RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 ADCY10Q96PN6 1610 aa12.49□□□□□ -0.41
CACNA1C-219ENST00000399649 LIN7AO14910 233 aaPredicted RBP12.49□□□□□ -0.41
CACNA1C-219ENST00000399649 CAPN15O75808 1086 aa12.49□□□□□ -0.41
CACNA1C-219ENST00000399649 EPORP19235 508 aa12.49□□□□□ -0.41
CACNA1C-219ENST00000399649 RRM1P23921 792 aa12.49□□□□□ -0.41
CACNA1C-219ENST00000399649 Q4G0T1 1027 aa12.49□□□□□ -0.41
CACNA1C-219ENST00000399649 ZC3H7AQ8IWR0 971 aaKnown RBP12.49□□□□□ -0.41
CACNA1C-219ENST00000399649 COL26A1Q96A83 441 aa12.49□□□□□ -0.41
CACNA1C-219ENST00000399649 IGFLR1Q9H665 355 aa12.49□□□□□ -0.41
CACNA1C-219ENST00000399649 BTBD7Q9P203 1132 aa12.49□□□□□ -0.41
CACNA1C-219ENST00000399649 RPS6KA6Q9UK32 745 aa12.49□□□□□ -0.41
CACNA1C-219ENST00000399649 SCAF8Q9UPN6 1271 aaKnown RBP12.49□□□□□ -0.41
CACNA1C-219ENST00000399649 SH3BGRLO75368 114 aa12.49□□□□□ -0.41
CACNA1C-219ENST00000399649 FAM228BP0C875 321 aa12.49□□□□□ -0.41
CACNA1C-219ENST00000399649 PRKAG1P54619 331 aa12.49□□□□□ -0.41
CACNA1C-219ENST00000399649 ERVK-24P63145 666 aa12.49□□□□□ -0.41
CACNA1C-219ENST00000399649 LINC00116Q8NCU8 138 aa12.49□□□□□ -0.41
CACNA1C-219ENST00000399649 CDHR5Q9HBB8 845 aa12.49□□□□□ -0.41
CACNA1C-219ENST00000399649 GPN3Q9UHW5 284 aaPredicted RBP12.49□□□□□ -0.41
CACNA1C-219ENST00000399649 PSME2Q9UL46 239 aa12.49□□□□□ -0.41
CACNA1C-219ENST00000399649 TET3O43151 1660 aa12.49□□□□□ -0.41
CACNA1C-219ENST00000399649 A0A087WXM4 84 aa12.49□□□□□ -0.41
CACNA1C-219ENST00000399649 CXCR2P25025 360 aa12.49□□□□□ -0.41
CACNA1C-219ENST00000399649 LRPAP1P30533 357 aa12.49□□□□□ -0.41
CACNA1C-219ENST00000399649 BHLHE22Q8NFJ8 381 aaPredicted RBP12.49□□□□□ -0.41
CACNA1C-219ENST00000399649 NEK7Q8TDX7 302 aa12.49□□□□□ -0.41
CACNA1C-219ENST00000399649 MYDGFQ969H8 173 aa12.49□□□□□ -0.41
CACNA1C-219ENST00000399649 MTG1Q9BT17 334 aaPredicted RBP12.49□□□□□ -0.41
CACNA1C-219ENST00000399649 AGO4Q9HCK5 861 aaKnown RBP12.49□□□□□ -0.41
CACNA1C-219ENST00000399649 CROCC2H7BZ55 1655 aa12.49□□□□□ -0.41
CACNA1C-219ENST00000399649 A0A096LPK6 155 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 SNUPNO95149 360 aaKnown RBP12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 CDK7P50613 346 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 QPRTQ15274 297 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 ZKSCAN4Q969J2 545 aaPredicted RBP12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 SUCOQ9UBS9 1254 aaKnown RBP12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 TNPO3Q9Y5L0 923 aaKnown RBP12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 A8MX80 341 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 CXCL8P10145 99 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 FGFR3P22607 806 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 C1QBPQ07021 282 aaKnown RBP12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 ACSM2AQ08AH3 577 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 TAF5Q15542 800 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 ACSM2BQ68CK6 577 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 PGBD2Q6P3X8 592 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 FBXL19Q6PCT2 694 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 CAMK1DQ8IU85 385 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 RGL4Q8IZJ4 473 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 ERLEC1Q96DZ1 483 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 ZNF354BQ96LW1 612 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 SENP6Q9GZR1 1112 aaPredicted RBP12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 EPB41L1Q9H4G0 881 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 PRODHO43272 600 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 RECQL5O94762 991 aaPredicted RBP12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 ZNF37AP17032 561 aaPredicted RBP12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 ELK3P41970 407 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 MSLNQ13421 630 aaPredicted RBP12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 GIT2Q14161 759 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 FAM171A1Q5VUB5 890 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 AGBL3Q8NEM8 1001 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 TCP10LQ8TDR4 215 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 RERGQ96A58 199 aaPredicted RBP12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 SLC25A23Q9BV35 468 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 C1QTNF1Q9BXJ1 281 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 TSPAN16Q9UKR8 245 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 USP42Q9H9J4 1324 aaKnown RBP12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 DET1Q7L5Y6 550 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 SAMD7Q7Z3H4 446 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 SNX32Q86XE0 403 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 ARHGEF19Q8IW93 802 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 FDXACB1Q9BRP7 624 aaPredicted RBP12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 SLC39A8Q9C0K1 460 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 SHOC2Q9UQ13 582 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 FAM25EA8MYX2 175 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 FCHO1O14526 889 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 FOSL2P15408 326 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 NPR3P17342 541 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 THOP1P52888 689 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 ADARP55265 1226 aaKnown RBP12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 DCTN2Q13561 401 aaKnown RBP12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 WDR93Q6P2C0 686 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 CLEC17AQ6ZS10 378 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 CXXC5Q7LFL8 322 aaKnown RBP12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 KLHL23Q8NBE8 558 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 FBXO30Q8TB52 745 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 NELL1Q92832 810 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 REXO5Q96IC2 774 aaKnown RBP12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 NRDE2Q9H7Z3 1164 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 IKZF3Q9UKT9 509 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 VPS4AQ9UN37 437 aa12.48□□□□□ -0.41
CACNA1C-219ENST00000399649 STX16-NPEPL1H3BU86 382 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 STX16O14662 325 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 MOXD1Q6UVY6 613 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 IQCF2Q8IXL9 164 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 CDRT15Q96T59 188 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 OSMRQ99650 979 aa12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 GTPBP1O00178 669 aaKnown RBP12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 KPNA3O00505 521 aaPredicted RBP12.47□□□□□ -0.41
CACNA1C-219ENST00000399649 ITGA2P17301 1181 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms