RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 CHURC1-FNTBB4DL54 471 aa30.02■■■□□ 2.4
USP42-202ENST00000404008 NPC1O15118 1278 aa30.02■■■□□ 2.4
USP42-202ENST00000404008 SNAP91O60641 907 aa30.02■■■□□ 2.4
USP42-202ENST00000404008 GPR37L1O60883 481 aa30.02■■■□□ 2.4
USP42-202ENST00000404008 ZMPSTE24O75844 475 aa30.02■■■□□ 2.4
USP42-202ENST00000404008 KRT10P13645 584 aa30.02■■■□□ 2.4
USP42-202ENST00000404008 PTPN7P35236 360 aa30.02■■■□□ 2.4
USP42-202ENST00000404008 SERINC3Q13530 473 aa30.02■■■□□ 2.4
USP42-202ENST00000404008 ZNF234Q14588 700 aa30.02■■■□□ 2.4
USP42-202ENST00000404008 PKN3Q6P5Z2 889 aa30.02■■■□□ 2.4
USP42-202ENST00000404008 C17orf53Q8N3J3 647 aaPredicted RBP30.02■■■□□ 2.4
USP42-202ENST00000404008 ALLCQ8N6M5 410 aa30.02■■■□□ 2.4
USP42-202ENST00000404008 PLD5Q8N7P1 536 aa30.02■■■□□ 2.4
USP42-202ENST00000404008 NETO2Q8NC67 525 aa30.02■■■□□ 2.4
USP42-202ENST00000404008 MRGPRX3Q96LB0 322 aa30.02■■■□□ 2.4
USP42-202ENST00000404008 ACOX2Q99424 681 aa30.02■■■□□ 2.4
USP42-202ENST00000404008 TLR10Q9BXR5 811 aa30.02■■■□□ 2.4
USP42-202ENST00000404008 PLA2G4CQ9UP65 541 aa30.02■■■□□ 2.4
USP42-202ENST00000404008 CBX4O00257 560 aa30.01■■■□□ 2.39
USP42-202ENST00000404008 MFSD11O43934 449 aa30.01■■■□□ 2.39
USP42-202ENST00000404008 SRPRAP08240 638 aaKnown RBP30.01■■■□□ 2.39
USP42-202ENST00000404008 LLGL1Q15334 1064 aa30.01■■■□□ 2.39
USP42-202ENST00000404008 HSF5Q4G112 596 aaPredicted RBP30.01■■■□□ 2.39
USP42-202ENST00000404008 TRMT11Q7Z4G4 463 aaKnown RBP30.01■■■□□ 2.39
USP42-202ENST00000404008 TP53INP2Q8IXH6 220 aa30.01■■■□□ 2.39
USP42-202ENST00000404008 SLC35F6Q8N357 371 aa30.01■■■□□ 2.39
USP42-202ENST00000404008 TMEM105Q8N8V8 129 aa30.01■■■□□ 2.39
USP42-202ENST00000404008 MYO19Q96H55 970 aa30.01■■■□□ 2.39
USP42-202ENST00000404008 IER2Q9BTL4 223 aa30.01■■■□□ 2.39
USP42-202ENST00000404008 JRKLQ9Y4A0 524 aa30.01■■■□□ 2.39
USP42-202ENST00000404008 ARHGAP42A6NI28 874 aa30■■■□□ 2.39
USP42-202ENST00000404008 APOL1O14791 398 aa30■■■□□ 2.39
USP42-202ENST00000404008 KDELR3O43731 214 aa30■■■□□ 2.39
USP42-202ENST00000404008 KLF8O95600 359 aaPredicted RBP30■■■□□ 2.39
USP42-202ENST00000404008 ZFXP17010 805 aaPredicted RBP30■■■□□ 2.39
USP42-202ENST00000404008 STK19P49842 368 aaPredicted RBP30■■■□□ 2.39
USP42-202ENST00000404008 PAPOLAP51003 745 aaKnown RBP30■■■□□ 2.39
USP42-202ENST00000404008 ARF5P84085 180 aa30■■■□□ 2.39
USP42-202ENST00000404008 ZNF211Q13398 564 aaPredicted RBP30■■■□□ 2.39
USP42-202ENST00000404008 ENPP2Q13822 863 aa30■■■□□ 2.39
USP42-202ENST00000404008 TFDP2Q14188 446 aa30■■■□□ 2.39
USP42-202ENST00000404008 KAZNQ674X7 775 aa30■■■□□ 2.39
USP42-202ENST00000404008 AADACL2Q6P093 401 aa30■■■□□ 2.39
USP42-202ENST00000404008 CHPFQ8IZ52 775 aa30■■■□□ 2.39
USP42-202ENST00000404008 RPL10LQ96L21 214 aaKnown RBP30■■■□□ 2.39
USP42-202ENST00000404008 CACNA2D2Q9NY47 1150 aa30■■■□□ 2.39
USP42-202ENST00000404008 SLC25A13Q9UJS0 675 aa30■■■□□ 2.39
USP42-202ENST00000404008 HPCAL4Q9UM19 191 aa30■■■□□ 2.39
USP42-202ENST00000404008 PRR33A8MZF0 331 aa29.99■■■□□ 2.39
USP42-202ENST00000404008 DFFAO00273 331 aa29.99■■■□□ 2.39
USP42-202ENST00000404008 MSNP26038 577 aaKnown RBP29.99■■■□□ 2.39
USP42-202ENST00000404008 IL12RB1P42701 662 aa29.99■■■□□ 2.39
USP42-202ENST00000404008 VASPP50552 380 aaPredicted RBP29.99■■■□□ 2.39
USP42-202ENST00000404008 GBE1Q04446 702 aa29.99■■■□□ 2.39
USP42-202ENST00000404008 ADCY2Q08462 1091 aa29.99■■■□□ 2.39
USP42-202ENST00000404008 FNDC3BQ53EP0 1204 aaKnown RBP29.99■■■□□ 2.39
USP42-202ENST00000404008 ZNF354CQ86Y25 554 aa29.99■■■□□ 2.39
USP42-202ENST00000404008 KDM1BQ8NB78 822 aa29.99■■■□□ 2.39
USP42-202ENST00000404008 TXNDC5Q8NBS9 432 aaKnown RBP29.99■■■□□ 2.39
USP42-202ENST00000404008 OSBPL8Q9BZF1 889 aa29.99■■■□□ 2.39
USP42-202ENST00000404008 HS3ST2Q9Y278 367 aa29.99■■■□□ 2.39
USP42-202ENST00000404008 EFR3BQ9Y2G0 817 aa29.99■■■□□ 2.39
USP42-202ENST00000404008 CXorf51AA0A1B0GTR3 108 aa29.98■■■□□ 2.39
USP42-202ENST00000404008 DLL1O00548 723 aa29.98■■■□□ 2.39
USP42-202ENST00000404008 CST8O60676 142 aa29.98■■■□□ 2.39
USP42-202ENST00000404008 ADAM23O75077 832 aa29.98■■■□□ 2.39
USP42-202ENST00000404008 ATG13O75143 517 aa29.98■■■□□ 2.39
USP42-202ENST00000404008 NTSR1P30989 418 aa29.98■■■□□ 2.39
USP42-202ENST00000404008 CETN2P41208 172 aa29.98■■■□□ 2.39
USP42-202ENST00000404008 DYNLT1P63172 113 aa29.98■■■□□ 2.39
USP42-202ENST00000404008 MTAPQ13126 283 aa29.98■■■□□ 2.39
USP42-202ENST00000404008 RETSATQ6NUM9 610 aa29.98■■■□□ 2.39
USP42-202ENST00000404008 CCDC33Q8N5R6 958 aa29.98■■■□□ 2.39
USP42-202ENST00000404008 HERPUD2Q9BSE4 406 aa29.98■■■□□ 2.39
USP42-202ENST00000404008 C1QTNF1Q9BXJ1 281 aa29.98■■■□□ 2.39
USP42-202ENST00000404008 HEMGNQ9BXL5 484 aa29.98■■■□□ 2.39
USP42-202ENST00000404008 TMEM245Q9H330 911 aa29.98■■■□□ 2.39
USP42-202ENST00000404008 EIF2AK3Q9NZJ5 1116 aaKnown RBP29.98■■■□□ 2.39
USP42-202ENST00000404008 MMP17Q9ULZ9 603 aa29.98■■■□□ 2.39
USP42-202ENST00000404008 STON1Q9Y6Q2 735 aa29.98■■■□□ 2.39
USP42-202ENST00000404008 CKAP5Q14008 2032 aa29.97■■■□□ 2.39
USP42-202ENST00000404008 SHROOM3Q8TF72 1996 aa29.97■■■□□ 2.39
USP42-202ENST00000404008 ZDBF2Q9HCK1 2354 aa29.97■■■□□ 2.39
USP42-202ENST00000404008 SGK1O00141 431 aa29.97■■■□□ 2.39
USP42-202ENST00000404008 ENC1O14682 589 aa29.97■■■□□ 2.39
USP42-202ENST00000404008 ST8SIA6P61647 398 aa29.97■■■□□ 2.39
USP42-202ENST00000404008 SLC10A2Q12908 348 aaPredicted RBP29.97■■■□□ 2.39
USP42-202ENST00000404008 SERPINA13PQ6UXR4 307 aa29.97■■■□□ 2.39
USP42-202ENST00000404008 LINGO4Q6UY18 593 aa29.97■■■□□ 2.39
USP42-202ENST00000404008 SPEM1Q8N4L4 309 aa29.97■■■□□ 2.39
USP42-202ENST00000404008 GABRG3Q99928 467 aa29.97■■■□□ 2.39
USP42-202ENST00000404008 DTLQ9NZJ0 730 aa29.97■■■□□ 2.39
USP42-202ENST00000404008 SLCO3A1Q9UIG8 710 aa29.97■■■□□ 2.39
USP42-202ENST00000404008 ZKSCAN5Q9Y2L8 839 aa29.97■■■□□ 2.39
USP42-202ENST00000404008 WASH3PC4AMC7 463 aa29.96■■■□□ 2.39
USP42-202ENST00000404008 MT-CO1P00395 513 aa29.96■■■□□ 2.39
USP42-202ENST00000404008 PRKCHP24723 683 aa29.96■■■□□ 2.39
USP42-202ENST00000404008 WASP42768 502 aa29.96■■■□□ 2.39
USP42-202ENST00000404008 GALNT2Q10471 571 aa29.96■■■□□ 2.39
USP42-202ENST00000404008 TMEM31Q5JXX7 168 aa29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms