RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 DMTF1Q9Y222 760 aa12.71□□□□□ -0.37
PRAME-204ENST00000403441 ASXL3Q9C0F0 2248 aa12.7□□□□□ -0.38
PRAME-204ENST00000403441 KCNU1A8MYU2 1149 aa12.7□□□□□ -0.38
PRAME-204ENST00000403441 C1QTNF3-AMACRE9PGA6 284 aa12.7□□□□□ -0.38
PRAME-204ENST00000403441 RTN2O75298 545 aa12.7□□□□□ -0.38
PRAME-204ENST00000403441 TRUB2O95900 331 aaKnown RBP12.7□□□□□ -0.38
PRAME-204ENST00000403441 VAV1P15498 845 aa12.7□□□□□ -0.38
PRAME-204ENST00000403441 CKMT2P17540 419 aa12.7□□□□□ -0.38
PRAME-204ENST00000403441 DRD3P35462 400 aa12.7□□□□□ -0.38
PRAME-204ENST00000403441 EIF2S3P41091 472 aaKnown RBP12.7□□□□□ -0.38
PRAME-204ENST00000403441 KRT31Q15323 416 aa12.7□□□□□ -0.38
PRAME-204ENST00000403441 ACCSLQ4AC99 568 aa12.7□□□□□ -0.38
PRAME-204ENST00000403441 SETMARQ53H47 684 aaPredicted RBP12.7□□□□□ -0.38
PRAME-204ENST00000403441 HS1BP3Q53T59 392 aa12.7□□□□□ -0.38
PRAME-204ENST00000403441 HSP90AA4PQ58FG1 418 aa12.7□□□□□ -0.38
PRAME-204ENST00000403441 DENND1BQ6P3S1 775 aa12.7□□□□□ -0.38
PRAME-204ENST00000403441 CIR1Q86X95 450 aaPredicted RBP12.7□□□□□ -0.38
PRAME-204ENST00000403441 CCAR2Q8N163 923 aaKnown RBP12.7□□□□□ -0.38
PRAME-204ENST00000403441 RNF34Q969K3 372 aa12.7□□□□□ -0.38
PRAME-204ENST00000403441 PLCB1Q9NQ66 1216 aa12.7□□□□□ -0.38
PRAME-204ENST00000403441 FANCLQ9NW38 375 aa12.7□□□□□ -0.38
PRAME-204ENST00000403441 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.7□□□□□ -0.38
PRAME-204ENST00000403441 LIMA1Q9UHB6 759 aaKnown RBP12.7□□□□□ -0.38
PRAME-204ENST00000403441 CYTH4Q9UIA0 394 aa12.7□□□□□ -0.38
PRAME-204ENST00000403441 SLC25A13Q9UJS0 675 aa12.7□□□□□ -0.38
PRAME-204ENST00000403441 HELZ2Q9BYK8 2649 aaKnown RBP12.7□□□□□ -0.38
PRAME-204ENST00000403441 E5RJQ4 531 aa12.69□□□□□ -0.38
PRAME-204ENST00000403441 THAP12O43422 761 aa12.69□□□□□ -0.38
PRAME-204ENST00000403441 PLRG1O43660 514 aaKnown RBP12.69□□□□□ -0.38
PRAME-204ENST00000403441 LETM1O95202 739 aaPredicted RBP12.69□□□□□ -0.38
PRAME-204ENST00000403441 IGLV3-25P01717 112 aa12.69□□□□□ -0.38
PRAME-204ENST00000403441 ITPKBP27987 946 aa12.69□□□□□ -0.38
PRAME-204ENST00000403441 MAT2AP31153 395 aaKnown RBP12.69□□□□□ -0.38
PRAME-204ENST00000403441 CCR1P32246 355 aa12.69□□□□□ -0.38
PRAME-204ENST00000403441 NUMBP49757 651 aa12.69□□□□□ -0.38
PRAME-204ENST00000403441 PLK1P53350 603 aa12.69□□□□□ -0.38
PRAME-204ENST00000403441 CDK17Q00537 523 aa12.69□□□□□ -0.38
PRAME-204ENST00000403441 C19orf57Q0VDD7 668 aa12.69□□□□□ -0.38
PRAME-204ENST00000403441 BNIP3Q12983 259 aa12.69□□□□□ -0.38
PRAME-204ENST00000403441 MTA1Q13330 715 aa12.69□□□□□ -0.38
PRAME-204ENST00000403441 STAT4Q14765 748 aa12.69□□□□□ -0.38
PRAME-204ENST00000403441 RTP5Q14D33 572 aa12.69□□□□□ -0.38
PRAME-204ENST00000403441 KLHDC7AQ5VTJ3 777 aa12.69□□□□□ -0.38
PRAME-204ENST00000403441 CAVIN1Q6NZI2 390 aaKnown RBP12.69□□□□□ -0.38
PRAME-204ENST00000403441 TRIM69Q86WT6 500 aa12.69□□□□□ -0.38
PRAME-204ENST00000403441 SPATS2Q86XZ4 545 aaKnown RBP12.69□□□□□ -0.38
PRAME-204ENST00000403441 FAM71AQ8IYT1 594 aa12.69□□□□□ -0.38
PRAME-204ENST00000403441 FRS2Q8WU20 508 aa12.69□□□□□ -0.38
PRAME-204ENST00000403441 ZNF606Q8WXB4 792 aa12.69□□□□□ -0.38
PRAME-204ENST00000403441 RPRD1AQ96P16 312 aaPredicted RBP12.69□□□□□ -0.38
PRAME-204ENST00000403441 SLC4A5Q9BY07 1137 aa12.69□□□□□ -0.38
PRAME-204ENST00000403441 DDIT4Q9NX09 232 aa12.69□□□□□ -0.38
PRAME-204ENST00000403441 DNAJC12Q9UKB3 198 aa12.69□□□□□ -0.38
PRAME-204ENST00000403441 PCDHGC3Q9UN70 934 aa12.69□□□□□ -0.38
PRAME-204ENST00000403441 SYNJ2BP-COX16A0A087WUM0 186 aa12.68□□□□□ -0.38
PRAME-204ENST00000403441 PRAMEF26H0Y7S4 382 aa12.68□□□□□ -0.38
PRAME-204ENST00000403441 TK2O00142 265 aa12.68□□□□□ -0.38
PRAME-204ENST00000403441 ALOX15BO15296 676 aa12.68□□□□□ -0.38
PRAME-204ENST00000403441 TLX3O43711 291 aaPredicted RBP12.68□□□□□ -0.38
PRAME-204ENST00000403441 GLDCP23378 1020 aa12.68□□□□□ -0.38
PRAME-204ENST00000403441 GNA15P30679 374 aa12.68□□□□□ -0.38
PRAME-204ENST00000403441 CLCN1P35523 988 aa12.68□□□□□ -0.38
PRAME-204ENST00000403441 VASPP50552 380 aaPredicted RBP12.68□□□□□ -0.38
PRAME-204ENST00000403441 METAP1P53582 386 aa12.68□□□□□ -0.38
PRAME-204ENST00000403441 PDCLQ13371 301 aa12.68□□□□□ -0.38
PRAME-204ENST00000403441 AGBL4Q5VU57 503 aa12.68□□□□□ -0.38
PRAME-204ENST00000403441 CXorf57Q6NSI4 855 aaKnown RBP12.68□□□□□ -0.38
PRAME-204ENST00000403441 KANSL1Q7Z3B3 1105 aa12.68□□□□□ -0.38
PRAME-204ENST00000403441 TMEM110Q86TL2 294 aa12.68□□□□□ -0.38
PRAME-204ENST00000403441 CREBRFQ8IUR6 639 aa12.68□□□□□ -0.38
PRAME-204ENST00000403441 SNIP1Q8TAD8 396 aaKnown RBP12.68□□□□□ -0.38
PRAME-204ENST00000403441 FAM131CQ96AQ9 280 aa12.68□□□□□ -0.38
PRAME-204ENST00000403441 FCRL3Q96P31 734 aaPredicted RBP12.68□□□□□ -0.38
PRAME-204ENST00000403441 PRMT1Q99873 361 aaKnown RBP12.68□□□□□ -0.38
PRAME-204ENST00000403441 GANQ9H2C0 597 aa12.68□□□□□ -0.38
PRAME-204ENST00000403441 PREBQ9HCU5 417 aa12.68□□□□□ -0.38
PRAME-204ENST00000403441 ACP6Q9NPH0 428 aa12.68□□□□□ -0.38
PRAME-204ENST00000403441 TAB2Q9NYJ8 693 aa12.68□□□□□ -0.38
PRAME-204ENST00000403441 COX16Q9P0S2 106 aa12.68□□□□□ -0.38
PRAME-204ENST00000403441 ARHGAP20Q9P2F6 1191 aa12.68□□□□□ -0.38
PRAME-204ENST00000403441 VPS28Q9UK41 221 aa12.68□□□□□ -0.38
PRAME-204ENST00000403441 CLCA2Q9UQC9 943 aa12.68□□□□□ -0.38
PRAME-204ENST00000403441 SIK3Q9Y2K2 1263 aa12.68□□□□□ -0.38
PRAME-204ENST00000403441 DAAM1Q9Y4D1 1078 aa12.68□□□□□ -0.38
PRAME-204ENST00000403441 FARP1Q9Y4F1 1045 aaPredicted RBP12.68□□□□□ -0.38
PRAME-204ENST00000403441 KALRNO60229 2985 aa12.68□□□□□ -0.38
PRAME-204ENST00000403441 BPTFQ12830 3046 aa12.67□□□□□ -0.38
PRAME-204ENST00000403441 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.67□□□□□ -0.38
PRAME-204ENST00000403441 FOXN3O00409 490 aaPredicted RBP12.67□□□□□ -0.38
PRAME-204ENST00000403441 ATXN7O15265 892 aaPredicted RBP12.67□□□□□ -0.38
PRAME-204ENST00000403441 ATP9BO43861 1147 aa12.67□□□□□ -0.38
PRAME-204ENST00000403441 BRINP1O60477 761 aa12.67□□□□□ -0.38
PRAME-204ENST00000403441 HSF2BPO75031 334 aa12.67□□□□□ -0.38
PRAME-204ENST00000403441 SDC3O75056 442 aa12.67□□□□□ -0.38
PRAME-204ENST00000403441 UCHL3P15374 230 aa12.67□□□□□ -0.38
PRAME-204ENST00000403441 PTMSP20962 102 aa12.67□□□□□ -0.38
PRAME-204ENST00000403441 ACP1P24666 158 aa12.67□□□□□ -0.38
PRAME-204ENST00000403441 ACTN2P35609 894 aa12.67□□□□□ -0.38
PRAME-204ENST00000403441 COPB1P53618 953 aaKnown RBP12.67□□□□□ -0.38
PRAME-204ENST00000403441 DAB2P98082 770 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms