RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 MPP3Q13368 585 aa14.77□□□□□ -0.05
HDAC9-208ENST00000417496 MSLNQ13421 630 aaPredicted RBP14.77□□□□□ -0.05
HDAC9-208ENST00000417496 GRM3Q14832 879 aa14.77□□□□□ -0.05
HDAC9-208ENST00000417496 TRIP10Q15642 601 aa14.77□□□□□ -0.05
HDAC9-208ENST00000417496 UBXN11Q5T124 520 aa14.77□□□□□ -0.05
HDAC9-208ENST00000417496 TMEM198Q66K66 360 aa14.77□□□□□ -0.05
HDAC9-208ENST00000417496 OTOP3Q7RTS5 596 aa14.77□□□□□ -0.05
HDAC9-208ENST00000417496 RNF148Q8N7C7 305 aa14.77□□□□□ -0.05
HDAC9-208ENST00000417496 SHCBP1Q8NEM2 672 aa14.77□□□□□ -0.05
HDAC9-208ENST00000417496 VPS39Q96JC1 886 aa14.77□□□□□ -0.05
HDAC9-208ENST00000417496 ZNF560Q96MR9 790 aa14.77□□□□□ -0.05
HDAC9-208ENST00000417496 TASP1Q9H6P5 420 aa14.77□□□□□ -0.05
HDAC9-208ENST00000417496 PDHXO00330 501 aa14.76□□□□□ -0.05
HDAC9-208ENST00000417496 TRIM13O60858 407 aa14.76□□□□□ -0.05
HDAC9-208ENST00000417496 MAGEA12P43365 314 aa14.76□□□□□ -0.05
HDAC9-208ENST00000417496 CCNA1P78396 465 aa14.76□□□□□ -0.05
HDAC9-208ENST00000417496 SNX17Q15036 470 aa14.76□□□□□ -0.05
HDAC9-208ENST00000417496 KDELC2Q7Z4H8 507 aa14.76□□□□□ -0.05
HDAC9-208ENST00000417496 PDSS2Q86YH6 399 aa14.76□□□□□ -0.05
HDAC9-208ENST00000417496 FBXW8Q8N3Y1 598 aa14.76□□□□□ -0.05
HDAC9-208ENST00000417496 SPATA22Q8NHS9 363 aa14.76□□□□□ -0.05
HDAC9-208ENST00000417496 NUF2Q9BZD4 464 aa14.76□□□□□ -0.05
HDAC9-208ENST00000417496 CRTAC1Q9NQ79 661 aa14.76□□□□□ -0.05
HDAC9-208ENST00000417496 TCF7L2Q9NQB0 619 aa14.76□□□□□ -0.05
HDAC9-208ENST00000417496 DNAJB4Q9UDY4 337 aa14.76□□□□□ -0.05
HDAC9-208ENST00000417496 IPPQ9Y573 584 aa14.76□□□□□ -0.05
HDAC9-208ENST00000417496 CDY2AQ9Y6F7 541 aa14.76□□□□□ -0.05
HDAC9-208ENST00000417496 CDY1Q9Y6F8 540 aa14.76□□□□□ -0.05
HDAC9-208ENST00000417496 MYBPHLA2RUH7 354 aa14.76□□□□□ -0.05
HDAC9-208ENST00000417496 CYP2B6P20813 491 aa14.76□□□□□ -0.05
HDAC9-208ENST00000417496 NAGLUP54802 743 aa14.76□□□□□ -0.05
HDAC9-208ENST00000417496 NAB1Q13506 487 aa14.76□□□□□ -0.05
HDAC9-208ENST00000417496 KCTD11Q693B1 232 aa14.76□□□□□ -0.05
HDAC9-208ENST00000417496 CLEC14AQ86T13 490 aa14.76□□□□□ -0.05
HDAC9-208ENST00000417496 GBP5Q96PP8 586 aa14.76□□□□□ -0.05
HDAC9-208ENST00000417496 SLC2A13Q96QE2 648 aa14.76□□□□□ -0.05
HDAC9-208ENST00000417496 NR1H4Q96RI1 486 aaPredicted RBP14.76□□□□□ -0.05
HDAC9-208ENST00000417496 CASS4Q9NQ75 786 aa14.76□□□□□ -0.05
HDAC9-208ENST00000417496 NRCAMQ92823 1304 aa14.76□□□□□ -0.05
HDAC9-208ENST00000417496 SBK3P0C264 359 aa14.75□□□□□ -0.05
HDAC9-208ENST00000417496 NUDT2P50583 147 aa14.75□□□□□ -0.05
HDAC9-208ENST00000417496 BTKQ06187 659 aa14.75□□□□□ -0.05
HDAC9-208ENST00000417496 SNAPC2Q13487 334 aa14.75□□□□□ -0.05
HDAC9-208ENST00000417496 SV2CQ496J9 727 aa14.75□□□□□ -0.05
HDAC9-208ENST00000417496 ARL13AQ5H913 290 aaPredicted RBP14.75□□□□□ -0.05
HDAC9-208ENST00000417496 AAGABQ6PD74 315 aa14.75□□□□□ -0.05
HDAC9-208ENST00000417496 ARHGAP36Q6ZRI8 547 aa14.75□□□□□ -0.05
HDAC9-208ENST00000417496 SMG8Q8ND04 991 aaKnown RBP14.75□□□□□ -0.05
HDAC9-208ENST00000417496 SMOQ99835 787 aa14.75□□□□□ -0.05
HDAC9-208ENST00000417496 OMDQ99983 421 aa14.75□□□□□ -0.05
HDAC9-208ENST00000417496 ACE2Q9BYF1 805 aaPredicted RBP14.75□□□□□ -0.05
HDAC9-208ENST00000417496 ZNF408Q9H9D4 720 aa14.75□□□□□ -0.05
HDAC9-208ENST00000417496 ARHGAP26Q9UNA1 814 aa14.75□□□□□ -0.05
HDAC9-208ENST00000417496 ZSWIM8A7E2V4 1837 aa14.75□□□□□ -0.05
HDAC9-208ENST00000417496 H3BNX3 289 aa14.75□□□□□ -0.05
HDAC9-208ENST00000417496 PTGESO14684 152 aa14.75□□□□□ -0.05
HDAC9-208ENST00000417496 AHCYL1O43865 530 aa14.75□□□□□ -0.05
HDAC9-208ENST00000417496 AP1G2O75843 785 aa14.75□□□□□ -0.05
HDAC9-208ENST00000417496 SRGAP2BP0DMP2 458 aa14.75□□□□□ -0.05
HDAC9-208ENST00000417496 GRIA4P48058 902 aa14.75□□□□□ -0.05
HDAC9-208ENST00000417496 CDK7P50613 346 aa14.75□□□□□ -0.05
HDAC9-208ENST00000417496 PPIDQ08752 370 aaKnown RBP14.75□□□□□ -0.05
HDAC9-208ENST00000417496 GSTA3Q16772 222 aa14.75□□□□□ -0.05
HDAC9-208ENST00000417496 FAM219BQ5XKK7 198 aa14.75□□□□□ -0.05
HDAC9-208ENST00000417496 LIMS2Q7Z4I7 341 aa14.75□□□□□ -0.05
HDAC9-208ENST00000417496 SNX32Q86XE0 403 aa14.75□□□□□ -0.05
HDAC9-208ENST00000417496 TMEM151AQ8N4L1 468 aa14.75□□□□□ -0.05
HDAC9-208ENST00000417496 PNPLA1Q8N8W4 532 aa14.75□□□□□ -0.05
HDAC9-208ENST00000417496 KCTD4Q8WVF5 259 aa14.75□□□□□ -0.05
HDAC9-208ENST00000417496 PPP2R3CQ969Q6 453 aa14.75□□□□□ -0.05
HDAC9-208ENST00000417496 PCED1BQ96HM7 432 aa14.75□□□□□ -0.05
HDAC9-208ENST00000417496 MAML3Q96JK9 1138 aa14.75□□□□□ -0.05
HDAC9-208ENST00000417496 RNF181Q9P0P0 153 aa14.75□□□□□ -0.05
HDAC9-208ENST00000417496 OR12D3Q9UGF7 316 aa14.75□□□□□ -0.05
HDAC9-208ENST00000417496 SF3B1O75533 1304 aaKnown RBP eCLIP14.75□□□□□ -0.05
HDAC9-208ENST00000417496 TXNDC9O14530 226 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 CFLARO15519 480 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 MT-CYBP00156 380 aaPredicted RBP14.74□□□□□ -0.05
HDAC9-208ENST00000417496 FAM200BP0CF97 657 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 MYL4P12829 197 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 YBX3P16989 372 aaKnown RBP eCLIP14.74□□□□□ -0.05
HDAC9-208ENST00000417496 GABRB3P28472 473 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 PNPLA4P41247 253 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 MTTPP55157 894 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 SEMA3BQ13214 749 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 CTBP1Q13363 440 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 LSM12Q3MHD2 195 aaKnown RBP14.74□□□□□ -0.05
HDAC9-208ENST00000417496 DENND6AQ8IWF6 608 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 ZMIZ2Q8NF64 920 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 ISL2Q96A47 359 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 ZNF419Q96HQ0 510 aaPredicted RBP14.74□□□□□ -0.05
HDAC9-208ENST00000417496 COLEC11Q9BWP8 271 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 FTHL17Q9BXU8 183 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 KLHL4Q9C0H6 718 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 TKTL2Q9H0I9 626 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 OXSMQ9NWU1 459 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 ZDHHC2Q9UIJ5 367 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 FBXW11Q9UKB1 542 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 CAPN8A6NHC0 703 aa14.74□□□□□ -0.05
HDAC9-208ENST00000417496 STX16-NPEPL1H3BU86 382 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms