RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 OXCT2Q9BYC2 517 aaPredicted RBP5.02□□□□□ -1.61
SMAD4-202ENST00000398417 ILKAPQ9H0C8 392 aaPredicted RBP5.02□□□□□ -1.61
SMAD4-202ENST00000398417 XPR1Q9UBH6 696 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 SLC2A6Q9UGQ3 507 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 VANGL2Q9ULK5 521 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 NOL3O60936 208 aaKnown RBP5.02□□□□□ -1.61
SMAD4-202ENST00000398417 RPL14P50914 215 aaKnown RBP5.02□□□□□ -1.61
SMAD4-202ENST00000398417 WASHC5Q12768 1159 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 ZNF460Q14592 562 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 POU6F1Q14863 301 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 RPS6KA2Q15349 733 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 PLA2G4EQ3MJ16 856 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 RAB44Q7Z6P3 723 aaPredicted RBP5.02□□□□□ -1.61
SMAD4-202ENST00000398417 ZNF410Q86VK4 478 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 PLD6Q8N2A8 252 aaKnown RBP5.02□□□□□ -1.61
SMAD4-202ENST00000398417 IFT43Q96FT9 208 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 GAD1Q99259 594 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 SPON2Q9BUD6 331 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 Q9H521 79 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 DNAJC28Q9NX36 388 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 MIOSQ9NXC5 875 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.02□□□□□ -1.61
SMAD4-202ENST00000398417 CORO1CQ9ULV4 474 aaPredicted RBP5.02□□□□□ -1.61
SMAD4-202ENST00000398417 PRG3Q9Y2Y8 225 aaPredicted RBP5.02□□□□□ -1.61
SMAD4-202ENST00000398417 PSMD3O43242 534 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 AMHP03971 560 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 C2P06681 752 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 IL4RP24394 825 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 KRT20P35900 424 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 ALDH1A3P47895 512 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 OCRLQ01968 901 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 YWHAHQ04917 246 aaPredicted RBP5.02□□□□□ -1.61
SMAD4-202ENST00000398417 KRT72Q14CN4 511 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 RPS27LQ71UM5 84 aaKnown RBP5.02□□□□□ -1.61
SMAD4-202ENST00000398417 ZNF781Q8N8C0 355 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 NXNL1Q96CM4 212 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 VPS39Q96JC1 886 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 ZFP42Q96MM3 310 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 HNRNPABQ99729 332 aaKnown RBP5.02□□□□□ -1.61
SMAD4-202ENST00000398417 SP110Q9HB58 689 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 A0A0G2JLL6 359 aaPredicted RBP5.02□□□□□ -1.61
SMAD4-202ENST00000398417 BIRC5O15392 142 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 FAM189A1O60320 539 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 BEST1O76090 585 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 LYNP07948 512 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 SERPINA6P08185 405 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 EPHA3P29320 983 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 PRAMEP78395 509 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 PRRT2Q7Z6L0 340 aaPredicted RBP5.02□□□□□ -1.61
SMAD4-202ENST00000398417 TMEM110Q86TL2 294 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 TTC30BQ8N4P2 665 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 C2orf69Q8N8R5 385 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 EMID1Q96A84 441 aaPredicted RBP5.02□□□□□ -1.61
SMAD4-202ENST00000398417 OR52B2Q96RD2 323 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 COG4Q9H9E3 785 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 RBM22Q9NW64 420 aaKnown RBP eCLIP5.02□□□□□ -1.611e-11■■■□□ 16.5
SMAD4-202ENST00000398417 SLC7A8Q9UHI5 535 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 BLOC1S6Q9UL45 172 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 CHD2O14647 1828 aaKnown RBP5.02□□□□□ -1.61
SMAD4-202ENST00000398417 TM7SF2O76062 418 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 LTFP02788 710 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 ITGAXP20702 1163 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 EPHX2P34913 555 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 KPNA2P52292 529 aaKnown RBP5.02□□□□□ -1.61
SMAD4-202ENST00000398417 TAF1CQ15572 869 aaPredicted RBP5.02□□□□□ -1.61
SMAD4-202ENST00000398417 FUT11Q495W5 492 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 GPR142Q7Z601 462 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 PPP2R3CQ969Q6 453 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 NMD3Q96D46 503 aaKnown RBP5.02□□□□□ -1.61
SMAD4-202ENST00000398417 PANX3Q96QZ0 392 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 EBF3Q9H4W6 596 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 PDP2Q9P2J9 529 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 MORF4L1Q9UBU8 362 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 SFMBT1Q9UHJ3 866 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 PAIP2BQ9ULR5 123 aaKnown RBP5.02□□□□□ -1.61
SMAD4-202ENST00000398417 TEX264Q9Y6I9 313 aa5.02□□□□□ -1.61
SMAD4-202ENST00000398417 TTC24A2A3L6 582 aaPredicted RBP5.01□□□□□ -1.61
SMAD4-202ENST00000398417 TBX10O75333 385 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 SUPT7LO94864 414 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 CELF2O95319 508 aaKnown RBP5.01□□□□□ -1.61
SMAD4-202ENST00000398417 DHRS4L1P0CG22 281 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 STMN1P16949 149 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 GPRIN1Q7Z2K8 1008 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 DHDDSQ86SQ9 333 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 PIDD1Q9HB75 910 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 USP34Q70CQ2 3546 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 MRASO14807 208 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 C4AP0C0L4 1744 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 C4BP0C0L5 1744 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 ETS2P15036 469 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 MATKP42679 507 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 PAPOLAP51003 745 aaKnown RBP5.01□□□□□ -1.61
SMAD4-202ENST00000398417 MAXP61244 160 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 CDH17Q12864 832 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 NAB1Q13506 487 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 CYLC2Q14093 348 aaPredicted RBP5.01□□□□□ -1.61
SMAD4-202ENST00000398417 TSC22D1Q15714 1073 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 PPM1LQ5SGD2 360 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 AAGABQ6PD74 315 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 CYP2R1Q6VVX0 501 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms