4D1S0 409 aaPredicted RBP16.93■□□□□ 0.3
PKP4-204ENST00000421462 SOCS2O14508 198 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 ACOT8O14734 319 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 MSCO60682 206 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 HNRNPLP14866 589 aaKnown RBP eCLIP16.93■□□□□ 0.32e-6■■■□□ 17.5
PKP4-204ENST00000421462 NME3Q13232 169 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 GOLGA7BQ2TAP0 167 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 IARS2Q9NSE4 1012 aaKnown RBP16.93■□□□□ 0.3
PKP4-204ENST00000421462 PNPLA3Q9NST1 481 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 AP4E1Q9UPM8 1137 aa16.93■□□□□ 0.3
PKP4-204ENST00000421462 PLA2G6O60733 806 aa16.92■□□□□ 0.3
PKP4-204ENST00000421462 SPRP35270 261 aaPredicted RBP16.92■□□□□ 0.3
PKP4-204ENST00000421462 AP3M2P53677 418 aa16.92■□□□□ 0.3
PKP4-204ENST00000421462 C21orf59P57076 290 aa16.92■□□□□ 0.3
PKP4-204ENST00000421462 CNTN2Q02246 1040 aa16.92■□□□□ 0.3
PKP4-204ENST00000421462 EN1Q05925 392 aaPredicted RBP16.92■□□□□ 0.3
PKP4-204ENST00000421462 DCAF6Q58WW2 860 aa16.92■□□□□ 0.3
PKP4-204ENST00000421462 TREML2Q5T2D2 321 aa16.92■□□□□ 0.3
PKP4-204ENST00000421462 TMEM26Q6ZUK4 368 aa16.92■□□□□ 0.3
PKP4-204ENST00000421462 CCDC185Q8N715 623 aa16.92■□□□□ 0.3
PKP4-204ENST00000421462 ABHD8Q96I13 439 aa16.92■□□□□ 0.3
PKP4-204ENST00000421462 OSBPL11Q9BXB4 747 aa16.92■□□□□ 0.3
PKP4-204ENST00000421462 DEFB129Q9H1M3 183 aa16.92■□□□□ 0.3
PKP4-204ENST00000421462 SOX17Q9H6I2 414 aaPredicted RBP16.92■□□□□ 0.3
PKP4-204ENST00000421462 CPSF3Q9UKF6 684 aaKnown RBP16.92■□□□□ 0.3
PKP4-204ENST00000421462 SYNPO2Q9UMS6 1093 aa16.92■□□□□ 0.3
PKP4-204ENST00000421462 PTPRFP10586 1907 aa16.92■□□□□ 0.3
PKP4-204ENST00000421462 RNF103-CHMP3A0A140T963 221 aa16.92■□□□□ 0.3
PKP4-204ENST00000421462 TMEM221A6NGB7 291 aa16.92■□□□□ 0.3
PKP4-204ENST00000421462 WDR46O15213 610 aaKnown RBP16.92■□□□□ 0.3
PKP4-204ENST00000421462 GRID2O43424 1007 aa16.92■□□□□ 0.3
PKP4-204ENST00000421462 HTRA2O43464 458 aaPredicted RBP16.92■□□□□ 0.3
PKP4-204ENST00000421462 GRIA3P42263 894 aa16.92■□□□□ 0.3
PKP4-204ENST00000421462 SEMA5AQ13591 1074 aa16.92■□□□□ 0.3
PKP4-204ENST00000421462 AMHR2Q16671 573 aa16.92■□□□□ 0.3
PKP4-204ENST00000421462 STXBP5Q5T5C0 1151 aa16.92■□□□□ 0.3
PKP4-204ENST00000421462 METTL21CQ5VZV1 264 aa16.92■□□□□ 0.3
PKP4-204ENST00000421462 ACOT1Q86TX2 421 aa16.92■□□□□ 0.3
PKP4-204ENST00000421462 KCTD4Q8WVF5 259 aa16.92■□□□□ 0.3
PKP4-204ENST00000421462 RPF1Q9H9Y2 349 aaKnown RBP16.92■□□□□ 0.3
PKP4-204ENST00000421462 TLK1Q9UKI8 766 aa16.92■□□□□ 0.3
PKP4-204ENST00000421462 RUVBL2Q9Y230 463 aaKnown RBP16.92■□□□□ 0.3
PKP4-204ENST00000421462 WDR81Q562E7 1941 aa16.91■□□□□ 0.3
PKP4-204ENST00000421462 TCAF2A6NFQ2 919 aa16.91■□□□□ 0.3
PKP4-204ENST00000421462 K7EPI3 171 aa16.91■□□□□ 0.3
PKP4-204ENST00000421462 PIGRP01833 764 aa16.91■□□□□ 0.3
PKP4-204ENST00000421462 LCP1P13796 627 aa16.91■□□□□ 0.3
PKP4-204ENST00000421462 RELAQ04206 551 aa16.91■□□□□ 0.3
PKP4-204ENST00000421462 TGFBIQ15582 683 aa16.91■□□□□ 0.3
PKP4-204ENST00000421462 VPS72Q15906 364 aa16.91■□□□□ 0.3
PKP4-204ENST00000421462 AGKQ53H12 422 aa16.91■□□□□ 0.3
PKP4-204ENST00000421462 LDLRAP1Q5SW96 308 aa16.91■□□□□ 0.3
PKP4-204ENST00000421462 NDRG1Q92597 394 aaKnown RBP16.91■□□□□ 0.3
PKP4-204ENST00000421462 DLG3Q92796 817 aa16.91■□□□□ 0.3
PKP4-204ENST00000421462 RPL10LQ96L21 214 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms