RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 CRTC2Q53ET0 693 aaPredicted RBP9.3□□□□□ -0.92
TRIM39-206ENST00000420746 PITRM1Q5JRX3 1037 aa9.3□□□□□ -0.92
TRIM39-206ENST00000420746 PIK3R6Q5UE93 754 aa9.3□□□□□ -0.92
TRIM39-206ENST00000420746 DIEXFQ68CQ4 756 aaKnown RBP9.3□□□□□ -0.92
TRIM39-206ENST00000420746 HORMAD1Q86X24 394 aa9.3□□□□□ -0.92
TRIM39-206ENST00000420746 CBWD2Q8IUF1 395 aa9.3□□□□□ -0.92
TRIM39-206ENST00000420746 IL22RA1Q8N6P7 574 aa9.3□□□□□ -0.92
TRIM39-206ENST00000420746 OR6C4Q8NGE1 309 aa9.3□□□□□ -0.92
TRIM39-206ENST00000420746 LMX1AQ8TE12 382 aa9.3□□□□□ -0.92
TRIM39-206ENST00000420746 NOC3LQ8WTT2 800 aaKnown RBP9.3□□□□□ -0.92
TRIM39-206ENST00000420746 LARP4BQ92615 738 aaKnown RBP9.3□□□□□ -0.92
TRIM39-206ENST00000420746 NOX5Q96PH1 765 aa9.3□□□□□ -0.92
TRIM39-206ENST00000420746 MYOCQ99972 504 aa9.3□□□□□ -0.92
TRIM39-206ENST00000420746 CAAP1Q9H8G2 361 aa9.3□□□□□ -0.92
TRIM39-206ENST00000420746 SPASTQ9UBP0 616 aa9.3□□□□□ -0.92
TRIM39-206ENST00000420746 CSMD2Q7Z408 3487 aa9.3□□□□□ -0.92
TRIM39-206ENST00000420746 A0A1W2PQM1 296 aa9.29□□□□□ -0.92
TRIM39-206ENST00000420746 EFCAB7A8K855 629 aa9.29□□□□□ -0.92
TRIM39-206ENST00000420746 TBL1XO60907 577 aa9.29□□□□□ -0.92
TRIM39-206ENST00000420746 GCNT3O95395 438 aa9.29□□□□□ -0.92
TRIM39-206ENST00000420746 LDLRP01130 860 aa9.29□□□□□ -0.92
TRIM39-206ENST00000420746 JUNDP17535 347 aa9.29□□□□□ -0.92
TRIM39-206ENST00000420746 NNMTP40261 264 aa9.29□□□□□ -0.92
TRIM39-206ENST00000420746 UBA7P41226 1012 aa9.29□□□□□ -0.92
TRIM39-206ENST00000420746 RABIFP47224 123 aa9.29□□□□□ -0.92
TRIM39-206ENST00000420746 VASPP50552 380 aaPredicted RBP9.29□□□□□ -0.92
TRIM39-206ENST00000420746 METAP1P53582 386 aa9.29□□□□□ -0.92
TRIM39-206ENST00000420746 CDC20Q12834 499 aa9.29□□□□□ -0.92
TRIM39-206ENST00000420746 CNTN1Q12860 1018 aa9.29□□□□□ -0.92
TRIM39-206ENST00000420746 PSMD6Q15008 389 aa9.29□□□□□ -0.92
TRIM39-206ENST00000420746 ZNF667Q5HYK9 610 aa9.29□□□□□ -0.92
TRIM39-206ENST00000420746 RNF219Q5W0B1 726 aaPredicted RBP9.29□□□□□ -0.92
TRIM39-206ENST00000420746 NUGGCQ68CJ6 796 aa9.29□□□□□ -0.92
TRIM39-206ENST00000420746 PTAR1Q7Z6K3 402 aaPredicted RBP9.29□□□□□ -0.92
TRIM39-206ENST00000420746 ARL10Q8N8L6 244 aa9.29□□□□□ -0.92
TRIM39-206ENST00000420746 C12orf29Q8N999 325 aa9.29□□□□□ -0.92
TRIM39-206ENST00000420746 CPT1CQ8TCG5 803 aa9.29□□□□□ -0.92
TRIM39-206ENST00000420746 OR8D1Q8WZ84 308 aa9.29□□□□□ -0.92
TRIM39-206ENST00000420746 JAKMIP2Q96AA8 810 aa9.29□□□□□ -0.92
TRIM39-206ENST00000420746 BMFQ96LC9 184 aa9.29□□□□□ -0.92
TRIM39-206ENST00000420746 HAPLN3Q96S86 360 aa9.29□□□□□ -0.92
TRIM39-206ENST00000420746 SLC4A5Q9BY07 1137 aa9.29□□□□□ -0.92
TRIM39-206ENST00000420746 LRRN3Q9H3W5 708 aa9.29□□□□□ -0.92
TRIM39-206ENST00000420746 FZD3Q9NPG1 666 aa9.29□□□□□ -0.92
TRIM39-206ENST00000420746 FAM49BQ9NUQ9 324 aa9.29□□□□□ -0.92
TRIM39-206ENST00000420746 SLCO3A1Q9UIG8 710 aa9.29□□□□□ -0.92
TRIM39-206ENST00000420746 KLF15Q9UIH9 416 aa9.29□□□□□ -0.92
TRIM39-206ENST00000420746 PPM1HQ9ULR3 514 aa9.29□□□□□ -0.92
TRIM39-206ENST00000420746 TP53TG5Q9Y2B4 290 aa9.29□□□□□ -0.92
TRIM39-206ENST00000420746 PCDHGA3Q9Y5H0 932 aa9.29□□□□□ -0.92
TRIM39-206ENST00000420746 TYW5A2RUC4 315 aaKnown RBP9.28□□□□□ -0.92
TRIM39-206ENST00000420746 RPLP0P05388 317 aaKnown RBP9.28□□□□□ -0.92
TRIM39-206ENST00000420746 ANXA6P08133 673 aa9.28□□□□□ -0.92
TRIM39-206ENST00000420746 DLATP10515 647 aaKnown RBP9.28□□□□□ -0.92
TRIM39-206ENST00000420746 P4HA1P13674 534 aa9.28□□□□□ -0.92
TRIM39-206ENST00000420746 ADORA2BP29275 332 aa9.28□□□□□ -0.92
TRIM39-206ENST00000420746 CASP5P51878 434 aa9.28□□□□□ -0.92
TRIM39-206ENST00000420746 NDST1P52848 882 aa9.28□□□□□ -0.92
TRIM39-206ENST00000420746 MAPK10P53779 464 aa9.28□□□□□ -0.92
TRIM39-206ENST00000420746 CLDN2P57739 230 aa9.28□□□□□ -0.92
TRIM39-206ENST00000420746 YWHAGP61981 247 aaKnown RBP eCLIP9.28□□□□□ -0.92
TRIM39-206ENST00000420746 CCL7P80098 99 aa9.28□□□□□ -0.92
TRIM39-206ENST00000420746 ZNF699Q32M78 642 aa9.28□□□□□ -0.92
TRIM39-206ENST00000420746 TMEM259Q4ZIN3 620 aa9.28□□□□□ -0.92
TRIM39-206ENST00000420746 PIP5KL1Q5T9C9 394 aa9.28□□□□□ -0.92
TRIM39-206ENST00000420746 CCDC117Q8IWD4 279 aaPredicted RBP9.28□□□□□ -0.92
TRIM39-206ENST00000420746 CCDC13Q8IYE1 715 aa9.28□□□□□ -0.92
TRIM39-206ENST00000420746 SDR16C5Q8N3Y7 309 aa9.28□□□□□ -0.92
TRIM39-206ENST00000420746 HJURPQ8NCD3 748 aaPredicted RBP9.28□□□□□ -0.92
TRIM39-206ENST00000420746 CCDC74AQ96AQ1 378 aa9.28□□□□□ -0.92
TRIM39-206ENST00000420746 PPP1R13BQ96KQ4 1090 aa9.28□□□□□ -0.92
TRIM39-206ENST00000420746 EFHD1Q9BUP0 239 aa9.28□□□□□ -0.92
TRIM39-206ENST00000420746 CPEB1Q9BZB8 566 aaKnown RBP9.28□□□□□ -0.92
TRIM39-206ENST00000420746 SDCBP2Q9H190 292 aa9.28□□□□□ -0.92
TRIM39-206ENST00000420746 CASS4Q9NQ75 786 aa9.28□□□□□ -0.92
TRIM39-206ENST00000420746 AKAP7Q9P0M2 348 aaPredicted RBP9.28□□□□□ -0.92
TRIM39-206ENST00000420746 SARDHQ9UL12 918 aa9.28□□□□□ -0.92
TRIM39-206ENST00000420746 NAALADL1Q9UQQ1 740 aa9.28□□□□□ -0.92
TRIM39-206ENST00000420746 KCTD3Q9Y597 815 aa9.28□□□□□ -0.92
TRIM39-206ENST00000420746 NYNRINQ9P2P1 1898 aaKnown RBP9.28□□□□□ -0.92
TRIM39-206ENST00000420746 TTLL8A6PVC2 850 aa9.27□□□□□ -0.93
TRIM39-206ENST00000420746 MKRN2OSH3BPM6 223 aa9.27□□□□□ -0.93
TRIM39-206ENST00000420746 MCF2LO15068 1137 aa9.27□□□□□ -0.93
TRIM39-206ENST00000420746 GCATO75600 419 aa9.27□□□□□ -0.93
TRIM39-206ENST00000420746 CTSOP43234 321 aaPredicted RBP9.27□□□□□ -0.93
TRIM39-206ENST00000420746 SLC11A2P49281 568 aa9.27□□□□□ -0.93
TRIM39-206ENST00000420746 MC1RQ01726 317 aa9.27□□□□□ -0.93
TRIM39-206ENST00000420746 SULT2A1Q06520 285 aa9.27□□□□□ -0.93
TRIM39-206ENST00000420746 CDH18Q13634 790 aa9.27□□□□□ -0.93
TRIM39-206ENST00000420746 SNRNP35Q16560 246 aaKnown RBP9.27□□□□□ -0.93
TRIM39-206ENST00000420746 DCAF6Q58WW2 860 aa9.27□□□□□ -0.93
TRIM39-206ENST00000420746 RILPL1Q5EBL4 403 aa9.27□□□□□ -0.93
TRIM39-206ENST00000420746 RAB41Q5JT25 222 aa9.27□□□□□ -0.93
TRIM39-206ENST00000420746 OR6B2Q6IFH4 312 aa9.27□□□□□ -0.93
TRIM39-206ENST00000420746 LVRNQ6Q4G3 990 aa9.27□□□□□ -0.93
TRIM39-206ENST00000420746 ZSCAN30Q86W11 494 aa9.27□□□□□ -0.93
TRIM39-206ENST00000420746 SLITRK4Q8IW52 837 aa9.27□□□□□ -0.93
TRIM39-206ENST00000420746 FRS2Q8WU20 508 aa9.27□□□□□ -0.93
TRIM39-206ENST00000420746 MARVELD3Q96A59 401 aa9.27□□□□□ -0.93
TRIM39-206ENST00000420746 AZIN2Q96A70 460 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms