RNA–Protein interactions for RNA: ENST00000417043.5

RHBDF1-202, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 816 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-202ENST00000417043 MIIPQ5JXC2 388 aa16.02■□□□□ 0.16
RHBDF1-202ENST00000417043 SPATS2Q86XZ4 545 aaKnown RBP16.02■□□□□ 0.16
RHBDF1-202ENST00000417043 EID2Q8N6I1 236 aa16.02■□□□□ 0.16
RHBDF1-202ENST00000417043 PIP4K2CQ8TBX8 421 aa16.02■□□□□ 0.16
RHBDF1-202ENST00000417043 SAP25Q8TEE9 199 aa16.02■□□□□ 0.16
RHBDF1-202ENST00000417043 SKA1Q96BD8 255 aa16.02■□□□□ 0.16
RHBDF1-202ENST00000417043 TBCBQ99426 244 aa16.02■□□□□ 0.16
RHBDF1-202ENST00000417043 PSMB7Q99436 277 aa16.02■□□□□ 0.16
RHBDF1-202ENST00000417043 NPY6RQ99463 290 aa16.02■□□□□ 0.16
RHBDF1-202ENST00000417043 TKTL2Q9H0I9 626 aa16.02■□□□□ 0.16
RHBDF1-202ENST00000417043 MUC3BQ9H195 1237 aa16.02■□□□□ 0.16
RHBDF1-202ENST00000417043 NDST4Q9H3R1 872 aa16.02■□□□□ 0.16
RHBDF1-202ENST00000417043 WDCPQ9H6R7 721 aa16.02■□□□□ 0.16
RHBDF1-202ENST00000417043 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.02■□□□□ 0.16
RHBDF1-202ENST00000417043 PPM1HQ9ULR3 514 aa16.02■□□□□ 0.16
RHBDF1-202ENST00000417043 RAXQ9Y2V3 346 aa16.02■□□□□ 0.16
RHBDF1-202ENST00000417043 GPSM3Q9Y4H4 160 aa16.02■□□□□ 0.16
RHBDF1-202ENST00000417043 FHOD1Q9Y613 1164 aa16.02■□□□□ 0.16
RHBDF1-202ENST00000417043 ATRXP46100 2492 aa16.01■□□□□ 0.15
RHBDF1-202ENST00000417043 MCF2LO15068 1137 aa16.01■□□□□ 0.15
RHBDF1-202ENST00000417043 PLRG1O43660 514 aaKnown RBP16.01■□□□□ 0.15
RHBDF1-202ENST00000417043 CLDN11O75508 207 aa16.01■□□□□ 0.15
RHBDF1-202ENST00000417043 SRCP12931 536 aa16.01■□□□□ 0.15
RHBDF1-202ENST00000417043 ZNF18P17022 549 aa16.01■□□□□ 0.15
RHBDF1-202ENST00000417043 CXCR3P49682 368 aa16.01■□□□□ 0.15
RHBDF1-202ENST00000417043 SULT1E1P49888 294 aa16.01■□□□□ 0.15
RHBDF1-202ENST00000417043 CDH4P55283 916 aa16.01■□□□□ 0.15
RHBDF1-202ENST00000417043 OXCT1P55809 520 aa16.01■□□□□ 0.15
RHBDF1-202ENST00000417043 NXPH1P58417 271 aa16.01■□□□□ 0.15
RHBDF1-202ENST00000417043 CYP4F3Q08477 520 aa16.01■□□□□ 0.15
RHBDF1-202ENST00000417043 CAMK2BQ13554 666 aa16.01■□□□□ 0.15
RHBDF1-202ENST00000417043 DPCR1Q3MIW9 517 aa16.01■□□□□ 0.15
RHBDF1-202ENST00000417043 C5orf22Q49AR2 442 aa16.01■□□□□ 0.15
RHBDF1-202ENST00000417043 AGBL4Q5VU57 503 aa16.01■□□□□ 0.15
RHBDF1-202ENST00000417043 TAF3Q5VWG9 929 aa16.01■□□□□ 0.15
RHBDF1-202ENST00000417043 PRPF39Q86UA1 669 aaKnown RBP16.01■□□□□ 0.15
RHBDF1-202ENST00000417043 ZNF683Q8IZ20 524 aa16.01■□□□□ 0.15
RHBDF1-202ENST00000417043 SH2D3CQ8N5H7 860 aa16.01■□□□□ 0.15
RHBDF1-202ENST00000417043 ZNF397Q8NF99 534 aaPredicted RBP16.01■□□□□ 0.15
RHBDF1-202ENST00000417043 FAM131CQ96AQ9 280 aa16.01■□□□□ 0.15
RHBDF1-202ENST00000417043 TUBGCP2Q9BSJ2 902 aa16.01■□□□□ 0.15
RHBDF1-202ENST00000417043 PDCL3Q9H2J4 239 aa16.01■□□□□ 0.15
RHBDF1-202ENST00000417043 GDF3Q9NR23 364 aa16.01■□□□□ 0.15
RHBDF1-202ENST00000417043 ARHGEF38Q9NXL2 777 aa16.01■□□□□ 0.15
RHBDF1-202ENST00000417043 MPP6Q9NZW5 540 aa16.01■□□□□ 0.15
RHBDF1-202ENST00000417043 TBC1D30Q9Y2I9 924 aa16.01■□□□□ 0.15
RHBDF1-202ENST00000417043 DOCK4Q8N1I0 1966 aa16■□□□□ 0.15
RHBDF1-202ENST00000417043 MYLKQ15746 1914 aa16■□□□□ 0.15
RHBDF1-202ENST00000417043 A0A0D9SEW6 157 aa16■□□□□ 0.15
RHBDF1-202ENST00000417043 SMAD6O43541 496 aaKnown RBP16■□□□□ 0.15
RHBDF1-202ENST00000417043 LDOC1O95751 146 aaPredicted RBP16■□□□□ 0.15
RHBDF1-202ENST00000417043 CTSLP07711 333 aa16■□□□□ 0.15
RHBDF1-202ENST00000417043 CYP11B1P15538 503 aa16■□□□□ 0.15
RHBDF1-202ENST00000417043 RRM1P23921 792 aa16■□□□□ 0.15
RHBDF1-202ENST00000417043 VASPP50552 380 aaPredicted RBP16■□□□□ 0.15
RHBDF1-202ENST00000417043 SNX16P57768 344 aa16■□□□□ 0.15
RHBDF1-202ENST00000417043 TAS2R38P59533 333 aa16■□□□□ 0.15
RHBDF1-202ENST00000417043 DEUP1Q05D60 604 aa16■□□□□ 0.15
RHBDF1-202ENST00000417043 SMAD1Q15797 465 aaKnown RBP16■□□□□ 0.15
RHBDF1-202ENST00000417043 KLHDC7AQ5VTJ3 777 aa16■□□□□ 0.15
RHBDF1-202ENST00000417043 NAPEPLDQ6IQ20 393 aa16■□□□□ 0.15
RHBDF1-202ENST00000417043 TRNP1Q6NT89 227 aa16■□□□□ 0.15
RHBDF1-202ENST00000417043 LINGO4Q6UY18 593 aa16■□□□□ 0.15
RHBDF1-202ENST00000417043 TFAP2DQ7Z6R9 452 aa16■□□□□ 0.15
RHBDF1-202ENST00000417043 DSG4Q86SJ6 1040 aa16■□□□□ 0.15
RHBDF1-202ENST00000417043 GALNT15Q8N3T1 639 aa16■□□□□ 0.15
RHBDF1-202ENST00000417043 TMEM35BQ8NCS4 154 aa16■□□□□ 0.15
RHBDF1-202ENST00000417043 HNRNPLLQ8WVV9 542 aaKnown RBP16■□□□□ 0.15
RHBDF1-202ENST00000417043 KLK6Q92876 244 aa16■□□□□ 0.15
RHBDF1-202ENST00000417043 CNDP2Q96KP4 475 aaKnown RBP16■□□□□ 0.15
RHBDF1-202ENST00000417043 CLSTN2Q9H4D0 955 aa16■□□□□ 0.15
RHBDF1-202ENST00000417043 CAAP1Q9H8G2 361 aa16■□□□□ 0.15
RHBDF1-202ENST00000417043 COL5A1P20908 1838 aaPredicted RBP15.99■□□□□ 0.15
RHBDF1-202ENST00000417043 GOLGA8SH3BPF8 625 aa15.99■□□□□ 0.15
RHBDF1-202ENST00000417043 PES1O00541 588 aaKnown RBP15.99■□□□□ 0.15
RHBDF1-202ENST00000417043 ENC1O14682 589 aa15.99■□□□□ 0.15
RHBDF1-202ENST00000417043 ENDOD1O94919 500 aa15.99■□□□□ 0.15
RHBDF1-202ENST00000417043 RHOCP08134 193 aa15.99■□□□□ 0.15
RHBDF1-202ENST00000417043 GLDCP23378 1020 aa15.99■□□□□ 0.15
RHBDF1-202ENST00000417043 EPHA8P29322 1005 aaPredicted RBP15.99■□□□□ 0.15
RHBDF1-202ENST00000417043 BPIFB4P59827 614 aa15.99■□□□□ 0.15
RHBDF1-202ENST00000417043 COL28A1Q2UY09 1125 aa15.99■□□□□ 0.15
RHBDF1-202ENST00000417043 INAVAQ3KP66 663 aa15.99■□□□□ 0.15
RHBDF1-202ENST00000417043 SLC45A4Q5BKX6 768 aa15.99■□□□□ 0.15
RHBDF1-202ENST00000417043 ARTNQ5T4W7 220 aa15.99■□□□□ 0.15
RHBDF1-202ENST00000417043 FAM102AQ5T9C2 384 aaPredicted RBP15.99■□□□□ 0.15
RHBDF1-202ENST00000417043 FAM46CQ5VWP2 391 aa15.99■□□□□ 0.15
RHBDF1-202ENST00000417043 XYLT1Q86Y38 959 aa15.99■□□□□ 0.15
RHBDF1-202ENST00000417043 ATP11CQ8NB49 1132 aa15.99■□□□□ 0.15
RHBDF1-202ENST00000417043 NT5C3BQ969T7 300 aa15.99■□□□□ 0.15
RHBDF1-202ENST00000417043 C18orf8Q96DM3 657 aa15.99■□□□□ 0.15
RHBDF1-202ENST00000417043 PPP1R9BQ96SB3 815 aa15.99■□□□□ 0.15
RHBDF1-202ENST00000417043 MYOCQ99972 504 aa15.99■□□□□ 0.15
RHBDF1-202ENST00000417043 SAMSN1Q9NSI8 373 aaKnown RBP15.99■□□□□ 0.15
RHBDF1-202ENST00000417043 VPS51Q9UID3 782 aa15.99■□□□□ 0.15
RHBDF1-202ENST00000417043 BPTFQ12830 3046 aa15.99■□□□□ 0.15
RHBDF1-202ENST00000417043 ASXL3Q9C0F0 2248 aa15.98■□□□□ 0.15
RHBDF1-202ENST00000417043 DRGXA6NNA5 263 aa15.98■□□□□ 0.15
RHBDF1-202ENST00000417043 C1QTNF3-AMACRE9PGA6 284 aa15.98■□□□□ 0.15
RHBDF1-202ENST00000417043 SRGAP2O75044 1071 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms