RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 TRPV4Q9HBA0 871 aa21.66■■□□□ 1.06
CPNE1-204ENST00000397443 ATP13A1Q9HD20 1204 aa21.66■■□□□ 1.06
CPNE1-204ENST00000397443 KLHL8Q9P2G9 620 aaPredicted RBP21.66■■□□□ 1.06
CPNE1-204ENST00000397443 ILVBLA1L0T0 632 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 CBX4O00257 560 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 TYRP14679 529 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 CCNCP24863 283 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 PTPN3P26045 913 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 PLTPP55058 493 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 BASP1P80723 227 aaKnown RBP21.65■■□□□ 1.06
CPNE1-204ENST00000397443 TNK2Q07912 1038 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 ANKRD20A2Q5SQ80 823 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 ANKRD20A1Q5TYW2 823 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 ANKRD20A3Q5VUR7 823 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 ARHGEF18Q6ZSZ5 1173 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 ZNF567Q8N184 647 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 OTUB2Q96DC9 234 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 RTP4Q96DX8 246 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 SNF8Q96H20 258 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 NECTIN4Q96NY8 510 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 TSGA13Q96PP4 275 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 VPS28Q9UK41 221 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 ACTL7AQ9Y615 435 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 A0A0A0MRY4 1105 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 CCNB1P14635 433 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 IVDP26440 423 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 ETFBP38117 255 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 DHCR24Q15392 516 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 EML3Q32P44 896 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 MPP7Q5T2T1 576 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 IZUMO3Q5VZ72 239 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 WDR93Q6P2C0 686 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 PID1Q7Z2X4 250 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 TTC8Q8TAM2 541 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 CCHCR1Q8TD31 782 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 SUSD6Q92537 303 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 SPATA13Q96N96 652 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 RPP25Q9BUL9 199 aaKnown RBP21.65■■□□□ 1.06
CPNE1-204ENST00000397443 NEUROG2Q9H2A3 272 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 RETREG1Q9H6L5 497 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 THG1LQ9NWX6 298 aaKnown RBP21.65■■□□□ 1.06
CPNE1-204ENST00000397443 GRHL1Q9NZI5 618 aa21.65■■□□□ 1.06
CPNE1-204ENST00000397443 DENND4AQ7Z401 1863 aa21.64■■□□□ 1.05
CPNE1-204ENST00000397443 C5orf60A6NFR6 353 aa21.64■■□□□ 1.05
CPNE1-204ENST00000397443 MATN3O15232 486 aa21.64■■□□□ 1.05
CPNE1-204ENST00000397443 NEBLO76041 1014 aa21.64■■□□□ 1.05
CPNE1-204ENST00000397443 CYP17A1P05093 508 aa21.64■■□□□ 1.05
CPNE1-204ENST00000397443 CD70P32970 193 aa21.64■■□□□ 1.05
CPNE1-204ENST00000397443 OXCT1P55809 520 aa21.64■■□□□ 1.05
CPNE1-204ENST00000397443 CALCOCO2Q13137 446 aa21.64■■□□□ 1.05
CPNE1-204ENST00000397443 HABP4Q5JVS0 413 aaKnown RBP21.64■■□□□ 1.05
CPNE1-204ENST00000397443 TIGD7Q6NT04 549 aaPredicted RBP21.64■■□□□ 1.05
CPNE1-204ENST00000397443 YAF2Q8IY57 180 aa21.64■■□□□ 1.05
CPNE1-204ENST00000397443 ZNF419Q96HQ0 510 aaPredicted RBP21.64■■□□□ 1.05
CPNE1-204ENST00000397443 RAB6BQ9NRW1 208 aa21.64■■□□□ 1.05
CPNE1-204ENST00000397443 FAM114A2Q9NRY5 505 aa21.64■■□□□ 1.05
CPNE1-204ENST00000397443 ABCB8Q9NUT2 735 aa21.64■■□□□ 1.05
CPNE1-204ENST00000397443 PAK5Q9P286 719 aa21.64■■□□□ 1.05
CPNE1-204ENST00000397443 SNAP91O60641 907 aa21.63■■□□□ 1.05
CPNE1-204ENST00000397443 GCATO75600 419 aa21.63■■□□□ 1.05
CPNE1-204ENST00000397443 SEC31AO94979 1220 aaKnown RBP21.63■■□□□ 1.05
CPNE1-204ENST00000397443 PENKP01210 267 aaPredicted RBP21.63■■□□□ 1.05
CPNE1-204ENST00000397443 ITGA8P53708 1063 aa21.63■■□□□ 1.05
CPNE1-204ENST00000397443 LMAN2Q12907 356 aa21.63■■□□□ 1.05
CPNE1-204ENST00000397443 CCNI2Q6ZMN8 369 aaPredicted RBP21.63■■□□□ 1.05
CPNE1-204ENST00000397443 LRRC49Q8IUZ0 686 aa21.63■■□□□ 1.05
CPNE1-204ENST00000397443 APCDD1Q8J025 514 aa21.63■■□□□ 1.05
CPNE1-204ENST00000397443 SEC14L1Q92503 715 aa21.63■■□□□ 1.05
CPNE1-204ENST00000397443 FEM1AQ9BSK4 669 aa21.63■■□□□ 1.05
CPNE1-204ENST00000397443 CHD5Q8TDI0 1954 aa21.63■■□□□ 1.05
CPNE1-204ENST00000397443 BHMG1C9JSJ3 638 aaPredicted RBP21.63■■□□□ 1.05
CPNE1-204ENST00000397443 ZBTB24O43167 697 aaPredicted RBP21.63■■□□□ 1.05
CPNE1-204ENST00000397443 MTSS1O43312 755 aa21.63■■□□□ 1.05
CPNE1-204ENST00000397443 METTL18O95568 372 aa21.63■■□□□ 1.05
CPNE1-204ENST00000397443 MFSD6LQ8IWD5 586 aa21.63■■□□□ 1.05
CPNE1-204ENST00000397443 LRRC45Q96CN5 670 aa21.63■■□□□ 1.05
CPNE1-204ENST00000397443 GDAP1L1Q96MZ0 367 aa21.63■■□□□ 1.05
CPNE1-204ENST00000397443 OBP2AQ9NY56 170 aa21.63■■□□□ 1.05
CPNE1-204ENST00000397443 RAB21Q9UL25 225 aa21.63■■□□□ 1.05
CPNE1-204ENST00000397443 HPCAL4Q9UM19 191 aa21.63■■□□□ 1.05
CPNE1-204ENST00000397443 OTOL1A6NHN0 477 aaPredicted RBP21.62■■□□□ 1.05
CPNE1-204ENST00000397443 TRIM24O15164 1050 aa21.62■■□□□ 1.05
CPNE1-204ENST00000397443 ADH5P11766 374 aa21.62■■□□□ 1.05
CPNE1-204ENST00000397443 SLC10A7Q0GE19 358 aa21.62■■□□□ 1.05
CPNE1-204ENST00000397443 CUL1Q13616 776 aa21.62■■□□□ 1.05
CPNE1-204ENST00000397443 TEX44Q53QW1 395 aa21.62■■□□□ 1.05
CPNE1-204ENST00000397443 LINGO4Q6UY18 593 aa21.62■■□□□ 1.05
CPNE1-204ENST00000397443 OTOP3Q7RTS5 596 aa21.62■■□□□ 1.05
CPNE1-204ENST00000397443 FIBINQ8TAL6 211 aa21.62■■□□□ 1.05
CPNE1-204ENST00000397443 FBXO25Q8TCJ0 367 aa21.62■■□□□ 1.05
CPNE1-204ENST00000397443 RBM22Q9NW64 420 aaKnown RBP eCLIP21.62■■□□□ 1.059e-7■■□□□ 12.8
CPNE1-204ENST00000397443 ANAPC5Q9UJX4 755 aa21.62■■□□□ 1.05
CPNE1-204ENST00000397443 GOLGA8MH3BSY2 632 aa21.61■■□□□ 1.05
CPNE1-204ENST00000397443 DNALI1O14645 258 aaPredicted RBP21.61■■□□□ 1.05
CPNE1-204ENST00000397443 PRAMEF11O60813 436 aa21.61■■□□□ 1.05
CPNE1-204ENST00000397443 ADH1CP00326 375 aa21.61■■□□□ 1.05
CPNE1-204ENST00000397443 MCM3P25205 808 aa21.61■■□□□ 1.05
CPNE1-204ENST00000397443 PSMB4P28070 264 aa21.61■■□□□ 1.05
CPNE1-204ENST00000397443 HLA-FP30511 346 aa21.61■■□□□ 1.05
CPNE1-204ENST00000397443 ZNF33AQ06730 810 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms