RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	HYI	Q5T013	277 aa		7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	PIK3R6	Q5UE93	754 aa		7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	C4orf50	Q6ZRC1	276 aa		7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	TMEM150A	Q86TG1	271 aa		7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	RASSF3	Q86WH2	238 aa		7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	PTRH1	Q86Y79	214 aa	Known RBP	7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	SYT12	Q8IV01	421 aa		7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	IGDCC3	Q8IVU1	814 aa		7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	SCN4B	Q8IWT1	228 aa		7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	RBM12B	Q8IXT5	1001 aa	Known RBP	7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	AHI1	Q8N157	1196 aa		7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	PPM1K	Q8N3J5	372 aa		7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	MDGA1	Q8NFP4	955 aa		7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	CEP76	Q8TAP6	659 aa		7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	SPATA18	Q8TC71	538 aa		7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	CACTIN	Q8WUQ7	758 aa	Known RBP	7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	FUBP3	Q96I24	572 aa	Known RBP eCLIP	7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	ZSCAN31	Q96LW9	406 aa	Predicted RBP	7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	AK8	Q96MA6	479 aa		7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	PLIN2	Q99541	437 aa		7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	ACBD6	Q9BR61	282 aa		7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	ORAI3	Q9BRQ5	295 aa		7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	MMTAG2	Q9BU76	263 aa	Known RBP	7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	CD244	Q9BZW8	370 aa		7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	HAPLN2	Q9GZV7	340 aa		7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	FBRSL1	Q9HCM7	1045 aa	Known RBP	7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	POLR3B	Q9NW08	1133 aa	Predicted RBP	7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	DDX43	Q9NXZ2	648 aa	Known RBP	7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	DPP3	Q9NY33	737 aa		7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	AGO2	Q9UKV8	859 aa	Known RBP	7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	MMP17	Q9ULZ9	603 aa		7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	ARHGAP26	Q9UNA1	814 aa		7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	EXOC7	Q9UPT5	735 aa		7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	PRKAB1	Q9Y478	270 aa		7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	PCDHB6	Q9Y5E3	794 aa		7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	CEP295	Q9C0D2	2601 aa		7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	CHD6	Q8TD26	2715 aa		7.18	□□□□□ -1.26
CEACAM1-208	ENST00000403461	PATE3	B3GLJ2	98 aa		7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	AP5Z1	O43299	807 aa		7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	FAM189A1	O60320	539 aa		7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	APOD	P05090	189 aa		7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	HDC	P19113	662 aa		7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	EIF2D	P41214	584 aa	Known RBP	7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	MASP1	P48740	699 aa		7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	LHX1	P48742	406 aa		7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	GPR15	P49685	360 aa		7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	ACOT2	P49753	483 aa		7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	TOB1	P50616	345 aa	Predicted RBP	7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	MECP2	P51608	486 aa	Known RBP	7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	IRX4	P78413	519 aa		7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	ATP2C1	P98194	919 aa	Predicted RBP	7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	TFAM	Q00059	246 aa	Known RBP	7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	GFPT1	Q06210	699 aa	Predicted RBP	7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	MYO1E	Q12965	1108 aa		7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	DHX8	Q14562	1220 aa	Known RBP	7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	MAPRE1	Q15691	268 aa	Known RBP	7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	ARHGAP44	Q17R89	818 aa		7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	CFAP221	Q4G0U5	840 aa		7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	TMEM119	Q4V9L6	283 aa		7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	SDHAF4	Q5VUM1	108 aa		7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	ARL6IP4	Q66PJ3	421 aa	Known RBP	7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	LRSAM1	Q6UWE0	723 aa		7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	TRMT11	Q7Z4G4	463 aa	Known RBP	7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	DDX42	Q86XP3	938 aa	Known RBP eCLIP	7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	KIF18B	Q86Y91	864 aa		7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	EFCAB13	Q8IY85	973 aa		7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	CCDC33	Q8N5R6	958 aa		7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	KIAA1958	Q8N8K9	716 aa		7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	ARL14EP	Q8N8R7	260 aa	Predicted RBP	7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	POMGNT1	Q8WZA1	660 aa		7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	TOE1	Q96GM8	510 aa	Known RBP	7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	CEP295NL	Q96MC4	621 aa		7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	REEP2	Q9BRK0	252 aa		7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	YIPF4	Q9BSR8	244 aa		7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	GTPBP2	Q9BX10	602 aa	Known RBP	7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	TRPM5	Q9NZQ8	1165 aa		7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	WASF3	Q9UPY6	502 aa		7.17	□□□□□ -1.26
CEACAM1-208	ENST00000403461	COL4A2	P08572	1712 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	SPAAR	A0A1B0GVQ0	90 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	CBX4	O00257	560 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	CDX4	O14627	284 aa	Predicted RBP	7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	BUB1B	O60566	1050 aa	Predicted RBP	7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	OPHN1	O60890	802 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	KLF8	O95600	359 aa	Predicted RBP	7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	BMP15	O95972	392 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	LTF	P02788	710 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	KRT1	P04264	644 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	KRT19	P08727	400 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	ENG	P17813	658 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	BCKDHB	P21953	392 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	CYP2F1	P24903	491 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	P2RY2	P41231	377 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	PPP3CC	P48454	512 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	ZNF131	P52739	623 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	RBP5	P82980	135 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	GTF2B	Q00403	316 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	ST3GAL1	Q11201	340 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	REST	Q13127	1097 aa		7.16	□□□□□ -1.26
CEACAM1-208	ENST00000403461	DUOXA1	Q1HG43	343 aa		7.16	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms