RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 ATG4CQ96DT6 458 aa11.8□□□□□ -0.52
HLCS-202ENST00000399120 APBA2Q99767 749 aa11.8□□□□□ -0.52
HLCS-202ENST00000399120 CEP41Q9BYV8 373 aa11.8□□□□□ -0.52
HLCS-202ENST00000399120 NUDT5Q9UKK9 219 aa11.8□□□□□ -0.52
HLCS-202ENST00000399120 MAGEB3O15480 346 aa11.8□□□□□ -0.52
HLCS-202ENST00000399120 H2AFXP16104 143 aaPredicted RBP11.8□□□□□ -0.52
HLCS-202ENST00000399120 BMP7P18075 431 aa11.8□□□□□ -0.52
HLCS-202ENST00000399120 RRM1P23921 792 aa11.8□□□□□ -0.52
HLCS-202ENST00000399120 KLRC2P26717 231 aa11.8□□□□□ -0.52
HLCS-202ENST00000399120 TTKP33981 857 aa11.8□□□□□ -0.52
HLCS-202ENST00000399120 MSLNQ13421 630 aaPredicted RBP11.8□□□□□ -0.52
HLCS-202ENST00000399120 TMEM63BQ5T3F8 832 aa11.8□□□□□ -0.52
HLCS-202ENST00000399120 BROXQ5VW32 411 aa11.8□□□□□ -0.52
HLCS-202ENST00000399120 CCSAPQ6IQ19 270 aaPredicted RBP11.8□□□□□ -0.52
HLCS-202ENST00000399120 STOX1Q6ZVD7 989 aa11.8□□□□□ -0.52
HLCS-202ENST00000399120 MARK2Q7KZI7 788 aaKnown RBP11.8□□□□□ -0.52
HLCS-202ENST00000399120 ADGRG2Q8IZP9 1017 aa11.8□□□□□ -0.52
HLCS-202ENST00000399120 DEPDC4Q8N2C3 294 aa11.8□□□□□ -0.52
HLCS-202ENST00000399120 MAGEE2Q8TD90 523 aaPredicted RBP11.8□□□□□ -0.52
HLCS-202ENST00000399120 ZNF483Q8TF39 744 aaPredicted RBP11.8□□□□□ -0.52
HLCS-202ENST00000399120 UBE2E3Q969T4 207 aa11.8□□□□□ -0.52
HLCS-202ENST00000399120 MARK1Q9P0L2 795 aa11.8□□□□□ -0.52
HLCS-202ENST00000399120 SUCOQ9UBS9 1254 aaKnown RBP11.8□□□□□ -0.52
HLCS-202ENST00000399120 NPHP4O75161 1426 aaPredicted RBP11.8□□□□□ -0.52
HLCS-202ENST00000399120 PGK1P00558 417 aa11.8□□□□□ -0.52
HLCS-202ENST00000399120 GZMAP12544 262 aa11.8□□□□□ -0.52
HLCS-202ENST00000399120 DGKAP23743 735 aa11.8□□□□□ -0.52
HLCS-202ENST00000399120 ELK3P41970 407 aa11.8□□□□□ -0.52
HLCS-202ENST00000399120 MARSP56192 900 aaKnown RBP11.8□□□□□ -0.52
HLCS-202ENST00000399120 SLC4A9Q96Q91 983 aa11.8□□□□□ -0.52
HLCS-202ENST00000399120 CISHQ9NSE2 258 aa11.8□□□□□ -0.52
HLCS-202ENST00000399120 CELF2O95319 508 aaKnown RBP11.79□□□□□ -0.52
HLCS-202ENST00000399120 DBTP11182 482 aaKnown RBP11.79□□□□□ -0.52
HLCS-202ENST00000399120 RPL9P32969 192 aaKnown RBP11.79□□□□□ -0.52
HLCS-202ENST00000399120 CDK7P50613 346 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 PTPN11Q06124 597 aaPredicted RBP11.79□□□□□ -0.52
HLCS-202ENST00000399120 NR1D2Q14995 579 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 WDR93Q6P2C0 686 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 STK40Q8N2I9 435 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 ARRDC4Q8NCT1 418 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 FBXO25Q8TCJ0 367 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 EDEM1Q92611 657 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 SHOC2Q9UQ13 582 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 TNPO3Q9Y5L0 923 aaKnown RBP11.79□□□□□ -0.52
HLCS-202ENST00000399120 BICRAQ9NZM4 1560 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 MCIDASD6RGH6 385 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 GTPBP1O00178 669 aaKnown RBP11.79□□□□□ -0.52
HLCS-202ENST00000399120 DCXO43602 365 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 ITGA2P17301 1181 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 NRF1Q16656 503 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 INSCQ1MX18 579 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 HHIPL2Q6UWX4 724 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 ANKRD13AQ8IZ07 590 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 TSPAN14Q8NG11 270 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 ISCA1Q9BUE6 129 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.79□□□□□ -0.52
HLCS-202ENST00000399120 GSAPA4D1B5 854 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 PRMT3O60678 531 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 VAPBO95292 243 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 PRLRP16471 622 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 S100A1P23297 94 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 CXCR2P25025 360 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 UGT1A5P35504 534 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 THOP1P52888 689 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 HSF2Q03933 536 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 NAB1Q13506 487 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 ARMC12Q5T9G4 340 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 DENND5AQ6IQ26 1287 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 RASSF6Q6ZTQ3 369 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 USP45Q70EL2 814 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 WDR60Q8WVS4 1066 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 SELENOMQ8WWX9 145 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 ELMO1Q92556 727 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 KLQ9UEF7 1012 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 ATXN2Q99700 1313 aaKnown RBP11.79□□□□□ -0.52
HLCS-202ENST00000399120 KPNA3O00505 521 aaPredicted RBP11.79□□□□□ -0.52
HLCS-202ENST00000399120 ADSSP30520 456 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 UGT2B15P54855 530 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 FOXO4P98177 505 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 NFIXQ14938 502 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 PLEKHG4BQ96PX9 1271 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 GPRC5CQ9NQ84 441 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 KANSL3Q9P2N6 904 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 CORO2BQ9UQ03 480 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 SYNMO15061 1565 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 OR5F1O95221 314 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 SUPT20HL2P0C7V6 817 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 ERCC2P18074 760 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 FAUP35544 74 aaKnown RBP11.79□□□□□ -0.52
HLCS-202ENST00000399120 NR2C2P49116 596 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 BNC1Q01954 994 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 RGS1Q08116 209 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 PRAMEF18Q5VWM3 479 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 BHLHB9Q6PI77 547 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 SLC47A2Q86VL8 602 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 EFCAB3Q8N7B9 438 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 HTR3CQ8WXA8 447 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 CRAMP1Q96RY5 1269 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 ATXN3LQ9H3M9 355 aa11.79□□□□□ -0.52
HLCS-202ENST00000399120 ITGA11Q9UKX5 1188 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms