RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 VPS51Q9UID3 782 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 IFT52Q9Y366 437 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 SPO11Q9Y5K1 396 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 BRCA2P51587 3418 aa8.17□□□□□ -1.1
HMGXB4-202ENST00000418170 G3V2L1 256 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 CPNE6O95741 557 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 TRUB2O95900 331 aaKnown RBP8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 TPSB2P20231 275 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 TCEA1P23193 301 aaKnown RBP8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 TYK2P29597 1187 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 GRIA3P42263 894 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 HK2P52789 917 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 PSME3P61289 254 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 MERTKQ12866 999 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 PRKG1Q13976 671 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 TPSAB1Q15661 275 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 UGCGQ16739 394 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 SLC36A3Q495N2 470 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 GADL1Q6ZQY3 521 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 MCF2L2Q86YR7 1114 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 CAMK1DQ8IU85 385 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 C4orf19Q8IY42 314 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 LPGAT1Q92604 370 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 CDKL2Q92772 493 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 PBXIP1Q96AQ6 731 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 ARPC5LQ9BPX5 153 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 USP18Q9UMW8 372 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 TCAF1Q9Y4C2 921 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 CTDP1Q9Y5B0 961 aaPredicted RBP8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 TRIM24O15164 1050 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 H2AFYO75367 372 aaKnown RBP8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 HSPA1AP0DMV8 641 aaKnown RBP8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 HSPA1BP0DMV9 641 aaKnown RBP8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 ATP2B4P23634 1241 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 MPSTP25325 297 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 XKR9Q5GH70 373 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 TMEM198Q66K66 360 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 TMCO5AQ8N6Q1 288 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 EMC1Q8N766 993 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 SREK1Q8WXA9 508 aaKnown RBP8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 PPP1R36Q96LQ0 422 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 UNC93B1Q9H1C4 597 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 ADAMTS10Q9H324 1103 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 MTMR10Q9NXD2 777 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 POU2F3Q9UKI9 436 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 RAP2CQ9Y3L5 183 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 PSAT1Q9Y617 370 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 BCLAF3A2AJT9 711 aaKnown RBP8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 KPNA7A9QM74 516 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 CLDN25C9JDP6 229 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 E7ENX8 843 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 EIF3FO00303 357 aaPredicted RBP8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 TRIM13O60858 407 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 JRKO75564 520 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 TIPRLO75663 272 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 SEC24DO94855 1032 aaPredicted RBP8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 ITGBL1O95965 494 aaPredicted RBP8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 MATN1P21941 496 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 POLR2BP30876 1174 aaKnown RBP8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 GMPRP36959 345 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 NAB1Q13506 487 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 PTPN20Q4JDL3 420 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 C4orf22Q6V702 233 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 TMEM179Q6ZVK1 233 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 VASH1Q7L8A9 365 aaPredicted RBP8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 ERMP1Q7Z2K6 904 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 CBR4Q8N4T8 237 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 SLC4A11Q8NBS3 891 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 SMARCAD1Q9H4L7 1026 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 GPN2Q9H9Y4 310 aaPredicted RBP8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 ARMC1Q9NVT9 282 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 ANKMY1Q9P2S6 941 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 TRAF6Q9Y4K3 522 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 TIMM22Q9Y584 194 aa8.16□□□□□ -1.1
HMGXB4-202ENST00000418170 ZNF541Q9H0D2 1346 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 GRID2O43424 1007 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 CHRNGP07510 517 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 NAT1P18440 290 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 HPCAL1P37235 193 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 RPL14P50914 215 aaKnown RBP8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 HSD17B4P51659 736 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 CDH6P55285 790 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 TNK2Q07912 1038 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 SELENBP1Q13228 472 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 ZNF846Q147U1 533 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 PDK2Q15119 407 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 NEDD8Q15843 81 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 CDC42EP5Q6NZY7 148 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 ABRAXAS1Q6UWZ7 409 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 TRMT1LQ7Z2T5 733 aaKnown RBP8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 BTLAQ7Z6A9 289 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 PLD5Q8N7P1 536 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 TTLL6Q8N841 843 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 ATP6V0D2Q8N8Y2 350 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 HERC2P3Q9BVR0 1158 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 IMPG2Q9BZV3 1241 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 VPS33BQ9H267 617 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 ZFYVE28Q9HCC9 887 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 CD320Q9NPF0 282 aa8.15□□□□□ -1.1
HMGXB4-202ENST00000418170 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms