RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 MLPHQ9BV36 600 aaPredicted RBP17.13■□□□□ 0.33
SSBP3-205ENST00000417664 IL22Q9GZX6 179 aa17.13■□□□□ 0.33
SSBP3-205ENST00000417664 ZBP1Q9H171 429 aa17.13■□□□□ 0.33
SSBP3-205ENST00000417664 ZNF212Q9UDV6 495 aa17.13■□□□□ 0.33
SSBP3-205ENST00000417664 INSL5Q9Y5Q6 135 aa17.13■□□□□ 0.33
SSBP3-205ENST00000417664 F5H423 210 aaPredicted RBP17.13■□□□□ 0.33
SSBP3-205ENST00000417664 RAMP2O60895 175 aa17.13■□□□□ 0.33
SSBP3-205ENST00000417664 KRT38O76015 456 aa17.13■□□□□ 0.33
SSBP3-205ENST00000417664 MT-ND3P03897 115 aa17.13■□□□□ 0.33
SSBP3-205ENST00000417664 SNRPAP09012 282 aaKnown RBP17.13■□□□□ 0.33
SSBP3-205ENST00000417664 SEC24CP53992 1094 aa17.13■□□□□ 0.33
SSBP3-205ENST00000417664 TWF1Q12792 350 aa17.13■□□□□ 0.33
SSBP3-205ENST00000417664 ALFQ53S48 1182 aa17.13■□□□□ 0.33
SSBP3-205ENST00000417664 TFAP2DQ7Z6R9 452 aa17.13■□□□□ 0.33
SSBP3-205ENST00000417664 DNAJB7Q7Z6W7 309 aaPredicted RBP17.13■□□□□ 0.33
SSBP3-205ENST00000417664 UBE2Q1Q7Z7E8 422 aa17.13■□□□□ 0.33
SSBP3-205ENST00000417664 SPATS2Q86XZ4 545 aaKnown RBP17.13■□□□□ 0.33
SSBP3-205ENST00000417664 PPM1NQ8N819 430 aa17.13■□□□□ 0.33
SSBP3-205ENST00000417664 OR52K1Q8NGK4 314 aa17.13■□□□□ 0.33
SSBP3-205ENST00000417664 IGSF8Q969P0 613 aa17.13■□□□□ 0.33
SSBP3-205ENST00000417664 ZNF317Q96PQ6 595 aaPredicted RBP17.13■□□□□ 0.33
SSBP3-205ENST00000417664 DDX50Q9BQ39 737 aaKnown RBP17.13■□□□□ 0.33
SSBP3-205ENST00000417664 RBM22Q9NW64 420 aaKnown RBP eCLIP17.13■□□□□ 0.33
SSBP3-205ENST00000417664 ZBBXA8MT70 800 aa17.12■□□□□ 0.33
SSBP3-205ENST00000417664 TEX28O15482 410 aa17.12■□□□□ 0.33
SSBP3-205ENST00000417664 TYROBPO43914 113 aa17.12■□□□□ 0.33
SSBP3-205ENST00000417664 CNTN5O94779 1100 aa17.12■□□□□ 0.33
SSBP3-205ENST00000417664 ZWINTO95229 277 aa17.12■□□□□ 0.33
SSBP3-205ENST00000417664 LATS1O95835 1130 aa17.12■□□□□ 0.33
SSBP3-205ENST00000417664 OAS1P00973 400 aaKnown RBP17.12■□□□□ 0.33
SSBP3-205ENST00000417664 KRT4P19013 534 aa17.12■□□□□ 0.33
SSBP3-205ENST00000417664 KCNQ1P51787 676 aa17.12■□□□□ 0.33
SSBP3-205ENST00000417664 IL9RQ01113 521 aa17.12■□□□□ 0.33
SSBP3-205ENST00000417664 FPGSQ05932 587 aa17.12■□□□□ 0.33
SSBP3-205ENST00000417664 DNAJC3Q13217 504 aa17.12■□□□□ 0.33
SSBP3-205ENST00000417664 CRYMQ14894 314 aa17.12■□□□□ 0.33
SSBP3-205ENST00000417664 POLD3Q15054 466 aaPredicted RBP17.12■□□□□ 0.33
SSBP3-205ENST00000417664 RABGAP1LQ5R372 815 aa17.12■□□□□ 0.33
SSBP3-205ENST00000417664 NADSYN1Q6IA69 706 aa17.12■□□□□ 0.33
SSBP3-205ENST00000417664 TMEM135Q86UB9 458 aa17.12■□□□□ 0.33
SSBP3-205ENST00000417664 ZNF473Q8WTR7 871 aaKnown RBP17.12■□□□□ 0.33
SSBP3-205ENST00000417664 CKAP2Q8WWK9 683 aa17.12■□□□□ 0.33
SSBP3-205ENST00000417664 HMCESQ96FZ2 354 aa17.12■□□□□ 0.33
SSBP3-205ENST00000417664 ENTPD7Q9NQZ7 604 aa17.12■□□□□ 0.33
SSBP3-205ENST00000417664 HAUS2Q9NVX0 235 aa17.12■□□□□ 0.33
SSBP3-205ENST00000417664 SYBUQ9NX95 663 aa17.12■□□□□ 0.33
SSBP3-205ENST00000417664 FAM237BA0A1B0GVD1 139 aa17.11■□□□□ 0.33
SSBP3-205ENST00000417664 TM9SF1O15321 606 aa17.11■□□□□ 0.33
SSBP3-205ENST00000417664 USP1O94782 785 aa17.11■□□□□ 0.33
SSBP3-205ENST00000417664 OR1E1P30953 314 aa17.11■□□□□ 0.33
SSBP3-205ENST00000417664 CDH4P55283 916 aa17.11■□□□□ 0.33
SSBP3-205ENST00000417664 IL10RBQ08334 325 aa17.11■□□□□ 0.33
SSBP3-205ENST00000417664 MPP3Q13368 585 aa17.11■□□□□ 0.33
SSBP3-205ENST00000417664 MPP2Q14168 576 aa17.11■□□□□ 0.33
SSBP3-205ENST00000417664 SPARCL1Q14515 664 aa17.11■□□□□ 0.33
SSBP3-205ENST00000417664 PSRC1Q6PGN9 363 aaPredicted RBP17.11■□□□□ 0.33
SSBP3-205ENST00000417664 MARK2Q7KZI7 788 aaKnown RBP17.11■□□□□ 0.33
SSBP3-205ENST00000417664 C16orf59Q7L2K0 433 aa17.11■□□□□ 0.33
SSBP3-205ENST00000417664 TEX26Q8N6G2 289 aa17.11■□□□□ 0.33
SSBP3-205ENST00000417664 ANKRD42Q8N9B4 389 aa17.11■□□□□ 0.33
SSBP3-205ENST00000417664 DENND1AQ8TEH3 1009 aa17.11■□□□□ 0.33
SSBP3-205ENST00000417664 OXNAD1Q96HP4 312 aaPredicted RBP17.11■□□□□ 0.33
SSBP3-205ENST00000417664 NSRP1Q9H0G5 558 aaKnown RBP17.11■□□□□ 0.33
SSBP3-205ENST00000417664 SLC25A51Q9H1U9 297 aa17.11■□□□□ 0.33
SSBP3-205ENST00000417664 SP110Q9HB58 689 aa17.11■□□□□ 0.33
SSBP3-205ENST00000417664 VPS45Q9NRW7 570 aa17.11■□□□□ 0.33
SSBP3-205ENST00000417664 GGA2Q9UJY4 613 aa17.11■□□□□ 0.33
SSBP3-205ENST00000417664 A0A1W2PPM1 405 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 FOXO6A8MYZ6 492 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 EBAG9O00559 213 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 PEX11BO96011 259 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 LINC00271P0C7V0 271 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 CA4P22748 312 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 SERINC3Q13530 473 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 FAM133BQ5BKY9 247 aaKnown RBP17.1■□□□□ 0.33
SSBP3-205ENST00000417664 MARC1Q5VT66 337 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 TRMT10BQ6PF06 316 aaKnown RBP17.1■□□□□ 0.33
SSBP3-205ENST00000417664 CCDC149Q6ZUS6 474 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 OTOP3Q7RTS5 596 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 CPLX4Q7Z7G2 160 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 LGI2Q8N0V4 545 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 USP33Q8TEY7 942 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 PTCD2Q8WV60 388 aaKnown RBP17.1■□□□□ 0.33
SSBP3-205ENST00000417664 MAGEB18Q96M61 343 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 ZNF599Q96NL3 588 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 ZBED2Q9BTP6 218 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 KLF16Q9BXK1 252 aaPredicted RBP17.1■□□□□ 0.33
SSBP3-205ENST00000417664 MAGEH1Q9H213 219 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 LZTS1Q9Y250 596 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 RPS6KL1Q9Y6S9 549 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 NYNRINQ9P2P1 1898 aaKnown RBP17.1■□□□□ 0.33
SSBP3-205ENST00000417664 CXorf49A8MYA2 514 aaPredicted RBP17.1■□□□□ 0.33
SSBP3-205ENST00000417664 CLDN11O75508 207 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 STC2O76061 302 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 ASMTLO95671 621 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 HLA-DQB2P05538 268 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 SLC18A2Q05940 514 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 MGAT5Q09328 741 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 NIPAL4Q0D2K0 466 aa17.1■□□□□ 0.33
SSBP3-205ENST00000417664 C4orf33Q8N1A6 199 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms