RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 ZNF806P0C7X5 589 aa13.46□□□□□ -0.25
SSB-203ENST00000413002 MYBL1P10243 752 aa13.46□□□□□ -0.25
SSB-203ENST00000413002 SRCP12931 536 aa13.46□□□□□ -0.25
SSB-203ENST00000413002 EPHB2P29323 1055 aa13.46□□□□□ -0.25
SSB-203ENST00000413002 MIPP30301 263 aa13.46□□□□□ -0.25
SSB-203ENST00000413002 GALCP54803 685 aa13.46□□□□□ -0.25
SSB-203ENST00000413002 NRG1Q02297 640 aaPredicted RBP13.46□□□□□ -0.25
SSB-203ENST00000413002 GNA12Q03113 381 aa13.46□□□□□ -0.25
SSB-203ENST00000413002 TRIM14Q14142 442 aa13.46□□□□□ -0.25
SSB-203ENST00000413002 RSPO4Q2I0M5 234 aaPredicted RBP13.46□□□□□ -0.25
SSB-203ENST00000413002 ACBD5Q5T8D3 534 aaPredicted RBP13.46□□□□□ -0.25
SSB-203ENST00000413002 IL31Q6EBC2 164 aa13.46□□□□□ -0.25
SSB-203ENST00000413002 SH2D3CQ8N5H7 860 aa13.46□□□□□ -0.25
SSB-203ENST00000413002 KDM1BQ8NB78 822 aa13.46□□□□□ -0.25
SSB-203ENST00000413002 NETO2Q8NC67 525 aa13.46□□□□□ -0.25
SSB-203ENST00000413002 TRIM11Q96F44 468 aa13.46□□□□□ -0.25
SSB-203ENST00000413002 PPP1R9BQ96SB3 815 aa13.46□□□□□ -0.25
SSB-203ENST00000413002 C2orf49Q9BVC5 232 aaPredicted RBP13.46□□□□□ -0.25
SSB-203ENST00000413002 NUP85Q9BW27 656 aa13.46□□□□□ -0.25
SSB-203ENST00000413002 TNKS2Q9H2K2 1166 aa13.46□□□□□ -0.25
SSB-203ENST00000413002 DHX35Q9H5Z1 703 aaKnown RBP13.46□□□□□ -0.25
SSB-203ENST00000413002 VPS45Q9NRW7 570 aa13.46□□□□□ -0.25
SSB-203ENST00000413002 ABHD10Q9NUJ1 306 aa13.46□□□□□ -0.25
SSB-203ENST00000413002 AP4E1Q9UPM8 1137 aa13.46□□□□□ -0.25
SSB-203ENST00000413002 PCDHGA5Q9Y5G8 931 aa13.46□□□□□ -0.25
SSB-203ENST00000413002 SCINQ9Y6U3 715 aa13.46□□□□□ -0.25
SSB-203ENST00000413002 SPAG17Q6Q759 2223 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 THADAQ6YHU6 1953 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 A0A1W2PP55 124 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 TARSL2A2RTX5 802 aaKnown RBP13.45□□□□□ -0.26
SSB-203ENST00000413002 FAM47DPA6NHR8 397 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 ATP9BO43861 1147 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 LRP3O75074 770 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 LRCH4O75427 683 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 ZMPSTE24O75844 475 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 RNF8O76064 485 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 IL1BP01584 269 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 CYP1A2P05177 515 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 TPM1P09493 284 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 DESP17661 470 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 L1CAMP32004 1257 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 SLC8A1P32418 973 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 KRT83P78385 493 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 IRX4P78413 519 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 TBX2Q13207 712 aaPredicted RBP13.45□□□□□ -0.26
SSB-203ENST00000413002 SEMA3BQ13214 749 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 ARID5BQ14865 1188 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 CST6Q15828 149 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 AASDHQ4L235 1098 aaPredicted RBP13.45□□□□□ -0.26
SSB-203ENST00000413002 KCNT1Q5JUK3 1230 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 TXNRD3NBQ6F5E7 133 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 SARM1Q6SZW1 724 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 CYP4V2Q6ZWL3 525 aaPredicted RBP13.45□□□□□ -0.26
SSB-203ENST00000413002 CPNE8Q86YQ8 564 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 RGL4Q8IZJ4 473 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 GPR161Q8N6U8 529 aaKnown RBP13.45□□□□□ -0.26
SSB-203ENST00000413002 C12orf50Q8NA57 414 aaPredicted RBP13.45□□□□□ -0.26
SSB-203ENST00000413002 DCAF4L2Q8NA75 395 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 KCTD15Q96SI1 283 aaPredicted RBP13.45□□□□□ -0.26
SSB-203ENST00000413002 SNRNP25Q9BV90 132 aaKnown RBP13.45□□□□□ -0.26
SSB-203ENST00000413002 PABPC3Q9H361 631 aaKnown RBP13.45□□□□□ -0.26
SSB-203ENST00000413002 DEF6Q9H4E7 631 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 C6orf106Q9H6K1 298 aaPredicted RBP13.45□□□□□ -0.26
SSB-203ENST00000413002 MRPL47Q9HD33 250 aaKnown RBP13.45□□□□□ -0.26
SSB-203ENST00000413002 SPTLC3Q9NUV7 552 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 TMEM248Q9NWD8 314 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 ZNHIT6Q9NWK9 470 aaKnown RBP13.45□□□□□ -0.26
SSB-203ENST00000413002 FBXL12Q9NXK8 326 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 SARDHQ9UL12 918 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 NENFQ9UMX5 172 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 CEP250Q9BV73 2442 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 GON4LQ3T8J9 2241 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 CKAP5Q14008 2032 aa13.45□□□□□ -0.26
SSB-203ENST00000413002 RNF103O00237 685 aa13.44□□□□□ -0.26
SSB-203ENST00000413002 AKR1B10O60218 316 aa13.44□□□□□ -0.26
SSB-203ENST00000413002 PRPSAP2O60256 369 aa13.44□□□□□ -0.26
SSB-203ENST00000413002 RNASEH1O60930 286 aaKnown RBP13.44□□□□□ -0.26
SSB-203ENST00000413002 RNASEH2AO75792 299 aaKnown RBP13.44□□□□□ -0.26
SSB-203ENST00000413002 CFIP05156 583 aa13.44□□□□□ -0.26
SSB-203ENST00000413002 IL1R2P27930 398 aa13.44□□□□□ -0.26
SSB-203ENST00000413002 OXTRP30559 389 aa13.44□□□□□ -0.26
SSB-203ENST00000413002 DNA2P51530 1060 aa13.44□□□□□ -0.26
SSB-203ENST00000413002 ARF5P84085 180 aa13.44□□□□□ -0.26
SSB-203ENST00000413002 LMNB2Q03252 620 aa13.44□□□□□ -0.26
SSB-203ENST00000413002 TSR1Q2NL82 804 aaKnown RBP13.44□□□□□ -0.26
SSB-203ENST00000413002 SMTNL2Q2TAL5 461 aa13.44□□□□□ -0.26
SSB-203ENST00000413002 ASTE1Q2TB18 679 aaPredicted RBP13.44□□□□□ -0.26
SSB-203ENST00000413002 TRIM61Q5EBN2 209 aa13.44□□□□□ -0.26
SSB-203ENST00000413002 PPP6R3Q5H9R7 873 aaPredicted RBP13.44□□□□□ -0.26
SSB-203ENST00000413002 ERMARDQ5T6L9 678 aa13.44□□□□□ -0.26
SSB-203ENST00000413002 ZNF354CQ86Y25 554 aa13.44□□□□□ -0.26
SSB-203ENST00000413002 SYT12Q8IV01 421 aa13.44□□□□□ -0.26
SSB-203ENST00000413002 AADATQ8N5Z0 425 aa13.44□□□□□ -0.26
SSB-203ENST00000413002 CHST14Q8NCH0 376 aa13.44□□□□□ -0.26
SSB-203ENST00000413002 FNIP1Q8TF40 1166 aa13.44□□□□□ -0.26
SSB-203ENST00000413002 SNX19Q92543 992 aa13.44□□□□□ -0.26
SSB-203ENST00000413002 ARHGEF2Q92974 986 aaKnown RBP13.44□□□□□ -0.26
SSB-203ENST00000413002 ZNF419Q96HQ0 510 aaPredicted RBP13.44□□□□□ -0.26
SSB-203ENST00000413002 EPAS1Q99814 870 aa13.44□□□□□ -0.26
SSB-203ENST00000413002 KLC2Q9H0B6 622 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms