RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 PPTC7Q8NI37 304 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 SERPINB3P29508 390 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 SSTR1P30872 391 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 HOXA10P31260 410 aaPredicted RBP11.53□□□□□ -0.56
TTC28-201ENST00000397906 PEX5P50542 639 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 ZNF621Q6ZSS3 439 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 RASAL3Q86YV0 1011 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 TTPALQ9BTX7 342 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 SPATA31D1Q6ZQQ2 1576 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 CAPN1P07384 714 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 C16orf46Q6P387 395 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 NKX2-3Q8TAU0 364 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 MRPL45Q9BRJ2 306 aaKnown RBP11.53□□□□□ -0.56
TTC28-201ENST00000397906 KLHL1Q9NR64 748 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 SIK3Q9Y2K2 1263 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 FFAR3O14843 346 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 GPR42O15529 346 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 THRAP10827 490 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 PCYT1AP49585 367 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 BNC2Q6ZN30 1099 aaPredicted RBP11.53□□□□□ -0.56
TTC28-201ENST00000397906 SUGP1Q8IWZ8 645 aaKnown RBP11.53□□□□□ -0.56
TTC28-201ENST00000397906 CNPY4Q8N129 248 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 MAGEB18Q96M61 343 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 PCDH9Q9HC56 1237 aa11.53□□□□□ -0.56
TTC28-201ENST00000397906 FBXO6Q9NRD1 293 aaPredicted RBP11.53□□□□□ -0.56
TTC28-201ENST00000397906 FAM220BPB1ANY3 271 aa11.52□□□□□ -0.56
TTC28-201ENST00000397906 H3BN98 237 aa11.52□□□□□ -0.56
TTC28-201ENST00000397906 MSI1O43347 362 aaKnown RBP11.52□□□□□ -0.56
TTC28-201ENST00000397906 ATP9AO75110 1047 aa11.52□□□□□ -0.56
TTC28-201ENST00000397906 AADACL2Q6P093 401 aa11.52□□□□□ -0.56
TTC28-201ENST00000397906 FAM228AQ86W67 206 aa11.52□□□□□ -0.56
TTC28-201ENST00000397906 FBXO25Q8TCJ0 367 aa11.52□□□□□ -0.56
TTC28-201ENST00000397906 FGF10O15520 208 aaPredicted RBP11.52□□□□□ -0.56
TTC28-201ENST00000397906 TLR5O60602 858 aa11.52□□□□□ -0.56
TTC28-201ENST00000397906 ETS1P14921 441 aa11.52□□□□□ -0.56
TTC28-201ENST00000397906 SYN1P17600 705 aa11.52□□□□□ -0.56
TTC28-201ENST00000397906 C18orf25Q96B23 403 aaPredicted RBP11.52□□□□□ -0.56
TTC28-201ENST00000397906 GNPTGQ9UJJ9 305 aa11.52□□□□□ -0.56
TTC28-201ENST00000397906 HPSEQ9Y251 543 aa11.52□□□□□ -0.56
TTC28-201ENST00000397906 PTPRJQ12913 1337 aa11.52□□□□□ -0.56
TTC28-201ENST00000397906 SNTNA6NMZ2 147 aa11.52□□□□□ -0.56
TTC28-201ENST00000397906 ISM1B1AKI9 464 aa11.52□□□□□ -0.56
TTC28-201ENST00000397906 GRK2P25098 689 aa11.52□□□□□ -0.56
TTC28-201ENST00000397906 FKBP1BP68106 108 aa11.52□□□□□ -0.56
TTC28-201ENST00000397906 PFKFB4Q16877 469 aa11.52□□□□□ -0.56
TTC28-201ENST00000397906 SLC41A1Q8IVJ1 513 aa11.52□□□□□ -0.56
TTC28-201ENST00000397906 C2orf73Q8N5S3 287 aaPredicted RBP11.52□□□□□ -0.56
TTC28-201ENST00000397906 OR56A4Q8NGH8 313 aa11.52□□□□□ -0.56
TTC28-201ENST00000397906 KLQ9UEF7 1012 aa11.52□□□□□ -0.56
TTC28-201ENST00000397906 BAZ2BQ9UIF8 2168 aaKnown RBP11.52□□□□□ -0.57
TTC28-201ENST00000397906 H0Y858 1186 aa11.52□□□□□ -0.57
TTC28-201ENST00000397906 PHGDHO43175 533 aaKnown RBP11.52□□□□□ -0.57
TTC28-201ENST00000397906 TAF13Q15543 124 aa11.52□□□□□ -0.57
TTC28-201ENST00000397906 DCLRE1AQ6PJP8 1040 aa11.52□□□□□ -0.57
TTC28-201ENST00000397906 C16orf62Q7Z3J2 963 aa11.52□□□□□ -0.57
TTC28-201ENST00000397906 KIAA2013Q8IYS2 634 aa11.52□□□□□ -0.57
TTC28-201ENST00000397906 CCNB1P14635 433 aa11.52□□□□□ -0.57
TTC28-201ENST00000397906 RCN1Q15293 331 aa11.52□□□□□ -0.57
TTC28-201ENST00000397906 AP5B1Q2VPB7 878 aa11.52□□□□□ -0.57
TTC28-201ENST00000397906 KLRG1Q96E93 195 aa11.52□□□□□ -0.57
TTC28-201ENST00000397906 TBCBQ99426 244 aa11.52□□□□□ -0.57
TTC28-201ENST00000397906 TMEM134Q9H6X4 195 aa11.52□□□□□ -0.57
TTC28-201ENST00000397906 TUBGCP4Q9UGJ1 667 aa11.52□□□□□ -0.57
TTC28-201ENST00000397906 PSMD10O75832 226 aa11.52□□□□□ -0.57
TTC28-201ENST00000397906 ACRP10323 421 aa11.52□□□□□ -0.57
TTC28-201ENST00000397906 DGKAP23743 735 aa11.52□□□□□ -0.57
TTC28-201ENST00000397906 NPY2RP49146 381 aa11.52□□□□□ -0.57
TTC28-201ENST00000397906 RASA2Q15283 850 aa11.52□□□□□ -0.57
TTC28-201ENST00000397906 TBCDQ9BTW9 1192 aa11.52□□□□□ -0.57
TTC28-201ENST00000397906 ELFN1P0C7U0 828 aa11.52□□□□□ -0.57
TTC28-201ENST00000397906 COX7A2P14406 83 aa11.52□□□□□ -0.57
TTC28-201ENST00000397906 PPP3CAQ08209 521 aa11.52□□□□□ -0.57
TTC28-201ENST00000397906 KAT5Q92993 513 aa11.52□□□□□ -0.57
TTC28-201ENST00000397906 MARK4Q96L34 752 aa11.52□□□□□ -0.57
TTC28-201ENST00000397906 NDNQ99608 321 aa11.52□□□□□ -0.57
TTC28-201ENST00000397906 FAM126AQ9BYI3 521 aaPredicted RBP11.52□□□□□ -0.57
TTC28-201ENST00000397906 ALG9Q9H6U8 611 aa11.52□□□□□ -0.57
TTC28-201ENST00000397906 NAALADL1Q9UQQ1 740 aa11.52□□□□□ -0.57
TTC28-201ENST00000397906 SEPT4O43236 478 aa11.52□□□□□ -0.57
TTC28-201ENST00000397906 HS6ST1O60243 411 aa11.52□□□□□ -0.57
TTC28-201ENST00000397906 RPA3P35244 121 aaPredicted RBP11.52□□□□□ -0.57
TTC28-201ENST00000397906 FLT3P36888 993 aa11.52□□□□□ -0.57
TTC28-201ENST00000397906 MAD2L1Q13257 205 aaPredicted RBP11.52□□□□□ -0.57
TTC28-201ENST00000397906 C1orf186Q6ZWK4 172 aa11.52□□□□□ -0.57
TTC28-201ENST00000397906 ARHGEF28Q8N1W1 1705 aaKnown RBP11.52□□□□□ -0.57
TTC28-201ENST00000397906 OR6A2O95222 327 aa11.52□□□□□ -0.57
TTC28-201ENST00000397906 CRATP43155 626 aa11.52□□□□□ -0.57
TTC28-201ENST00000397906 IL2P60568 153 aa11.52□□□□□ -0.57
TTC28-201ENST00000397906 ZNF557Q8N988 423 aaPredicted RBP11.52□□□□□ -0.57
TTC28-201ENST00000397906 OR52K1Q8NGK4 314 aa11.52□□□□□ -0.57
TTC28-201ENST00000397906 TREHO43280 583 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 GLMNQ92990 594 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 ZNF711Q9Y462 761 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 PRKAB1Q9Y478 270 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 LACRTQ9GZZ8 138 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 RNPEPQ9H4A4 650 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 CLEC17AQ6ZS10 378 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 DSELQ8IZU8 1212 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 CPA6Q8N4T0 437 aa11.51□□□□□ -0.57
TTC28-201ENST00000397906 HJURPQ8NCD3 748 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms