RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 ELK3P41970 407 aa8.59□□□□□ -1.04
UBR4-206ENST00000419533 SKIV2L2P42285 1042 aaKnown RBP8.59□□□□□ -1.04
UBR4-206ENST00000419533 DLG4P78352 724 aa8.59□□□□□ -1.04
UBR4-206ENST00000419533 LYPLAL1Q5VWZ2 237 aa8.59□□□□□ -1.04
UBR4-206ENST00000419533 PLPP4Q5VZY2 271 aa8.59□□□□□ -1.04
UBR4-206ENST00000419533 ABHD15Q6UXT9 468 aa8.59□□□□□ -1.04
UBR4-206ENST00000419533 STARD8Q92502 1023 aa8.59□□□□□ -1.04
UBR4-206ENST00000419533 LACRTQ9GZZ8 138 aa8.59□□□□□ -1.04
UBR4-206ENST00000419533 RNPEPQ9H4A4 650 aa8.59□□□□□ -1.04
UBR4-206ENST00000419533 RNF19AQ9NV58 838 aa8.59□□□□□ -1.04
UBR4-206ENST00000419533 DNAJC16Q9Y2G8 782 aa8.59□□□□□ -1.04
UBR4-206ENST00000419533 SLC27A5Q9Y2P5 690 aa8.59□□□□□ -1.04
UBR4-206ENST00000419533 F8VP50 259 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 DAB1O75553 588 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 CATP04040 527 aaKnown RBP8.58□□□□□ -1.04
UBR4-206ENST00000419533 HTR1BP28222 390 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 GTF2E2P29084 291 aaKnown RBP8.58□□□□□ -1.04
UBR4-206ENST00000419533 TNFSF9P41273 254 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 GRAMD4Q6IC98 578 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 CPA6Q8N4T0 437 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 PAWRQ96IZ0 340 aaKnown RBP8.58□□□□□ -1.04
UBR4-206ENST00000419533 QRFPRQ96P65 431 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 ASB2Q96Q27 587 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 MCCC1Q96RQ3 725 aaPredicted RBP8.58□□□□□ -1.04
UBR4-206ENST00000419533 HSD17B14Q9BPX1 270 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 SLC40A1Q9NP59 571 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 HPS4Q9NQG7 708 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 ZNF214Q9UL59 606 aaPredicted RBP8.58□□□□□ -1.04
UBR4-206ENST00000419533 ASTN1O14525 1302 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 VPS4BO75351 444 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 ICAM3P32942 547 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 SERPINB5P36952 375 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 ALDH9A1P49189 494 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 SMAD3P84022 425 aaKnown RBP8.58□□□□□ -1.04
UBR4-206ENST00000419533 MLLT1Q03111 559 aaPredicted RBP8.58□□□□□ -1.04
UBR4-206ENST00000419533 CHRNB3Q05901 458 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 LRRC38Q5VT99 294 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 DAB2IPQ5VWQ8 1189 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 FAM43BQ6ZT52 329 aaPredicted RBP8.58□□□□□ -1.04
UBR4-206ENST00000419533 SH3RF1Q7Z6J0 888 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 FBXO25Q8TCJ0 367 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 DTX3LQ8TDB6 740 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 ZNF384Q8TF68 577 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 LRRC39Q96DD0 335 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 BBS2Q9BXC9 721 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 PRRG3Q9BZD7 231 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 DPY30Q9C005 99 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 GNPTGQ9UJJ9 305 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 TMCO1Q9UM00 188 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 XPO1O14980 1071 aaKnown RBP8.58□□□□□ -1.04
UBR4-206ENST00000419533 AMD1P17707 334 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 RANBP1P43487 201 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 SLC16A1P53985 500 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 SULT2A1Q06520 285 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 SLC20A2Q08357 652 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 CCDC85BQ15834 202 aaPredicted RBP8.58□□□□□ -1.04
UBR4-206ENST00000419533 CCL14Q16627 93 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 PCID2Q5JVF3 399 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 PSTKQ8IV42 348 aaKnown RBP8.58□□□□□ -1.04
UBR4-206ENST00000419533 MRPL48Q96GC5 212 aaKnown RBP8.58□□□□□ -1.04
UBR4-206ENST00000419533 FAM126AQ9BYI3 521 aaPredicted RBP8.58□□□□□ -1.04
UBR4-206ENST00000419533 CNGB3Q9NQW8 809 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 IMPAD1Q9NX62 359 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 TRPC4Q9UBN4 977 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 VTI1BQ9UEU0 232 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 BCORQ6W2J9 1755 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 PYGMP11217 842 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 CCND1P24385 295 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 FMO4P31512 558 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 GPR1P46091 355 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 CRY1Q16526 586 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 SHROOM1Q2M3G4 852 aaPredicted RBP8.58□□□□□ -1.04
UBR4-206ENST00000419533 PPP1R15BQ5SWA1 713 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 KDM7AQ6ZMT4 941 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 MILR1Q7Z6M3 343 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 RBM23Q86U06 439 aaKnown RBP8.58□□□□□ -1.04
UBR4-206ENST00000419533 EPS8L1Q8TE68 723 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 UBE2E3Q969T4 207 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 DUSP16Q9BY84 665 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 IL22Q9GZX6 179 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 L1RE1Q9UN81 338 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 V9GYQ6 96 aa8.58□□□□□ -1.04
UBR4-206ENST00000419533 SIPA1L3O60292 1781 aaPredicted RBP8.58□□□□□ -1.04
UBR4-206ENST00000419533 CCT8L1PA6NM43 557 aa8.57□□□□□ -1.04
UBR4-206ENST00000419533 TRDMT1O14717 391 aaKnown RBP8.57□□□□□ -1.04
UBR4-206ENST00000419533 UBDO15205 165 aa8.57□□□□□ -1.04
UBR4-206ENST00000419533 B4GALT5O43286 388 aa8.57□□□□□ -1.04
UBR4-206ENST00000419533 ALBP02768 609 aa8.57□□□□□ -1.04
UBR4-206ENST00000419533 CXCR2P25025 360 aa8.57□□□□□ -1.04
UBR4-206ENST00000419533 GABRR2P28476 465 aa8.57□□□□□ -1.04
UBR4-206ENST00000419533 HSPA13P48723 471 aa8.57□□□□□ -1.04
UBR4-206ENST00000419533 PEX5P50542 639 aa8.57□□□□□ -1.04
UBR4-206ENST00000419533 AIF1P55008 147 aa8.57□□□□□ -1.04
UBR4-206ENST00000419533 OVGP1Q12889 678 aa8.57□□□□□ -1.04
UBR4-206ENST00000419533 ITGB3BPQ13352 177 aaPredicted RBP8.57□□□□□ -1.04
UBR4-206ENST00000419533 MAMLD1Q13495 774 aa8.57□□□□□ -1.04
UBR4-206ENST00000419533 BMPR2Q13873 1038 aa8.57□□□□□ -1.04
UBR4-206ENST00000419533 TRIP10Q15642 601 aa8.57□□□□□ -1.04
UBR4-206ENST00000419533 C9orf57Q5W0N0 161 aa8.57□□□□□ -1.04
UBR4-206ENST00000419533 FAM35AQ86V20 835 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms