RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 CAPN15O75808 1086 aa18.72■□□□□ 0.59
CHRFAM7A-202ENST00000397827 PGK1P00558 417 aa18.72■□□□□ 0.59
CHRFAM7A-202ENST00000397827 ITGA9Q13797 1035 aa18.72■□□□□ 0.59
CHRFAM7A-202ENST00000397827 UPP1Q16831 310 aa18.72■□□□□ 0.59
CHRFAM7A-202ENST00000397827 HDAC11Q96DB2 347 aa18.72■□□□□ 0.59
CHRFAM7A-202ENST00000397827 FAM161BQ96MY7 647 aa18.72■□□□□ 0.59
CHRFAM7A-202ENST00000397827 RBBP8Q99708 897 aa18.72■□□□□ 0.59
CHRFAM7A-202ENST00000397827 SIK2Q9H0K1 926 aa18.72■□□□□ 0.59
CHRFAM7A-202ENST00000397827 ARHGAP42A6NI28 874 aa18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 NCAM2O15394 837 aa18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 B3GAT3O94766 335 aa18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 SERPINA6P08185 405 aa18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 HCAR3P49019 387 aa18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 HUNKP57058 714 aa18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 IRF9Q00978 393 aa18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 PPP2R5DQ14738 602 aa18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 LBRQ14739 615 aaKnown RBP18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 CST9Q5W186 159 aa18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 MAVSQ7Z434 540 aa18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 ACVR1CQ8NER5 493 aa18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 DTX3LQ8TDB6 740 aa18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 TMEM209Q96SK2 561 aa18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 SORT1Q99523 831 aa18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 MMADHCQ9H3L0 296 aaPredicted RBP18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 TMLHEQ9NVH6 421 aa18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 TAGLN3Q9UI15 199 aa18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 Q9Y3F1 56 aa18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 PTCH2Q9Y6C5 1203 aa18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 SERPINE1P05121 402 aa18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 RGS2P41220 211 aa18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 CXCR3P49682 368 aa18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 PGGT1BP53609 377 aa18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 GALNT2Q10471 571 aa18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 VWA5B1Q5TIE3 1220 aa18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 RWDD4Q6NW29 188 aaKnown RBP18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 ARHGAP36Q6ZRI8 547 aa18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 OTOP3Q7RTS5 596 aa18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 RSPH3Q86UC2 560 aa18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 TMPRSS6Q8IU80 811 aa18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 TRPV1Q8NER1 839 aa18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 SCAMP5Q8TAC9 235 aa18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 DNAAF2Q9NVR5 837 aaKnown RBP18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 LRRC42Q9Y546 428 aa18.71■□□□□ 0.59
CHRFAM7A-202ENST00000397827 USP1O94782 785 aa18.7■□□□□ 0.58
CHRFAM7A-202ENST00000397827 MX2P20592 715 aa18.7■□□□□ 0.58
CHRFAM7A-202ENST00000397827 TUBB3Q13509 450 aa18.7■□□□□ 0.58
CHRFAM7A-202ENST00000397827 SH3TC2Q8TF17 1288 aa18.7■□□□□ 0.58
CHRFAM7A-202ENST00000397827 ANKRD27Q96NW4 1050 aa18.7■□□□□ 0.58
CHRFAM7A-202ENST00000397827 OXCT2Q9BYC2 517 aaPredicted RBP18.7■□□□□ 0.58
CHRFAM7A-202ENST00000397827 C20orf96Q9NUD7 363 aaPredicted RBP18.7■□□□□ 0.58
CHRFAM7A-202ENST00000397827 DLGAP2Q9P1A6 1054 aa18.7■□□□□ 0.58
CHRFAM7A-202ENST00000397827 MEI4A8MW99 385 aa18.7■□□□□ 0.58
CHRFAM7A-202ENST00000397827 SPECC1L-ADORA2AF8WAN1 911 aa18.7■□□□□ 0.58
CHRFAM7A-202ENST00000397827 F9P00740 461 aa18.7■□□□□ 0.58
CHRFAM7A-202ENST00000397827 RALBP11234 206 aa18.7■□□□□ 0.58
CHRFAM7A-202ENST00000397827 SP100P23497 879 aaPredicted RBP18.7■□□□□ 0.58
CHRFAM7A-202ENST00000397827 PCSK1P29120 753 aa18.7■□□□□ 0.58
CHRFAM7A-202ENST00000397827 SPRP35270 261 aaPredicted RBP18.7■□□□□ 0.58
CHRFAM7A-202ENST00000397827 LIMK2P53671 638 aa18.7■□□□□ 0.58
CHRFAM7A-202ENST00000397827 CDK18Q07002 472 aa18.7■□□□□ 0.58
CHRFAM7A-202ENST00000397827 THOC5Q13769 683 aaKnown RBP18.7■□□□□ 0.58
CHRFAM7A-202ENST00000397827 CCDC6Q16204 474 aa18.7■□□□□ 0.58
CHRFAM7A-202ENST00000397827 APLFQ8IW19 511 aaPredicted RBP18.7■□□□□ 0.58
CHRFAM7A-202ENST00000397827 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.7■□□□□ 0.58
CHRFAM7A-202ENST00000397827 LMNAP02545 664 aaKnown RBP18.7■□□□□ 0.58
CHRFAM7A-202ENST00000397827 AKR1A1P14550 325 aa18.7■□□□□ 0.58
CHRFAM7A-202ENST00000397827 CPA3P15088 417 aa18.7■□□□□ 0.58
CHRFAM7A-202ENST00000397827 SDCCAG8Q86SQ7 713 aaPredicted RBP18.7■□□□□ 0.58
CHRFAM7A-202ENST00000397827 KCNMB4Q86W47 210 aa18.7■□□□□ 0.58
CHRFAM7A-202ENST00000397827 TEKT5Q96M29 485 aa18.7■□□□□ 0.58
CHRFAM7A-202ENST00000397827 APBA2Q99767 749 aa18.7■□□□□ 0.58
CHRFAM7A-202ENST00000397827 THTPAQ9BU02 230 aa18.7■□□□□ 0.58
CHRFAM7A-202ENST00000397827 SENP6Q9GZR1 1112 aaPredicted RBP18.7■□□□□ 0.58
CHRFAM7A-202ENST00000397827 CSNK1G1Q9HCP0 422 aa18.7■□□□□ 0.58
CHRFAM7A-202ENST00000397827 IARS2Q9NSE4 1012 aaKnown RBP18.7■□□□□ 0.58
CHRFAM7A-202ENST00000397827 RAD54BQ9Y620 910 aa18.7■□□□□ 0.58
CHRFAM7A-202ENST00000397827 TTC3P53804 2025 aa18.69■□□□□ 0.58
CHRFAM7A-202ENST00000397827 A0A096LPK6 155 aa18.69■□□□□ 0.58
CHRFAM7A-202ENST00000397827 TNPO2O14787 897 aaKnown RBP18.69■□□□□ 0.58
CHRFAM7A-202ENST00000397827 NMBRP28336 390 aa18.69■□□□□ 0.58
CHRFAM7A-202ENST00000397827 SERPINB6P35237 376 aa18.69■□□□□ 0.58
CHRFAM7A-202ENST00000397827 DBN1Q16643 649 aa18.69■□□□□ 0.58
CHRFAM7A-202ENST00000397827 INSCQ1MX18 579 aa18.69■□□□□ 0.58
CHRFAM7A-202ENST00000397827 LRRTM3Q86VH5 581 aa18.69■□□□□ 0.58
CHRFAM7A-202ENST00000397827 CNTD1Q8N815 330 aa18.69■□□□□ 0.58
CHRFAM7A-202ENST00000397827 SPATA22Q8NHS9 363 aa18.69■□□□□ 0.58
CHRFAM7A-202ENST00000397827 ZSCAN18Q8TBC5 510 aaPredicted RBP18.69■□□□□ 0.58
CHRFAM7A-202ENST00000397827 DQX1Q8TE96 717 aaKnown RBP18.69■□□□□ 0.58
CHRFAM7A-202ENST00000397827 PPP4R1Q8TF05 950 aa18.69■□□□□ 0.58
CHRFAM7A-202ENST00000397827 TRPM7Q96QT4 1865 aa18.69■□□□□ 0.58
CHRFAM7A-202ENST00000397827 F8W810 466 aa18.69■□□□□ 0.58
CHRFAM7A-202ENST00000397827 DFFAO00273 331 aa18.69■□□□□ 0.58
CHRFAM7A-202ENST00000397827 MGEA5O60502 916 aa18.69■□□□□ 0.58
CHRFAM7A-202ENST00000397827 CD52P31358 61 aa18.69■□□□□ 0.58
CHRFAM7A-202ENST00000397827 KLC1Q07866 573 aa18.69■□□□□ 0.58
CHRFAM7A-202ENST00000397827 DYNC1I2Q13409 638 aaKnown RBP18.69■□□□□ 0.58
CHRFAM7A-202ENST00000397827 MOCOSQ96EN8 888 aa18.69■□□□□ 0.58
CHRFAM7A-202ENST00000397827 ACSS2Q9NR19 701 aa18.69■□□□□ 0.58
CHRFAM7A-202ENST00000397827 TRHDEQ9UKU6 1024 aa18.69■□□□□ 0.58
CHRFAM7A-202ENST00000397827 APOBEC2Q9Y235 224 aaKnown RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms