RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 NUMBLQ9Y6R0 609 aa14.58□□□□□ -0.08
MKS1-203ENST00000393120 FRMPD3Q5JV73 1810 aa14.58□□□□□ -0.08
MKS1-203ENST00000393120 OR6C75A6NL08 312 aa14.57□□□□□ -0.08
MKS1-203ENST00000393120 E9PAM4 449 aa14.57□□□□□ -0.08
MKS1-203ENST00000393120 MPOP05164 745 aa14.57□□□□□ -0.08
MKS1-203ENST00000393120 MYL2P10916 166 aa14.57□□□□□ -0.08
MKS1-203ENST00000393120 SERPINB8P50452 374 aa14.57□□□□□ -0.08
MKS1-203ENST00000393120 FASTKD1Q53R41 847 aaKnown RBP14.57□□□□□ -0.08
MKS1-203ENST00000393120 VARS2Q5ST30 1063 aaKnown RBP14.57□□□□□ -0.08
MKS1-203ENST00000393120 MBLAC2Q68D91 279 aa14.57□□□□□ -0.08
MKS1-203ENST00000393120 ARHGAP36Q6ZRI8 547 aa14.57□□□□□ -0.08
MKS1-203ENST00000393120 OTOP3Q7RTS5 596 aa14.57□□□□□ -0.08
MKS1-203ENST00000393120 CRLF3Q8IUI8 442 aa14.57□□□□□ -0.08
MKS1-203ENST00000393120 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.57□□□□□ -0.08
MKS1-203ENST00000393120 MFSD3Q96ES6 412 aa14.57□□□□□ -0.08
MKS1-203ENST00000393120 CHRAC1Q9NRG0 131 aa14.57□□□□□ -0.08
MKS1-203ENST00000393120 DONSONQ9NYP3 566 aa14.57□□□□□ -0.08
MKS1-203ENST00000393120 PPARGC1AQ9UBK2 798 aaKnown RBP14.57□□□□□ -0.08
MKS1-203ENST00000393120 MYO18AQ92614 2054 aaKnown RBP14.57□□□□□ -0.08
MKS1-203ENST00000393120 TIMM44O43615 452 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 ATP9BO43861 1147 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 HAUS5O94927 633 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 PROCP04070 461 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 PRKCGP05129 697 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 SELPP16109 830 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 GRK2P25098 689 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 PTPN4P29074 926 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 SERPINB3P29508 390 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 CDK7P50613 346 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 GEMP55040 296 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 CCDC153Q494R4 210 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 PCID2Q5JVF3 399 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 ACBD5Q5T8D3 534 aaPredicted RBP14.56□□□□□ -0.08
MKS1-203ENST00000393120 ICE2Q659A1 982 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 KCNMB4Q86W47 210 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 ZNF683Q8IZ20 524 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 UMODL1-AS1Q8N2C9 162 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 RAET1EQ8TD07 263 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 PTCD2Q8WV60 388 aaKnown RBP14.56□□□□□ -0.08
MKS1-203ENST00000393120 UTP4Q969X6 686 aaKnown RBP14.56□□□□□ -0.08
MKS1-203ENST00000393120 STARD7Q9NQZ5 370 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 CLIC5Q9NZA1 410 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 DNAJB4Q9UDY4 337 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 BAIAP2L1Q9UHR4 511 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 RPL26L1Q9UNX3 145 aaKnown RBP14.56□□□□□ -0.08
MKS1-203ENST00000393120 ARVCFO00192 962 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 AOC2O75106 756 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 WFS1O76024 890 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 CBX6O95503 412 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 ADRA1AP35348 466 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 ZBTB16Q05516 673 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 SMARCB1Q12824 385 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 DDR2Q16832 855 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 HSF5Q4G112 596 aaPredicted RBP14.56□□□□□ -0.08
MKS1-203ENST00000393120 HSP90AA5PQ58FG0 334 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 PDPK2PQ6A1A2 396 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 FSTL4Q6MZW2 842 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 PKN3Q6P5Z2 889 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 POTEHQ6S545 545 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 LRRC8DQ7L1W4 858 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 DCLK2Q8N568 766 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 CD99L2Q8TCZ2 262 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 PTCD3Q96EY7 689 aaKnown RBP14.56□□□□□ -0.08
MKS1-203ENST00000393120 AGAP2Q99490 1192 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 TBL1YQ9BQ87 522 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 ENTPD7Q9NQZ7 604 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 SNX15Q9NRS6 342 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 C20orf96Q9NUD7 363 aaPredicted RBP14.56□□□□□ -0.08
MKS1-203ENST00000393120 COMMD8Q9NX08 183 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 PHF24Q9UPV7 400 aa14.56□□□□□ -0.08
MKS1-203ENST00000393120 PRG3Q9Y2Y8 225 aaPredicted RBP14.56□□□□□ -0.08
MKS1-203ENST00000393120 ENPP3O14638 875 aa14.55□□□□□ -0.08
MKS1-203ENST00000393120 TOP3BO95985 862 aaKnown RBP14.55□□□□□ -0.08
MKS1-203ENST00000393120 SERPINE1P05121 402 aa14.55□□□□□ -0.08
MKS1-203ENST00000393120 FGF3P11487 239 aaPredicted RBP14.55□□□□□ -0.08
MKS1-203ENST00000393120 RHOQP17081 205 aa14.55□□□□□ -0.08
MKS1-203ENST00000393120 FGFR3P22607 806 aa14.55□□□□□ -0.08
MKS1-203ENST00000393120 PSEN1P49768 467 aa14.55□□□□□ -0.08
MKS1-203ENST00000393120 CSRP3P50461 194 aa14.55□□□□□ -0.08
MKS1-203ENST00000393120 NDST2P52849 883 aa14.55□□□□□ -0.08
MKS1-203ENST00000393120 TBX4P57082 545 aa14.55□□□□□ -0.08
MKS1-203ENST00000393120 MPP3Q13368 585 aa14.55□□□□□ -0.08
MKS1-203ENST00000393120 ANO4Q32M45 955 aa14.55□□□□□ -0.08
MKS1-203ENST00000393120 CTXN3Q4LDR2 81 aa14.55□□□□□ -0.08
MKS1-203ENST00000393120 DENND5AQ6IQ26 1287 aa14.55□□□□□ -0.08
MKS1-203ENST00000393120 C16orf46Q6P387 395 aa14.55□□□□□ -0.08
MKS1-203ENST00000393120 C14orf80Q86SX3 495 aa14.55□□□□□ -0.08
MKS1-203ENST00000393120 ARID3BQ8IVW6 561 aaPredicted RBP14.55□□□□□ -0.08
MKS1-203ENST00000393120 NSL1Q96IY1 281 aa14.55□□□□□ -0.08
MKS1-203ENST00000393120 APOL2Q9BQE5 337 aa14.55□□□□□ -0.08
MKS1-203ENST00000393120 C20orf27Q9GZN8 174 aa14.55□□□□□ -0.08
MKS1-203ENST00000393120 WWP1Q9H0M0 922 aa14.55□□□□□ -0.08
MKS1-203ENST00000393120 MRM3Q9HC36 420 aaKnown RBP14.55□□□□□ -0.08
MKS1-203ENST00000393120 CD248Q9HCU0 757 aa14.55□□□□□ -0.08
MKS1-203ENST00000393120 PRDM5Q9NQX1 630 aaPredicted RBP14.55□□□□□ -0.08
MKS1-203ENST00000393120 OLA1Q9NTK5 396 aaKnown RBP14.55□□□□□ -0.08
MKS1-203ENST00000393120 UBP1Q9NZI7 540 aa14.55□□□□□ -0.08
MKS1-203ENST00000393120 IL1RAPL1Q9NZN1 696 aa14.55□□□□□ -0.08
MKS1-203ENST00000393120 HBS1LQ9Y450 684 aaKnown RBP14.55□□□□□ -0.08
MKS1-203ENST00000393120 CCDC22O60826 627 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms